RNA–Protein interactions for RNA: YML116W

ATR1, Transcript of Multidrug efflux pump of the major facilitator superfamily, yeastyeast

Gene ATR1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATR1YML116W RPS27AP35997 82 aaKnown RBP4.06□□□□□ -1.76
ATR1YML116W RPS27BP38711 82 aa4.06□□□□□ -1.76
ATR1YML116W PGU1P47180 361 aa4.06□□□□□ -1.76
ATR1YML116W NUP49Q02199 472 aa4.06□□□□□ -1.76
ATR1YML116W YMR253CQ04835 414 aa4.06□□□□□ -1.76
ATR1YML116W ATG5Q12380 294 aa4.06□□□□□ -1.76
ATR1YML116W RPS28BP0C0X0 67 aaKnown RBP4.06□□□□□ -1.76
ATR1YML116W UPS2P35200 230 aa4.06□□□□□ -1.76
ATR1YML116W ERV15P38312 142 aa4.06□□□□□ -1.76
ATR1YML116W BDH1P39714 382 aa4.06□□□□□ -1.76
ATR1YML116W MPM1P40364 252 aa4.06□□□□□ -1.76
ATR1YML116W GNA1P43577 159 aaPredicted RBP4.06□□□□□ -1.76
ATR1YML116W YJL028WP47062 111 aa4.06□□□□□ -1.76
ATR1YML116W RPS12P48589 143 aaKnown RBP4.06□□□□□ -1.76
ATR1YML116W UBC12P52491 188 aa4.06□□□□□ -1.76
ATR1YML116W YGL262WP53054 175 aa4.06□□□□□ -1.76
ATR1YML116W YNL184CP53876 108 aa4.06□□□□□ -1.76
ATR1YML116W LSM7P53905 115 aaKnown RBP4.06□□□□□ -1.76
ATR1YML116W COG5P53951 403 aa4.06□□□□□ -1.76
ATR1YML116W ABF2Q02486 183 aa4.06□□□□□ -1.76
ATR1YML116W ECM19Q06011 112 aa4.06□□□□□ -1.76
ATR1YML116W YPL257WQ08974 193 aa4.06□□□□□ -1.76
ATR1YML116W YLR050CQ12155 161 aaKnown RBP4.06□□□□□ -1.76
ATR1YML116W YPS3Q12303 508 aa4.06□□□□□ -1.76
ATR1YML116W DFM1Q12743 341 aaKnown RBP4.06□□□□□ -1.76
ATR1YML116W YMR230W-AQ3E7B5 62 aa4.06□□□□□ -1.76
ATR1YML116W RPS28AQ3E7X9 67 aaPredicted RBP4.06□□□□□ -1.76
ATR1YML116W CDC7P06243 507 aa4.05□□□□□ -1.76
ATR1YML116W AHC2P25649 128 aa4.05□□□□□ -1.76
ATR1YML116W RPB9P27999 122 aa4.05□□□□□ -1.76
ATR1YML116W ARO7P32178 256 aa4.05□□□□□ -1.76
ATR1YML116W SWD3P38123 315 aa4.05□□□□□ -1.76
ATR1YML116W YGL118CP53132 145 aa4.05□□□□□ -1.76
ATR1YML116W YGR026WP53217 278 aa4.05□□□□□ -1.76
ATR1YML116W HHO1P53551 258 aa4.05□□□□□ -1.76
ATR1YML116W MDM32Q12171 622 aa4.05□□□□□ -1.76
ATR1YML116W YBR220CP38318 560 aa4.04□□□□□ -1.76
ATR1YML116W YPT31P38555 223 aaKnown RBP4.04□□□□□ -1.76
ATR1YML116W DOG1P38774 246 aa4.04□□□□□ -1.76
ATR1YML116W TRR2P38816 342 aa4.04□□□□□ -1.76
ATR1YML116W DIE2P50076 525 aa4.04□□□□□ -1.76
ATR1YML116W IGO1P53897 168 aa4.04□□□□□ -1.76
ATR1YML116W YPR174CQ06616 221 aaPredicted RBP4.04□□□□□ -1.76
ATR1YML116W YBL112CQ3E7Y4 105 aa4.04□□□□□ -1.76
ATR1YML116W YAL067W-AQ8TGK6 75 aa4.04□□□□□ -1.76
ATR1YML116W HYM1P32464 399 aa4.03□□□□□ -1.76
ATR1YML116W ECM34P38728 170 aa4.03□□□□□ -1.76
ATR1YML116W RRT13P40042 185 aa4.03□□□□□ -1.76
ATR1YML116W YIR035CP40579 254 aa4.03□□□□□ -1.76
ATR1YML116W SYS1P41544 203 aa4.03□□□□□ -1.76
ATR1YML116W ARO8P53090 500 aaKnown RBP4.03□□□□□ -1.76
ATR1YML116W PRM8P53174 237 aa4.03□□□□□ -1.76
ATR1YML116W YMR099CQ03161 297 aaKnown RBP4.03□□□□□ -1.76
ATR1YML116W DIG2Q03373 323 aaKnown RBP4.03□□□□□ -1.76
ATR1YML116W YIR021W-AQ3E739 70 aa4.03□□□□□ -1.76
ATR1YML116W YLR361C-AQ3E795 98 aa4.03□□□□□ -1.76
ATR1YML116W SPS2P08459 502 aa4.03□□□□□ -1.77
ATR1YML116W GPI14P47088 403 aaKnown RBP4.03□□□□□ -1.77
ATR1YML116W MOG1P47123 218 aa4.03□□□□□ -1.77
ATR1YML116W SDH7Q04401 133 aa4.03□□□□□ -1.77
ATR1YML116W TVP18Q04767 167 aa4.03□□□□□ -1.77
ATR1YML116W SLO1Q3E784 85 aa4.03□□□□□ -1.77
ATR1YML116W YSF3P0C074 85 aaPredicted RBP4.02□□□□□ -1.77
ATR1YML116W MSA2P36157 363 aa4.02□□□□□ -1.77
ATR1YML116W HST4P53688 370 aa4.02□□□□□ -1.77
ATR1YML116W SEC22P22214 214 aa4.01□□□□□ -1.77
ATR1YML116W PEX4P29340 183 aa4.01□□□□□ -1.77
ATR1YML116W MDH3P32419 343 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
ATR1YML116W YHL044WP38727 235 aa4.01□□□□□ -1.77
ATR1YML116W RPF1P38805 295 aaKnown RBP4.01□□□□□ -1.77
ATR1YML116W SPO73P40031 143 aa4.01□□□□□ -1.77
ATR1YML116W NSE4P43124 402 aa4.01□□□□□ -1.77
ATR1YML116W BOR1P53838 576 aa4.01□□□□□ -1.77
ATR1YML116W PKR1Q03880 122 aaKnown RBP4.01□□□□□ -1.77
ATR1YML116W RNH202Q05635 350 aa4.01□□□□□ -1.77
ATR1YML116W PRP11Q07350 266 aaPredicted RBP4.01□□□□□ -1.77
ATR1YML116W RDI1Q12434 202 aa4.01□□□□□ -1.77
ATR1YML116W MHF1Q3E835 90 aa4.01□□□□□ -1.77
ATR1YML116W DDI2P0CH63 225 aa4□□□□□ -1.77
ATR1YML116W DDI3P0CH64 225 aa4□□□□□ -1.77
ATR1YML116W YCR023CP25351 611 aa4□□□□□ -1.77
ATR1YML116W YOR062CP36025 268 aa4□□□□□ -1.77
ATR1YML116W YBR285WP38354 144 aa4□□□□□ -1.77
ATR1YML116W ASP1P38986 381 aaPredicted RBP4□□□□□ -1.77
ATR1YML116W MPC1P53157 130 aaKnown RBP4□□□□□ -1.77
ATR1YML116W YGR050CP53231 118 aa4□□□□□ -1.77
ATR1YML116W AIM36Q03798 255 aa4□□□□□ -1.77
ATR1YML116W YDR391CQ04170 232 aa4□□□□□ -1.77
ATR1YML116W GAL83Q04739 417 aa4□□□□□ -1.77
ATR1YML116W SPC3Q12133 184 aa4□□□□□ -1.77
ATR1YML116W ATP14Q12349 124 aa4□□□□□ -1.77
ATR1YML116W RIB3Q99258 208 aa4□□□□□ -1.77
ATR1YML116W SIR2P06700 562 aa3.99□□□□□ -1.77
ATR1YML116W YFR010W-AP0C5N0 62 aa3.99□□□□□ -1.77
ATR1YML116W STP22P25604 385 aa3.99□□□□□ -1.77
ATR1YML116W MRPL27P36526 146 aaPredicted RBP3.99□□□□□ -1.77
ATR1YML116W RFC2P40348 353 aa3.99□□□□□ -1.77
ATR1YML116W PGD1P40356 397 aa3.99□□□□□ -1.77
ATR1YML116W GLC8P41818 229 aa3.99□□□□□ -1.77
ATR1YML116W MPA43P53583 542 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms