RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W CSH1P38287 376 aa3.49□□□□□ -1.85
PRP40YKL012W SLM6P38343 150 aa3.49□□□□□ -1.85
PRP40YKL012W VMA7P39111 118 aa3.49□□□□□ -1.85
PRP40YKL012W YNL200CP40165 246 aaKnown RBP3.49□□□□□ -1.85
PRP40YKL012W CUP9P41817 306 aa3.49□□□□□ -1.85
PRP40YKL012W UBI4P0CG63 381 aaKnown RBP3.48□□□□□ -1.85
PRP40YKL012W GPA2P10823 449 aa3.48□□□□□ -1.85
PRP40YKL012W DSE2P38844 325 aa3.48□□□□□ -1.85
PRP40YKL012W TVP23P38962 199 aa3.48□□□□□ -1.85
PRP40YKL012W SPC25P40014 221 aa3.48□□□□□ -1.85
PRP40YKL012W HPM1P40481 377 aa3.48□□□□□ -1.85
PRP40YKL012W PHB1P40961 287 aa3.48□□□□□ -1.85
PRP40YKL012W NQM1P53228 333 aaPredicted RBP3.48□□□□□ -1.85
PRP40YKL012W IDP1P21954 428 aaKnown RBP3.48□□□□□ -1.85
PRP40YKL012W SRP102P36057 244 aaPredicted RBP3.48□□□□□ -1.85
PRP40YKL012W FYV12Q08559 129 aa3.48□□□□□ -1.85
PRP40YKL012W BUB2P26448 306 aaPredicted RBP3.47□□□□□ -1.85
PRP40YKL012W CPR5P35176 225 aa3.47□□□□□ -1.85
PRP40YKL012W NSA2P40078 261 aaKnown RBP3.47□□□□□ -1.85
PRP40YKL012W YER137CP40083 148 aaKnown RBP3.47□□□□□ -1.85
PRP40YKL012W PEP8P40335 379 aa3.47□□□□□ -1.85
PRP40YKL012W DIG2Q03373 323 aaKnown RBP3.47□□□□□ -1.85
PRP40YKL012W CUE4Q04201 117 aaPredicted RBP3.47□□□□□ -1.85
PRP40YKL012W YMR253CQ04835 414 aa3.47□□□□□ -1.85
PRP40YKL012W ATP20Q12233 115 aa3.47□□□□□ -1.85
PRP40YKL012W YOR214CQ12282 236 aa3.47□□□□□ -1.85
PRP40YKL012W NRG2P38082 220 aa3.46□□□□□ -1.86
PRP40YKL012W FYV4P38783 130 aaPredicted RBP3.46□□□□□ -1.86
PRP40YKL012W RCF2P53721 224 aa3.46□□□□□ -1.86
PRP40YKL012W POP3P53833 195 aaPredicted RBP3.46□□□□□ -1.86
PRP40YKL012W GAL83Q04739 417 aa3.46□□□□□ -1.86
PRP40YKL012W IRC23Q08416 157 aa3.46□□□□□ -1.86
PRP40YKL012W YLR046CQ12253 270 aa3.46□□□□□ -1.86
PRP40YKL012W RTR2Q12378 196 aa3.46□□□□□ -1.86
PRP40YKL012W PHO85P17157 305 aa3.46□□□□□ -1.86
PRP40YKL012W PAM17P36147 197 aa3.46□□□□□ -1.86
PRP40YKL012W SBH1P52870 82 aa3.46□□□□□ -1.86
PRP40YKL012W TIM13P53299 105 aa3.46□□□□□ -1.86
PRP40YKL012W SAY1P53324 424 aa3.46□□□□□ -1.86
PRP40YKL012W GTT2Q12390 233 aa3.46□□□□□ -1.86
PRP40YKL012W KNH1P50112 268 aa3.45□□□□□ -1.86
PRP40YKL012W LSM3P57743 89 aaKnown RBP3.45□□□□□ -1.86
PRP40YKL012W YDC1Q02896 317 aa3.44□□□□□ -1.86
PRP40YKL012W RRP17Q04031 235 aaPredicted RBP3.44□□□□□ -1.86
PRP40YKL012W RAD28Q12021 506 aa3.44□□□□□ -1.86
PRP40YKL012W MED11Q99278 115 aa3.44□□□□□ -1.86
PRP40YKL012W MDH2P22133 377 aa3.43□□□□□ -1.86
PRP40YKL012W ECM31P38122 312 aa3.43□□□□□ -1.86
PRP40YKL012W LSM1P47017 172 aaKnown RBP3.43□□□□□ -1.86
PRP40YKL012W APS3P47064 194 aa3.43□□□□□ -1.86
PRP40YKL012W MOG1P47123 218 aa3.43□□□□□ -1.86
PRP40YKL012W YMR030W-AQ3E760 96 aa3.43□□□□□ -1.86
PRP40YKL012W BOL1Q3E793 110 aa3.43□□□□□ -1.86
PRP40YKL012W PET54P10834 293 aa3.43□□□□□ -1.86
PRP40YKL012W SEC11P15367 167 aa3.43□□□□□ -1.86
PRP40YKL012W STP22P25604 385 aa3.43□□□□□ -1.86
PRP40YKL012W UBC8P28263 218 aa3.43□□□□□ -1.86
PRP40YKL012W ACP1P32463 125 aa3.43□□□□□ -1.86
PRP40YKL012W PTC1P35182 281 aa3.43□□□□□ -1.86
PRP40YKL012W IPI1P38803 334 aaPredicted RBP3.43□□□□□ -1.86
PRP40YKL012W YNL033WP53964 284 aa3.43□□□□□ -1.86
PRP40YKL012W YNL019CP53975 284 aa3.43□□□□□ -1.86
PRP40YKL012W YHR086W-AQ3E746 53 aa3.43□□□□□ -1.86
PRP40YKL012W VPS13Q07878 3144 aa3.42□□□□□ -1.86
PRP40YKL012W PBI2P0CT04 75 aaKnown RBP3.42□□□□□ -1.86
PRP40YKL012W RPL2AP0CX45 254 aaKnown RBP3.42□□□□□ -1.86
PRP40YKL012W RPL2BP0CX46 254 aaKnown RBP3.42□□□□□ -1.86
PRP40YKL012W CYC2P38909 366 aa3.42□□□□□ -1.86
PRP40YKL012W APQ12P40532 138 aa3.42□□□□□ -1.86
PRP40YKL012W BUD25P85052 153 aa3.42□□□□□ -1.86
PRP40YKL012W VPS28Q02767 242 aa3.42□□□□□ -1.86
PRP40YKL012W MZM1Q03429 123 aaPredicted RBP3.42□□□□□ -1.86
PRP40YKL012W YOR289WQ12012 251 aaPredicted RBP3.42□□□□□ -1.86
PRP40YKL012W YGL041W-AP0C5N3 154 aa3.41□□□□□ -1.86
PRP40YKL012W PEX34P25584 144 aa3.41□□□□□ -1.86
PRP40YKL012W YBR220CP38318 560 aa3.41□□□□□ -1.86
PRP40YKL012W AIM18P38884 321 aa3.41□□□□□ -1.86
PRP40YKL012W AYR1P40471 297 aa3.41□□□□□ -1.86
PRP40YKL012W GLR1P41921 483 aaKnown RBP3.41□□□□□ -1.86
PRP40YKL012W RPS12P48589 143 aaKnown RBP3.41□□□□□ -1.86
PRP40YKL012W ANT1Q06497 328 aa3.41□□□□□ -1.86
PRP40YKL012W UBR1P19812 1950 aa3.41□□□□□ -1.86
PRP40YKL012W SPT14P32363 452 aa3.4□□□□□ -1.86
PRP40YKL012W RRT1P38192 103 aa3.4□□□□□ -1.86
PRP40YKL012W DLS1P40366 167 aa3.4□□□□□ -1.86
PRP40YKL012W HYM1P32464 399 aa3.4□□□□□ -1.87
PRP40YKL012W IPT1P38954 527 aa3.4□□□□□ -1.87
PRP40YKL012W YHR213W-AQ8TGT4 77 aa3.4□□□□□ -1.87
PRP40YKL012W YLR422WQ06409 1932 aa3.39□□□□□ -1.87
PRP40YKL012W GRX5Q02784 150 aa3.39□□□□□ -1.87
PRP40YKL012W RNH202Q05635 350 aa3.39□□□□□ -1.87
PRP40YKL012W ATP14Q12349 124 aa3.39□□□□□ -1.87
PRP40YKL012W MHF1Q3E835 90 aa3.39□□□□□ -1.87
PRP40YKL012W RPL30P14120 105 aaKnown RBP3.38□□□□□ -1.87
PRP40YKL012W SOK1P40317 901 aa3.38□□□□□ -1.87
PRP40YKL012W LSM8P47093 109 aaKnown RBP3.38□□□□□ -1.87
PRP40YKL012W CSN9Q03981 162 aa3.38□□□□□ -1.87
PRP40YKL012W YPR174CQ06616 221 aaPredicted RBP3.38□□□□□ -1.87
PRP40YKL012W YBL010CP32788 280 aa3.38□□□□□ -1.87
PRP40YKL012W YPL073CP40323 161 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms