RNA–Protein interactions for RNA: YGL222C

EDC1, Transcript of RNA-binding protein that activates mRNA decapping directly, yeast

Gene EDC1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EDC1	YGL222C	YNL122C	P53921	115 aa	Predicted RBP	1.23	□□□□□ -2.21
EDC1	YGL222C	MRS4	P23500	304 aa		1.22	□□□□□ -2.21
EDC1	YGL222C	HHY1	P39982	102 aa		1.22	□□□□□ -2.21
EDC1	YGL222C	APQ12	P40532	138 aa		1.22	□□□□□ -2.21
EDC1	YGL222C	ATG8	P38182	117 aa	RIP-Chip data	1.21	□□□□□ -2.22	not detected
EDC1	YGL222C	HAP2	P06774	265 aa		1.2	□□□□□ -2.22
EDC1	YGL222C	IPT1	P38954	527 aa		1.2	□□□□□ -2.22
EDC1	YGL222C	PBI2	P0CT04	75 aa	Known RBP	1.19	□□□□□ -2.22
EDC1	YGL222C	FIP1	P45976	327 aa		1.19	□□□□□ -2.22
EDC1	YGL222C	ATP19	P81451	68 aa		1.19	□□□□□ -2.22
EDC1	YGL222C	YPR202W	Q08993	238 aa		1.19	□□□□□ -2.22
EDC1	YGL222C	SRP21	P32342	167 aa		1.18	□□□□□ -2.22
EDC1	YGL222C	SLM6	P38343	150 aa		1.18	□□□□□ -2.22
EDC1	YGL222C	IRC19	Q07843	230 aa		1.18	□□□□□ -2.22
EDC1	YGL222C	RFU1	Q08003	200 aa		1.18	□□□□□ -2.22
EDC1	YGL222C	ROM2	P51862	1356 aa	Known RBP	1.18	□□□□□ -2.22
EDC1	YGL222C	RPS22A	P0C0W1	130 aa	Known RBP	1.17	□□□□□ -2.22
EDC1	YGL222C	PEX34	P25584	144 aa		1.17	□□□□□ -2.22
EDC1	YGL222C	MGR2	Q02889	113 aa		1.17	□□□□□ -2.22
EDC1	YGL222C	RRT7	Q07829	113 aa		1.17	□□□□□ -2.22
EDC1	YGL222C	RPS22B	Q3E7Y3	130 aa	Known RBP	1.17	□□□□□ -2.22
EDC1	YGL222C	RPS28B	P0C0X0	67 aa	Known RBP	1.16	□□□□□ -2.22
EDC1	YGL222C	BUB2	P26448	306 aa	Predicted RBP	1.16	□□□□□ -2.22
EDC1	YGL222C	AME1	P38313	324 aa		1.16	□□□□□ -2.22
EDC1	YGL222C	NSL1	Q12143	216 aa		1.16	□□□□□ -2.22
EDC1	YGL222C	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.16	□□□□□ -2.22
EDC1	YGL222C	RIF1	P29539	1916 aa		1.16	□□□□□ -2.22
EDC1	YGL222C	YER181C	P40097	107 aa		1.15	□□□□□ -2.23
EDC1	YGL222C	SED1	Q01589	338 aa		1.15	□□□□□ -2.23
EDC1	YGL222C	RIB3	Q99258	208 aa		1.15	□□□□□ -2.23
EDC1	YGL222C	YPR153W	Q06537	140 aa		1.14	□□□□□ -2.23
EDC1	YGL222C	GPI11	Q06636	219 aa		1.14	□□□□□ -2.23
EDC1	YGL222C	EFG1	Q3E705	233 aa	Known RBP	1.14	□□□□□ -2.23
EDC1	YGL222C	RPL33A	P05744	107 aa	Known RBP	1.13	□□□□□ -2.23
EDC1	YGL222C	PHO13	P19881	312 aa		1.13	□□□□□ -2.23
EDC1	YGL222C	GPI2	P46961	280 aa		1.13	□□□□□ -2.23
EDC1	YGL222C	SEN15	Q04675	128 aa		1.13	□□□□□ -2.23
EDC1	YGL222C	PRM3	Q08931	133 aa		1.13	□□□□□ -2.23
EDC1	YGL222C	HFA1	P32874	2273 aa		1.12	□□□□□ -2.23
EDC1	YGL222C	MRPL24	P36525	258 aa	Predicted RBP	1.11	□□□□□ -2.23
EDC1	YGL222C	DER1	P38307	211 aa		1.11	□□□□□ -2.23
EDC1	YGL222C	VMA10	P48836	114 aa	Known RBP	1.11	□□□□□ -2.23
EDC1	YGL222C	SCS22	Q6Q595	175 aa		1.11	□□□□□ -2.23
EDC1	YGL222C	HSL1	P34244	1518 aa		1.1	□□□□□ -2.23
EDC1	YGL222C	NHP6A	P11632	93 aa	Known RBP	1.09	□□□□□ -2.23
EDC1	YGL222C	YJL218W	P40892	196 aa	Known RBP	1.09	□□□□□ -2.23
EDC1	YGL222C	DDR48	P18899	430 aa	Known RBP	1.08	□□□□□ -2.24
EDC1	YGL222C	IRC21	Q04772	201 aa		1.08	□□□□□ -2.24
EDC1	YGL222C	YMR141C	P40211	102 aa		1.07	□□□□□ -2.24
EDC1	YGL222C	YJL009W	P47078	108 aa		1.07	□□□□□ -2.24
EDC1	YGL222C	MHF1	Q3E835	90 aa		1.06	□□□□□ -2.24
EDC1	YGL222C	SRL3	P36167	246 aa		1.05	□□□□□ -2.24
EDC1	YGL222C	DIE2	P50076	525 aa		1.05	□□□□□ -2.24
EDC1	YGL222C	EST3	Q03096	181 aa		1.05	□□□□□ -2.24
EDC1	YGL222C	HUT1	Q12520	339 aa		1.05	□□□□□ -2.24
EDC1	YGL222C	YGL014C-A	P0C5N1	53 aa		1.02	□□□□□ -2.25
EDC1	YGL222C	YHR140W	P38842	239 aa		1.01	□□□□□ -2.25
EDC1	YGL222C	COX5B	P00425	151 aa		1	□□□□□ -2.25
EDC1	YGL222C	RPL43A	P0CX25	92 aa	Known RBP	1	□□□□□ -2.25
EDC1	YGL222C	RPL43B	P0CX26	92 aa		1	□□□□□ -2.25
EDC1	YGL222C	HSP12	P22943	109 aa	Known RBP	1	□□□□□ -2.25
EDC1	YGL222C	FIG1	P38224	298 aa		1	□□□□□ -2.25
EDC1	YGL222C	TLG1	Q03322	224 aa		0.98	□□□□□ -2.25
EDC1	YGL222C	YMR122C	Q03879	124 aa		0.98	□□□□□ -2.25
EDC1	YGL222C	RME1	P32338	300 aa	Known RBP	0.97	□□□□□ -2.25
EDC1	YGL222C	YCL001W-A	P87012	153 aa		0.97	□□□□□ -2.25
EDC1	YGL222C	KTI11	Q3E840	82 aa		0.97	□□□□□ -2.25
EDC1	YGL222C	COA6	Q3E846	104 aa		0.97	□□□□□ -2.25
EDC1	YGL222C	FYV5	P25585	152 aa		0.96	□□□□□ -2.26
EDC1	YGL222C	YNL019C	P53975	284 aa		0.96	□□□□□ -2.26
EDC1	YGL222C	RAV2	Q03956	351 aa		0.96	□□□□□ -2.26
EDC1	YGL222C	PET20	Q99373	253 aa		0.96	□□□□□ -2.26
EDC1	YGL222C	RPS1B	P23248	255 aa	Known RBP	0.95	□□□□□ -2.26
EDC1	YGL222C	PRP8	P33334	2413 aa	Known RBP	0.94	□□□□□ -2.26
EDC1	YGL222C	MVB12	P42939	101 aa		0.94	□□□□□ -2.26
EDC1	YGL222C	YLR307C-A	Q3E825	87 aa		0.94	□□□□□ -2.26
EDC1	YGL222C	LST8	P41318	303 aa		0.93	□□□□□ -2.26
EDC1	YGL222C	PKR1	Q03880	122 aa	Known RBP	0.93	□□□□□ -2.26
EDC1	YGL222C	ANB1	P19211	157 aa		0.91	□□□□□ -2.26
EDC1	YGL222C	YGR201C	P42936	225 aa		0.91	□□□□□ -2.26
EDC1	YGL222C	SOM1	Q05676	74 aa		0.91	□□□□□ -2.26
EDC1	YGL222C	RAF1	Q06891	181 aa		0.91	□□□□□ -2.26
EDC1	YGL222C	FUN14	P18411	198 aa		0.9	□□□□□ -2.27
EDC1	YGL222C	IPI1	P38803	334 aa	Predicted RBP	0.9	□□□□□ -2.27
EDC1	YGL222C	PHB1	P40961	287 aa		0.9	□□□□□ -2.27
EDC1	YGL222C	NAT5	Q08689	176 aa		0.9	□□□□□ -2.27
EDC1	YGL222C	YLR157W-E	P0CF00	54 aa		0.89	□□□□□ -2.27
EDC1	YGL222C	YHR213W	P0CI67	198 aa		0.89	□□□□□ -2.27
EDC1	YGL222C	LSM1	P47017	172 aa	Known RBP	0.89	□□□□□ -2.27
EDC1	YGL222C	COA4	Q05809	96 aa		0.89	□□□□□ -2.27
EDC1	YGL222C	DDP1	Q99321	188 aa	Known RBP	0.89	□□□□□ -2.27
EDC1	YGL222C	CDC39	P25655	2108 aa	Known RBP	0.89	□□□□□ -2.27
EDC1	YGL222C	NMT1	P14743	455 aa		0.88	□□□□□ -2.27
EDC1	YGL222C	LSM8	P47093	109 aa	Known RBP	0.88	□□□□□ -2.27
EDC1	YGL222C	HUG1	Q6Q5K6	68 aa		0.88	□□□□□ -2.27
EDC1	YGL222C	SUI1	P32911	108 aa	Known RBP	0.87	□□□□□ -2.27
EDC1	YGL222C	PET54	P10834	293 aa		0.86	□□□□□ -2.27
EDC1	YGL222C	SPG1	P50088	95 aa		0.86	□□□□□ -2.27
EDC1	YGL222C	YDR366C	P87287	132 aa		0.86	□□□□□ -2.27
EDC1	YGL222C	YMR321C	Q04898	105 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms