RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC4	YFL009W	QRI5	P32344	111 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YKL044W	P36092	106 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	BRP1	P53194	125 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	CPD1	P53314	239 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	MCH4	Q08268	501 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	ERG8	P24521	451 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YBL059W	P34224	193 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YPT10	P38146	199 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YBR090C	P38253	122 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	OXA1	P39952	402 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YER121W	P40076	114 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YGR269W	P40326	108 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	DFG10	P40526	253 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YCH1	P42937	148 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	UBC7	Q02159	165 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	PAM18	Q07914	168 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	VPS68	Q12016	184 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	USV1	Q12132	391 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	YDL180W	Q12301	547 aa		4.2	□□□□□ -1.74
CDC4	YFL009W	OSW5	P40219	148 aa		4.19	□□□□□ -1.74
CDC4	YFL009W	ERG13	P54839	491 aa	Known RBP	4.19	□□□□□ -1.74
CDC4	YFL009W	ECM18	Q04623	453 aa		4.19	□□□□□ -1.74
CDC4	YFL009W	RLM1	Q12224	676 aa		4.19	□□□□□ -1.74
CDC4	YFL009W	SUT2	Q12286	268 aa		4.19	□□□□□ -1.74
CDC4	YFL009W	HUG1	Q6Q5K6	68 aa		4.19	□□□□□ -1.74
CDC4	YFL009W	YBR121C-A	P0C5L4	52 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	CPT1	P17898	393 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YFR054C	P43622	192 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YMR007W	Q03675	126 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	MIM1	Q08176	113 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	COX17	Q12287	69 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	CYC3	P06182	269 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	SRX1	P36077	127 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YHR180W	P38868	163 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YER085C	P40058	173 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YIL163C	P40448	117 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	POP3	P53833	195 aa	Predicted RBP	4.18	□□□□□ -1.74
CDC4	YFL009W	SWT21	P53873	357 aa	Predicted RBP	4.18	□□□□□ -1.74
CDC4	YFL009W	UTP23	Q12339	254 aa	Known RBP	4.18	□□□□□ -1.74
CDC4	YFL009W	JID1	Q12350	301 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YOR343C	Q12484	108 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	YBR255C-A	Q3E776	120 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	HTL1	Q9URQ5	78 aa		4.18	□□□□□ -1.74
CDC4	YFL009W	CUP2	P15315	225 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	NHP2	P32495	156 aa	Predicted RBP	4.17	□□□□□ -1.74
CDC4	YFL009W	ATF1	P40353	525 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	CUP9	P41817	306 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	NCE101	Q02820	53 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	YPR108W-A	Q3E7B3	70 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	TAD3	Q9URQ3	322 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	CDC43	P18898	376 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	RPA12	P32529	125 aa	Known RBP	4.17	□□□□□ -1.74
CDC4	YFL009W	TDA4	P47153	279 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	CRZ1	P53968	678 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	TIM10	P87108	93 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	MIX17	Q03667	156 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	DIC1	Q06143	298 aa		4.17	□□□□□ -1.74
CDC4	YFL009W	POC4	Q12245	148 aa	Predicted RBP	4.17	□□□□□ -1.74
CDC4	YFL009W	YER076C	P40049	302 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	ATP19	P81451	68 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	ARC18	Q05933	178 aa	Known RBP	4.16	□□□□□ -1.74
CDC4	YFL009W	GEP3	Q08622	556 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	YRA1	Q12159	226 aa	Known RBP	4.16	□□□□□ -1.74
CDC4	YFL009W	TOA2	P32774	122 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	MOH1	P38191	138 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	SNF11	P38956	169 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	YDL218W	Q07629	317 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	GRE1	Q08969	168 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	RFM1	Q12192	310 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	YDR524C-B	Q3E6R4	66 aa		4.16	□□□□□ -1.74
CDC4	YFL009W	MRPL20	P22354	195 aa	Predicted RBP	4.15	□□□□□ -1.74
CDC4	YFL009W	YKR041W	P36134	250 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	MIC12	P38341	106 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	MST28	P39552	234 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	CCS1	P40202	249 aa	Known RBP	4.15	□□□□□ -1.74
CDC4	YFL009W	YPL073C	P40323	161 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	SAS2	P40963	338 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	HPA2	Q06592	156 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	AYT1	Q12226	474 aa		4.15	□□□□□ -1.74
CDC4	YFL009W	MDM10	P18409	493 aa		4.15	□□□□□ -1.75
CDC4	YFL009W	YNL200C	P40165	246 aa	Known RBP	4.15	□□□□□ -1.75
CDC4	YFL009W	CTK2	P46962	323 aa		4.15	□□□□□ -1.75
CDC4	YFL009W	YJL118W	P47022	219 aa		4.15	□□□□□ -1.75
CDC4	YFL009W	AIM34	Q03673	198 aa		4.15	□□□□□ -1.75
CDC4	YFL009W	NUP53	Q03790	475 aa		4.15	□□□□□ -1.75
CDC4	YFL009W	MPD1	Q12404	318 aa	Known RBP	4.15	□□□□□ -1.75
CDC4	YFL009W	VMA11	P32842	164 aa		4.14	□□□□□ -1.75
CDC4	YFL009W	YGP1	P38616	354 aa	Known RBP	4.14	□□□□□ -1.75
CDC4	YFL009W	DSK2	P48510	373 aa		4.14	□□□□□ -1.75
CDC4	YFL009W	COX12	Q01519	83 aa		4.14	□□□□□ -1.75
CDC4	YFL009W	YFL041W-A	Q3E817	63 aa		4.14	□□□□□ -1.75
CDC4	YFL009W	UBC5	P15732	148 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	YER181C	P40097	107 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	YIP5	P53108	310 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	YGR050C	P53231	118 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	ABF2	Q02486	183 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	MDM35	O60200	86 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	YER039C-A	P0CD97	72 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	MRPS5	P33759	307 aa		4.13	□□□□□ -1.75
CDC4	YFL009W	FMP46	P36141	133 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms