RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W FCY22Q12119 530 aa3.11□□□□□ -1.91
SWI1YPL016W SKS1Q12505 502 aa3.11□□□□□ -1.91
SWI1YPL016W SFG1Q12507 346 aa3.11□□□□□ -1.91
SWI1YPL016W HYP2P23301 157 aaKnown RBP3.11□□□□□ -1.91
SWI1YPL016W SGE1P33335 543 aa3.11□□□□□ -1.91
SWI1YPL016W YKL070WP36087 169 aa3.11□□□□□ -1.91
SWI1YPL016W DAD2P36162 133 aa3.11□□□□□ -1.91
SWI1YPL016W CIS3P47001 227 aa3.11□□□□□ -1.91
SWI1YPL016W YGL034CP53186 121 aa3.11□□□□□ -1.91
SWI1YPL016W YDR042CQ03205 200 aa3.11□□□□□ -1.91
SWI1YPL016W YMR310CQ04867 317 aaPredicted RBP3.11□□□□□ -1.91
SWI1YPL016W FCF2Q12035 217 aaPredicted RBP3.11□□□□□ -1.91
SWI1YPL016W UBA3Q99344 299 aa3.11□□□□□ -1.91
SWI1YPL016W IES6P32617 166 aa3.1□□□□□ -1.91
SWI1YPL016W SFT2P38166 215 aa3.1□□□□□ -1.91
SWI1YPL016W YJL068CP40363 299 aa3.1□□□□□ -1.91
SWI1YPL016W HHT1P61830 136 aa3.1□□□□□ -1.91
SWI1YPL016W YMR320WQ04897 101 aa3.1□□□□□ -1.91
SWI1YPL016W YOR338WQ99326 363 aa3.1□□□□□ -1.91
SWI1YPL016W TKL2P33315 681 aa3.1□□□□□ -1.91
SWI1YPL016W GGC1P38988 300 aa3.1□□□□□ -1.91
SWI1YPL016W CWP2P43497 92 aa3.1□□□□□ -1.91
SWI1YPL016W VPS55P47111 140 aa3.1□□□□□ -1.91
SWI1YPL016W MPP6P53725 186 aaPredicted RBP3.1□□□□□ -1.91
SWI1YPL016W YCL021W-AQ96VH3 125 aa3.1□□□□□ -1.91
SWI1YPL016W ATG40Q99325 256 aa3.1□□□□□ -1.91
SWI1YPL016W COX13P32799 129 aa3.1□□□□□ -1.91
SWI1YPL016W GEX2P36173 615 aa3.1□□□□□ -1.91
SWI1YPL016W PAU4P53427 120 aa3.1□□□□□ -1.91
SWI1YPL016W YIL014C-AQ02598 104 aa3.1□□□□□ -1.91
SWI1YPL016W YPR071WQ12346 211 aa3.1□□□□□ -1.91
SWI1YPL016W BEM2P39960 2167 aaKnown RBP3.09□□□□□ -1.91
SWI1YPL016W FCY2P17064 533 aa3.09□□□□□ -1.91
SWI1YPL016W SPO13P23624 291 aa3.09□□□□□ -1.91
SWI1YPL016W TOM40P23644 387 aaKnown RBP3.09□□□□□ -1.91
SWI1YPL016W REC114P32841 428 aa3.09□□□□□ -1.91
SWI1YPL016W MIX23P38162 196 aa3.09□□□□□ -1.91
SWI1YPL016W BRR6P53062 197 aa3.09□□□□□ -1.91
SWI1YPL016W GEP3Q08622 556 aa3.09□□□□□ -1.91
SWI1YPL016W PRP46Q12417 451 aaPredicted RBP3.09□□□□□ -1.91
SWI1YPL016W YIL102C-AQ2V2P5 75 aa3.09□□□□□ -1.91
SWI1YPL016W DAL82P21705 255 aa3.09□□□□□ -1.91
SWI1YPL016W FMP46P36141 133 aaKnown RBP3.09□□□□□ -1.91
SWI1YPL016W PET8P38921 284 aa3.09□□□□□ -1.91
SWI1YPL016W YNR071CP53757 342 aa3.09□□□□□ -1.91
SWI1YPL016W TDA7P53882 636 aaPredicted RBP3.09□□□□□ -1.91
SWI1YPL016W YOL162WP0CF19 215 aa3.09□□□□□ -1.92
SWI1YPL016W YLR346CQ06139 101 aa3.09□□□□□ -1.92
SWI1YPL016W YOL118CQ08259 102 aa3.09□□□□□ -1.92
SWI1YPL016W YOR192C-CQ3E736 78 aa3.09□□□□□ -1.92
SWI1YPL016W YMR175W-AQ3E766 64 aa3.09□□□□□ -1.92
SWI1YPL016W BRR2P32639 2163 aaKnown RBP3.08□□□□□ -1.92
SWI1YPL016W ERG2P32352 222 aa3.08□□□□□ -1.92
SWI1YPL016W PRP18P33411 251 aaPredicted RBP3.08□□□□□ -1.92
SWI1YPL016W MID2P36027 376 aa3.08□□□□□ -1.92
SWI1YPL016W NRG2P38082 220 aa3.08□□□□□ -1.92
SWI1YPL016W YNL194CP40169 301 aa3.08□□□□□ -1.92
SWI1YPL016W PEX11Q12462 236 aa3.08□□□□□ -1.92
SWI1YPL016W YEA4P40004 342 aa3.08□□□□□ -1.92
SWI1YPL016W HMF1P40037 129 aaKnown RBP3.08□□□□□ -1.92
SWI1YPL016W YGR219WP53307 113 aa3.08□□□□□ -1.92
SWI1YPL016W HST4P53688 370 aa3.08□□□□□ -1.92
SWI1YPL016W MCH4Q08268 501 aa3.08□□□□□ -1.92
SWI1YPL016W ACC1Q00955 2233 aaKnown RBP3.08□□□□□ -1.92
SWI1YPL016W YHR139C-AO13536 103 aa3.08□□□□□ -1.92
SWI1YPL016W ECM34P38728 170 aa3.08□□□□□ -1.92
SWI1YPL016W BXI1P48558 297 aa3.08□□□□□ -1.92
SWI1YPL016W CAB4P53332 305 aa3.08□□□□□ -1.92
SWI1YPL016W ATG21Q02887 496 aa3.08□□□□□ -1.92
SWI1YPL016W SUT2Q12286 268 aa3.08□□□□□ -1.92
SWI1YPL016W POM34Q12445 299 aa3.08□□□□□ -1.92
SWI1YPL016W PAU1P0CE88 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU14P0CE89 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU6P0CE90 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU18P0CE91 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU8P0CE92 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU11P0CE93 120 aa3.07□□□□□ -1.92
SWI1YPL016W RPL1AP0CX43 217 aaKnown RBP3.07□□□□□ -1.92
SWI1YPL016W RPL1BP0CX44 217 aaKnown RBP3.07□□□□□ -1.92
SWI1YPL016W RPB7P34087 171 aa3.07□□□□□ -1.92
SWI1YPL016W PAU13P38725 120 aa3.07□□□□□ -1.92
SWI1YPL016W YGR269WP40326 108 aa3.07□□□□□ -1.92
SWI1YPL016W PAU10Q03050 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU20Q08322 120 aa3.07□□□□□ -1.92
SWI1YPL016W PAU9Q3E770 120 aa3.07□□□□□ -1.92
SWI1YPL016W VPS63O13549 108 aa3.07□□□□□ -1.92
SWI1YPL016W SOD1P00445 154 aaKnown RBP3.07□□□□□ -1.92
SWI1YPL016W VTC1P40046 129 aaRIP-Chip data3.07□□□□□ -1.92not detected
SWI1YPL016W COX15P40086 486 aa3.07□□□□□ -1.92
SWI1YPL016W KNH1P50112 268 aa3.07□□□□□ -1.92
SWI1YPL016W YNR077CP53758 84 aa3.07□□□□□ -1.92
SWI1YPL016W VPS71Q03433 280 aa3.07□□□□□ -1.92
SWI1YPL016W AIM34Q03673 198 aa3.07□□□□□ -1.92
SWI1YPL016W MRP49P32388 137 aa3.07□□□□□ -1.92
SWI1YPL016W TIR2P33890 251 aa3.07□□□□□ -1.92
SWI1YPL016W ROT1Q03691 256 aa3.07□□□□□ -1.92
SWI1YPL016W HNT1Q04344 158 aaKnown RBP3.07□□□□□ -1.92
SWI1YPL016W YOR376WQ08900 122 aa3.07□□□□□ -1.92
SWI1YPL016W SWT1Q12104 458 aa3.07□□□□□ -1.92
SWI1YPL016W HVG1P0CE11 249 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms