RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W DGK1Q12382 290 aa1.52□□□□□ -2.17
HER1YOR227W DFM1Q12743 341 aaKnown RBP1.52□□□□□ -2.17
HER1YOR227W CDC8P00572 216 aa1.52□□□□□ -2.17
HER1YOR227W RPL25P04456 142 aaKnown RBP1.52□□□□□ -2.17
HER1YOR227W RPB3P16370 318 aaKnown RBP1.52□□□□□ -2.17
HER1YOR227W CDC43P18898 376 aa1.52□□□□□ -2.17
HER1YOR227W ATG22P25568 528 aa1.52□□□□□ -2.17
HER1YOR227W YBL010CP32788 280 aa1.52□□□□□ -2.17
HER1YOR227W YJL218WP40892 196 aaKnown RBP1.52□□□□□ -2.17
HER1YOR227W YFL019CP43576 117 aa1.52□□□□□ -2.17
HER1YOR227W TDA4P47153 279 aa1.52□□□□□ -2.17
HER1YOR227W CLD1P53264 445 aa1.52□□□□□ -2.17
HER1YOR227W COF1Q03048 143 aaKnown RBP1.52□□□□□ -2.17
HER1YOR227W DIG2Q03373 323 aaKnown RBP1.52□□□□□ -2.17
HER1YOR227W GOT1Q03554 138 aa1.52□□□□□ -2.17
HER1YOR227W YPL162CQ12042 273 aa1.52□□□□□ -2.17
HER1YOR227W PRY2P36110 329 aa1.52□□□□□ -2.17
HER1YOR227W YPL073CP40323 161 aa1.52□□□□□ -2.17
HER1YOR227W STB1P42845 420 aa1.52□□□□□ -2.17
HER1YOR227W ERJ5P43613 295 aaPredicted RBP1.52□□□□□ -2.17
HER1YOR227W YFR054CP43622 192 aa1.52□□□□□ -2.17
HER1YOR227W MNN5P46982 586 aa1.52□□□□□ -2.17
HER1YOR227W AKR2Q12013 749 aa1.52□□□□□ -2.17
HER1YOR227W PSF1Q12488 208 aa1.52□□□□□ -2.17
HER1YOR227W YOR032W-AQ8TGS1 66 aa1.52□□□□□ -2.17
HER1YOR227W PRE7P23724 241 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W ERG2P32352 222 aa1.51□□□□□ -2.17
HER1YOR227W PTC1P35182 281 aa1.51□□□□□ -2.17
HER1YOR227W ETR1P38071 380 aa1.51□□□□□ -2.17
HER1YOR227W VTC1P40046 129 aaRIP-Chip data1.51□□□□□ -2.17not detected
HER1YOR227W VPS71Q03433 280 aa1.51□□□□□ -2.17
HER1YOR227W YPL225WQ08971 146 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W SMT3Q12306 101 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W COX10P21592 462 aa1.51□□□□□ -2.17
HER1YOR227W SEC14P24280 304 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W RPL14AP36105 138 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W RPL14BP38754 138 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W AVT6P40074 448 aa1.51□□□□□ -2.17
HER1YOR227W DLS1P40366 167 aa1.51□□□□□ -2.17
HER1YOR227W GLR1P41921 483 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W RPE1P46969 238 aa1.51□□□□□ -2.17
HER1YOR227W YDR415CQ04033 374 aaPredicted RBP1.51□□□□□ -2.17
HER1YOR227W KRE9P39005 276 aa1.51□□□□□ -2.17
HER1YOR227W YER181CP40097 107 aa1.51□□□□□ -2.17
HER1YOR227W SWT21P53873 357 aaPredicted RBP1.51□□□□□ -2.17
HER1YOR227W RPL21BQ12672 160 aaKnown RBP1.51□□□□□ -2.17
HER1YOR227W TSC3Q3E790 80 aa1.51□□□□□ -2.17
HER1YOR227W GSP1P32835 219 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W GSP2P32836 220 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W POP4P38336 279 aa1.5□□□□□ -2.17
HER1YOR227W RPS20P38701 121 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W MEP2P41948 499 aa1.5□□□□□ -2.17
HER1YOR227W YGL262WP53054 175 aa1.5□□□□□ -2.17
HER1YOR227W MAK3Q03503 176 aa1.5□□□□□ -2.17
HER1YOR227W YDR391CQ04170 232 aa1.5□□□□□ -2.17
HER1YOR227W FCF1Q05498 189 aaPredicted RBP1.5□□□□□ -2.17
HER1YOR227W FYV12Q08559 129 aa1.5□□□□□ -2.17
HER1YOR227W JID1Q12350 301 aa1.5□□□□□ -2.17
HER1YOR227W FAS1P07149 2051 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W YLR156WP0CE96 114 aa1.5□□□□□ -2.17
HER1YOR227W YLR159WP0CE97 114 aa1.5□□□□□ -2.17
HER1YOR227W YLR161WP0CE98 114 aa1.5□□□□□ -2.17
HER1YOR227W RPS27AP35997 82 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W RPS27BP38711 82 aa1.5□□□□□ -2.17
HER1YOR227W YNR062CP53748 327 aa1.5□□□□□ -2.17
HER1YOR227W RAV2Q03956 351 aa1.5□□□□□ -2.17
HER1YOR227W PRP11Q07350 266 aaPredicted RBP1.5□□□□□ -2.17
HER1YOR227W MCH1Q07376 486 aa1.5□□□□□ -2.17
HER1YOR227W POL2P21951 2222 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W YCR099CP25657 155 aa1.5□□□□□ -2.17
HER1YOR227W PAN3P36102 679 aaPredicted RBP1.5□□□□□ -2.17
HER1YOR227W MIG3P39943 394 aa1.5□□□□□ -2.17
HER1YOR227W YNL208WP40159 199 aaKnown RBP1.5□□□□□ -2.17
HER1YOR227W BOL2P53082 120 aa1.5□□□□□ -2.17
HER1YOR227W DAD3P69850 94 aa1.5□□□□□ -2.17
HER1YOR227W PLP1Q04004 230 aa1.5□□□□□ -2.17
HER1YOR227W SRL1Q08673 210 aa1.5□□□□□ -2.17
HER1YOR227W GEP5Q12393 293 aa1.5□□□□□ -2.17
HER1YOR227W YAL067W-AQ8TGK6 75 aa1.5□□□□□ -2.17
HER1YOR227W SHE2P36068 246 aaKnown RBP RIP-Chip data1.49□□□□□ -2.17not detected
HER1YOR227W SHB17P36136 271 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W SCO2P38072 301 aa1.49□□□□□ -2.17
HER1YOR227W YBR220CP38318 560 aa1.49□□□□□ -2.17
HER1YOR227W PHO89P38361 574 aa1.49□□□□□ -2.17
HER1YOR227W YHR140WP38842 239 aa1.49□□□□□ -2.17
HER1YOR227W RGI1P40043 161 aaPredicted RBP1.49□□□□□ -2.17
HER1YOR227W SER2P42941 309 aa1.49□□□□□ -2.17
HER1YOR227W SFT1P43682 97 aa1.49□□□□□ -2.17
HER1YOR227W RPL21AQ02753 160 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W CGI121Q03705 181 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W TVP15Q03860 143 aa1.49□□□□□ -2.17
HER1YOR227W YDR102CQ03864 110 aa1.49□□□□□ -2.17
HER1YOR227W TVP18Q04767 167 aa1.49□□□□□ -2.17
HER1YOR227W FYV7Q12247 151 aa1.49□□□□□ -2.17
HER1YOR227W HTZ1Q12692 134 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W HTL1Q9URQ5 78 aa1.49□□□□□ -2.17
HER1YOR227W CDC39P25655 2108 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W SEC16P48415 2195 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W GPA2P10823 449 aa1.49□□□□□ -2.17
HER1YOR227W BUD23P25627 275 aaPredicted RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms