RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SPC3	Q12133	184 aa		1.12	□□□□□ -2.23
DOT6	YER088C	CMC2	Q3E7A4	109 aa		1.12	□□□□□ -2.23
DOT6	YER088C	KIN28	P06242	306 aa		1.11	□□□□□ -2.23
DOT6	YER088C	FBA1	P14540	359 aa	Known RBP	1.11	□□□□□ -2.23
DOT6	YER088C	OAC1	P32332	324 aa		1.11	□□□□□ -2.23
DOT6	YER088C	MSA2	P36157	363 aa		1.11	□□□□□ -2.23
DOT6	YER088C	DOG2	P38773	246 aa		1.11	□□□□□ -2.23
DOT6	YER088C	IPT1	P38954	527 aa		1.11	□□□□□ -2.23
DOT6	YER088C	GAT4	P40569	121 aa		1.11	□□□□□ -2.23
DOT6	YER088C	TTI2	P47168	421 aa		1.11	□□□□□ -2.23
DOT6	YER088C	ERG25	P53045	309 aa		1.11	□□□□□ -2.23
DOT6	YER088C	YGL159W	P53110	370 aa		1.11	□□□□□ -2.23
DOT6	YER088C	NRK1	P53915	240 aa		1.11	□□□□□ -2.23
DOT6	YER088C	DYN3	Q04949	312 aa		1.11	□□□□□ -2.23
DOT6	YER088C	RPL25	P04456	142 aa	Known RBP	1.11	□□□□□ -2.23
DOT6	YER088C	YHR032W-A	P0C5N6	59 aa		1.11	□□□□□ -2.23
DOT6	YER088C	FCY2	P17064	533 aa		1.11	□□□□□ -2.23
DOT6	YER088C	ATG22	P25568	528 aa		1.11	□□□□□ -2.23
DOT6	YER088C	HYM1	P32464	399 aa		1.11	□□□□□ -2.23
DOT6	YER088C	SRY1	P36007	326 aa		1.11	□□□□□ -2.23
DOT6	YER088C	MRPL28	P36527	147 aa		1.11	□□□□□ -2.23
DOT6	YER088C	SHG1	P38337	142 aa		1.11	□□□□□ -2.23
DOT6	YER088C	RPS20	P38701	121 aa	Known RBP	1.11	□□□□□ -2.23
DOT6	YER088C	RFC2	P40348	353 aa		1.11	□□□□□ -2.23
DOT6	YER088C	ARC15	P40518	154 aa	RIP-Chip data	1.11	□□□□□ -2.23	not detected
DOT6	YER088C	YJR056C	P47115	236 aa		1.11	□□□□□ -2.23
DOT6	YER088C	DID2	P69771	204 aa		1.11	□□□□□ -2.23
DOT6	YER088C	GAL83	Q04739	417 aa		1.11	□□□□□ -2.23
DOT6	YER088C	ATO3	Q12359	275 aa		1.11	□□□□□ -2.23
DOT6	YER088C	MPD1	Q12404	318 aa	Known RBP	1.11	□□□□□ -2.23
DOT6	YER088C	YPR170W-B	P0C5R9	85 aa		1.1	□□□□□ -2.23
DOT6	YER088C	ECM4	P36156	370 aa		1.1	□□□□□ -2.23
DOT6	YER088C	SRL3	P36167	246 aa		1.1	□□□□□ -2.23
DOT6	YER088C	SKG1	P36169	355 aa		1.1	□□□□□ -2.23
DOT6	YER088C	RPF1	P38805	295 aa	Known RBP	1.1	□□□□□ -2.23
DOT6	YER088C	YHR125W	P38831	101 aa		1.1	□□□□□ -2.23
DOT6	YER088C	RIO2	P40160	425 aa	Known RBP	1.1	□□□□□ -2.23
DOT6	YER088C	YGR026W	P53217	278 aa		1.1	□□□□□ -2.23
DOT6	YER088C	YNL033W	P53964	284 aa		1.1	□□□□□ -2.23
DOT6	YER088C	YNL019C	P53975	284 aa		1.1	□□□□□ -2.23
DOT6	YER088C	ELP6	Q04868	273 aa		1.1	□□□□□ -2.23
DOT6	YER088C	FCY1	Q12178	158 aa		1.1	□□□□□ -2.23
DOT6	YER088C	YHR139C-A	O13536	103 aa		1.1	□□□□□ -2.23
DOT6	YER088C	STF2	P16965	84 aa		1.1	□□□□□ -2.23
DOT6	YER088C	YCR101C	P25607	182 aa		1.1	□□□□□ -2.23
DOT6	YER088C	PEX4	P29340	183 aa		1.1	□□□□□ -2.23
DOT6	YER088C	OCH1	P31755	480 aa		1.1	□□□□□ -2.23
DOT6	YER088C	TFC1	P32367	649 aa		1.1	□□□□□ -2.23
DOT6	YER088C	ECM33	P38248	429 aa	Known RBP	1.1	□□□□□ -2.23
DOT6	YER088C	CCS1	P40202	249 aa	Known RBP	1.1	□□□□□ -2.23
DOT6	YER088C	DAD3	P69850	94 aa		1.1	□□□□□ -2.23
DOT6	YER088C	GIM5	Q04493	163 aa		1.1	□□□□□ -2.23
DOT6	YER088C	NEJ1	Q06148	342 aa		1.1	□□□□□ -2.23
DOT6	YER088C	ATG39	Q06159	398 aa		1.1	□□□□□ -2.23
DOT6	YER088C	GPI11	Q06636	219 aa		1.1	□□□□□ -2.23
DOT6	YER088C	YNG1	Q08465	219 aa		1.1	□□□□□ -2.23
DOT6	YER088C	ADK1	P07170	222 aa	Known RBP	1.09	□□□□□ -2.24
DOT6	YER088C	PUT1	P09368	476 aa		1.09	□□□□□ -2.24
DOT6	YER088C	MAG1	P22134	296 aa	Known RBP	1.09	□□□□□ -2.24
DOT6	YER088C	POG1	P40473	351 aa		1.09	□□□□□ -2.24
DOT6	YER088C	HPM1	P40481	377 aa		1.09	□□□□□ -2.24
DOT6	YER088C	TIR3	P40552	269 aa		1.09	□□□□□ -2.24
DOT6	YER088C	YJL218W	P40892	196 aa	Known RBP	1.09	□□□□□ -2.24
DOT6	YER088C	NQM1	P53228	333 aa	Predicted RBP	1.09	□□□□□ -2.24
DOT6	YER088C	YGR219W	P53307	113 aa		1.09	□□□□□ -2.24
DOT6	YER088C	PGA1	P53896	198 aa		1.09	□□□□□ -2.24
DOT6	YER088C	LSM7	P53905	115 aa	Known RBP	1.09	□□□□□ -2.24
DOT6	YER088C	YMR099C	Q03161	297 aa	Known RBP	1.09	□□□□□ -2.24
DOT6	YER088C	LPP1	Q04396	274 aa		1.09	□□□□□ -2.24
DOT6	YER088C	NOC4	Q06512	552 aa	Predicted RBP	1.09	□□□□□ -2.24
DOT6	YER088C	IGO2	Q9P305	131 aa		1.09	□□□□□ -2.24
DOT6	YER088C	RPL9A	P05738	191 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	SEC4	P07560	215 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	TRR1	P29509	319 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	FMP23	P38231	175 aa		1.08	□□□□□ -2.24
DOT6	YER088C	SRP14	P38985	146 aa		1.08	□□□□□ -2.24
DOT6	YER088C	PDS1	P40316	373 aa	Predicted RBP	1.08	□□□□□ -2.24
DOT6	YER088C	DLS1	P40366	167 aa		1.08	□□□□□ -2.24
DOT6	YER088C	ERJ5	P43613	295 aa	Predicted RBP	1.08	□□□□□ -2.24
DOT6	YER088C	AIM25	P47140	327 aa		1.08	□□□□□ -2.24
DOT6	YER088C	RPL9B	P51401	191 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	HSK3	P69852	69 aa		1.08	□□□□□ -2.24
DOT6	YER088C	COX12	Q01519	83 aa		1.08	□□□□□ -2.24
DOT6	YER088C	DGK1	Q12382	290 aa		1.08	□□□□□ -2.24
DOT6	YER088C	TDA8	Q6B2U8	126 aa		1.08	□□□□□ -2.24
DOT6	YER088C	ATG40	Q99325	256 aa		1.08	□□□□□ -2.24
DOT6	YER088C	CDC7	P06243	507 aa		1.08	□□□□□ -2.24
DOT6	YER088C	MRS1	P07266	363 aa		1.08	□□□□□ -2.24
DOT6	YER088C	ARO7	P32178	256 aa		1.08	□□□□□ -2.24
DOT6	YER088C	UTP30	P36144	274 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	YMR315W	Q04869	349 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	YPD1	Q07688	167 aa		1.08	□□□□□ -2.24
DOT6	YER088C	YDL085C-A	Q3E7B7	68 aa	Known RBP	1.08	□□□□□ -2.24
DOT6	YER088C	COX9	P07255	59 aa		1.07	□□□□□ -2.24
DOT6	YER088C	SNF4	P12904	322 aa		1.07	□□□□□ -2.24
DOT6	YER088C	YBR285W	P38354	144 aa		1.07	□□□□□ -2.24
DOT6	YER088C	IRC22	P40006	225 aa		1.07	□□□□□ -2.24
DOT6	YER088C	GLE2	P40066	365 aa		1.07	□□□□□ -2.24
DOT6	YER088C	YGL204C	P53089	101 aa		1.07	□□□□□ -2.24
DOT6	YER088C	SAY1	P53324	424 aa		1.07	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms