RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	NCA3	P46955	337 aa		3.2	□□□□□ -1.9
SPI1	YER150W	ERV14	P53173	138 aa		3.2	□□□□□ -1.9
SPI1	YER150W	YDR415C	Q04033	374 aa	Predicted RBP	3.2	□□□□□ -1.9
SPI1	YER150W	FIT1	Q04433	528 aa		3.2	□□□□□ -1.9
SPI1	YER150W	YMR252C	Q04814	134 aa		3.2	□□□□□ -1.9
SPI1	YER150W	SML1	Q04964	104 aa		3.2	□□□□□ -1.9
SPI1	YER150W	RPL13A	Q12690	199 aa	Predicted RBP	3.2	□□□□□ -1.9
SPI1	YER150W	LYS2	P07702	1392 aa		3.2	□□□□□ -1.9
SPI1	YER150W	YRF1-3	P0CX14	1859 aa		3.2	□□□□□ -1.9
SPI1	YER150W	YRF1-7	P0CX15	1859 aa		3.2	□□□□□ -1.9
SPI1	YER150W	YRF1-6	P53819	1859 aa		3.2	□□□□□ -1.9
SPI1	YER150W	RAS2	P01120	322 aa	Known RBP	3.19	□□□□□ -1.9
SPI1	YER150W	ATP15	P21306	62 aa		3.19	□□□□□ -1.9
SPI1	YER150W	CLB6	P32943	380 aa		3.19	□□□□□ -1.9
SPI1	YER150W	TIR3	P40552	269 aa		3.19	□□□□□ -1.9
SPI1	YER150W	YJR085C	P47131	105 aa	Known RBP	3.19	□□□□□ -1.9
SPI1	YER150W	SMD1	Q02260	146 aa	Predicted RBP	3.19	□□□□□ -1.9
SPI1	YER150W	ANT1	Q06497	328 aa		3.19	□□□□□ -1.9
SPI1	YER150W	SMT3	Q12306	101 aa	Known RBP	3.19	□□□□□ -1.9
SPI1	YER150W	PST1	Q12355	444 aa		3.19	□□□□□ -1.9
SPI1	YER150W	NAG1	Q8TGN9	163 aa		3.19	□□□□□ -1.9
SPI1	YER150W	MED11	Q99278	115 aa		3.19	□□□□□ -1.9
SPI1	YER150W	ADE6	P38972	1358 aa	Known RBP	3.19	□□□□□ -1.9
SPI1	YER150W	MSW1	P04803	379 aa		3.18	□□□□□ -1.9
SPI1	YER150W	NOP1	P15646	327 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	DDR48	P18899	430 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	YCR099C	P25657	155 aa		3.18	□□□□□ -1.9
SPI1	YER150W	TOD6	P34219	525 aa		3.18	□□□□□ -1.9
SPI1	YER150W	VTC1	P40046	129 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
SPI1	YER150W	CCS1	P40202	249 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	DIM1	P41819	318 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	MPC1	P53157	130 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	YPL039W	Q03080	316 aa		3.18	□□□□□ -1.9
SPI1	YER150W	YDR102C	Q03864	110 aa		3.18	□□□□□ -1.9
SPI1	YER150W	YMR090W	Q04304	227 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	YMR254C	Q04838	102 aa		3.18	□□□□□ -1.9
SPI1	YER150W	RRT7	Q07829	113 aa		3.18	□□□□□ -1.9
SPI1	YER150W	ATG5	Q12380	294 aa		3.18	□□□□□ -1.9
SPI1	YER150W	RPL21B	Q12672	160 aa	Known RBP	3.18	□□□□□ -1.9
SPI1	YER150W	GEA1	P47102	1408 aa	Predicted RBP	3.18	□□□□□ -1.9
SPI1	YER150W	YAR023C	D6VPM8	179 aa		3.17	□□□□□ -1.9
SPI1	YER150W	CPA1	P07258	411 aa	Known RBP	3.17	□□□□□ -1.9
SPI1	YER150W	YCR050C	P25630	102 aa		3.17	□□□□□ -1.9
SPI1	YER150W	TMA19	P35691	167 aa	Known RBP	3.17	□□□□□ -1.9
SPI1	YER150W	YER135C	P40082	130 aa		3.17	□□□□□ -1.9
SPI1	YER150W	YIR035C	P40579	254 aa		3.17	□□□□□ -1.9
SPI1	YER150W	CRH1	P53301	507 aa		3.17	□□□□□ -1.9
SPI1	YER150W	GAL83	Q04739	417 aa		3.17	□□□□□ -1.9
SPI1	YER150W	SYM1	Q06563	197 aa		3.17	□□□□□ -1.9
SPI1	YER150W	YPR174C	Q06616	221 aa	Predicted RBP	3.17	□□□□□ -1.9
SPI1	YER150W	JID1	Q12350	301 aa		3.17	□□□□□ -1.9
SPI1	YER150W	ATO3	Q12359	275 aa		3.17	□□□□□ -1.9
SPI1	YER150W	YGL010W	P25338	174 aa		3.16	□□□□□ -1.9
SPI1	YER150W	FMT1	P32785	401 aa		3.16	□□□□□ -1.9
SPI1	YER150W	EMP24	P32803	203 aa	Known RBP	3.16	□□□□□ -1.9
SPI1	YER150W	HOT13	P36078	116 aa		3.16	□□□□□ -1.9
SPI1	YER150W	PAM17	P36147	197 aa		3.16	□□□□□ -1.9
SPI1	YER150W	YEL028W	P39989	153 aa		3.16	□□□□□ -1.9
SPI1	YER150W	YND1	P40009	630 aa		3.16	□□□□□ -1.9
SPI1	YER150W	NSA2	P40078	261 aa	Known RBP	3.16	□□□□□ -1.9
SPI1	YER150W	YFL067W	P43537	175 aa		3.16	□□□□□ -1.9
SPI1	YER150W	ATG18	P43601	500 aa		3.16	□□□□□ -1.9
SPI1	YER150W	BNS1	P50084	137 aa		3.16	□□□□□ -1.9
SPI1	YER150W	YPL067C	Q02754	198 aa		3.16	□□□□□ -1.9
SPI1	YER150W	FIT3	Q08907	204 aa		3.16	□□□□□ -1.9
SPI1	YER150W	AYT1	Q12226	474 aa		3.16	□□□□□ -1.9
SPI1	YER150W	COX5B	P00425	151 aa		3.15	□□□□□ -1.91
SPI1	YER150W	RPL42A	P0CX27	106 aa	Known RBP	3.15	□□□□□ -1.91
SPI1	YER150W	RPL42B	P0CX28	106 aa	Known RBP	3.15	□□□□□ -1.91
SPI1	YER150W	RPL21A	Q02753	160 aa	Known RBP	3.15	□□□□□ -1.91
SPI1	YER150W	MRPS8	Q03799	155 aa		3.15	□□□□□ -1.91
SPI1	YER150W	TVP15	Q03860	143 aa		3.15	□□□□□ -1.91
SPI1	YER150W	SHH3	Q04487	196 aa		3.15	□□□□□ -1.91
SPI1	YER150W	FYV12	Q08559	129 aa		3.15	□□□□□ -1.91
SPI1	YER150W	ODC2	Q99297	307 aa		3.15	□□□□□ -1.91
SPI1	YER150W	YSP2	Q06681	1438 aa		3.14	□□□□□ -1.91
SPI1	YER150W	TIM9	O74700	87 aa		3.14	□□□□□ -1.91
SPI1	YER150W	HMRA1	P0CY11	126 aa		3.14	□□□□□ -1.91
SPI1	YER150W	MDH2	P22133	377 aa		3.14	□□□□□ -1.91
SPI1	YER150W	UMP1	P38293	148 aa		3.14	□□□□□ -1.91
SPI1	YER150W	HPA3	P39979	161 aa		3.14	□□□□□ -1.91
SPI1	YER150W	ARC15	P40518	154 aa	RIP-Chip data	3.14	□□□□□ -1.91	not detected
SPI1	YER150W	YNR064C	P53750	290 aa		3.14	□□□□□ -1.91
SPI1	YER150W	YMR244W	Q04018	355 aa		3.14	□□□□□ -1.91
SPI1	YER150W	GPI11	Q06636	219 aa		3.14	□□□□□ -1.91
SPI1	YER150W	YDR029W	Q12111	104 aa		3.14	□□□□□ -1.91
SPI1	YER150W	YPL247C	Q12523	523 aa		3.14	□□□□□ -1.91
SPI1	YER150W	TY1B-DR1	Q03855	1755 aa		3.14	□□□□□ -1.91
SPI1	YER150W	TY1B-BR	Q12193	1756 aa		3.14	□□□□□ -1.91
SPI1	YER150W	TY1B-DR3	Q99231	1755 aa		3.14	□□□□□ -1.91
SPI1	YER150W	BNI1	P41832	1953 aa		3.13	□□□□□ -1.91
SPI1	YER150W	RPL9A	P05738	191 aa	Known RBP	3.13	□□□□□ -1.91
SPI1	YER150W	FLO5	P38894	1075 aa		3.13	□□□□□ -1.91
SPI1	YER150W	ASP1	P38986	381 aa	Predicted RBP	3.13	□□□□□ -1.91
SPI1	YER150W	RPR2	P40571	144 aa		3.13	□□□□□ -1.91
SPI1	YER150W	DSK2	P48510	373 aa		3.13	□□□□□ -1.91
SPI1	YER150W	RPL9B	P51401	191 aa	Known RBP	3.13	□□□□□ -1.91
SPI1	YER150W	YGL118C	P53132	145 aa		3.13	□□□□□ -1.91
SPI1	YER150W	HAL1	Q01766	294 aa		3.13	□□□□□ -1.91
SPI1	YER150W	RSM10	Q03201	203 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms