RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W SEC16P48415 2195 aaKnown RBP3.49□□□□□ -1.85
HSP42YDR171W BEM2P39960 2167 aaKnown RBP3.48□□□□□ -1.85
HSP42YDR171W MBF1O14467 151 aaKnown RBP3.48□□□□□ -1.85
HSP42YDR171W PAI3P01094 68 aa3.48□□□□□ -1.85
HSP42YDR171W MIG1P27705 504 aa3.48□□□□□ -1.85
HSP42YDR171W MNS1P32906 549 aa3.48□□□□□ -1.85
HSP42YDR171W PRE5P40302 234 aaKnown RBP3.48□□□□□ -1.85
HSP42YDR171W NAS2P40555 220 aa3.48□□□□□ -1.85
HSP42YDR171W SAS2P40963 338 aa3.48□□□□□ -1.85
HSP42YDR171W YFL067WP43537 175 aa3.48□□□□□ -1.85
HSP42YDR171W LOC1P43586 204 aaPredicted RBP3.48□□□□□ -1.85
HSP42YDR171W COQ5P49017 307 aa3.48□□□□□ -1.85
HSP42YDR171W VEL1P53058 206 aa3.48□□□□□ -1.85
HSP42YDR171W TPC1P53257 314 aa3.48□□□□□ -1.85
HSP42YDR171W YNR064CP53750 290 aa3.48□□□□□ -1.85
HSP42YDR171W PDR17P53844 350 aa3.48□□□□□ -1.85
HSP42YDR171W GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
HSP42YDR171W ATG39Q06159 398 aa3.48□□□□□ -1.85
HSP42YDR171W YOR105WQ08504 108 aa3.48□□□□□ -1.85
HSP42YDR171W YER078W-AQ3E7A2 54 aa3.48□□□□□ -1.85
HSP42YDR171W ACC1Q00955 2233 aaKnown RBP3.47□□□□□ -1.85
HSP42YDR171W RPL1AP0CX43 217 aaKnown RBP3.47□□□□□ -1.85
HSP42YDR171W RPL1BP0CX44 217 aaKnown RBP3.47□□□□□ -1.85
HSP42YDR171W PPA2P28239 310 aa3.47□□□□□ -1.85
HSP42YDR171W OCH1P31755 480 aa3.47□□□□□ -1.85
HSP42YDR171W SWD2P36104 329 aaPredicted RBP3.47□□□□□ -1.85
HSP42YDR171W NTC20P38302 140 aaPredicted RBP3.47□□□□□ -1.85
HSP42YDR171W YHL044WP38727 235 aa3.47□□□□□ -1.85
HSP42YDR171W PFS1P38872 237 aa3.47□□□□□ -1.85
HSP42YDR171W BAT1P38891 393 aaKnown RBP3.47□□□□□ -1.85
HSP42YDR171W BDH1P39714 382 aa3.47□□□□□ -1.85
HSP42YDR171W YER134CP40081 178 aa3.47□□□□□ -1.85
HSP42YDR171W CYB5P40312 120 aa3.47□□□□□ -1.85
HSP42YDR171W HAC1P41546 238 aa3.47□□□□□ -1.85
HSP42YDR171W HIT1P46973 164 aa3.47□□□□□ -1.85
HSP42YDR171W YGL230CP53074 147 aa3.47□□□□□ -1.85
HSP42YDR171W NCE101Q02820 53 aa3.47□□□□□ -1.85
HSP42YDR171W CGI121Q03705 181 aaKnown RBP3.47□□□□□ -1.85
HSP42YDR171W YML096WQ04489 525 aa3.47□□□□□ -1.85
HSP42YDR171W NAT3Q06504 195 aa3.47□□□□□ -1.85
HSP42YDR171W PAM18Q07914 168 aa3.47□□□□□ -1.85
HSP42YDR171W SMT3Q12306 101 aaKnown RBP3.47□□□□□ -1.85
HSP42YDR171W ISA2Q12425 185 aa3.47□□□□□ -1.85
HSP42YDR171W YDR524C-BQ3E6R4 66 aa3.47□□□□□ -1.85
HSP42YDR171W SLO1Q3E784 85 aa3.47□□□□□ -1.85
HSP42YDR171W SRP21P32342 167 aa3.46□□□□□ -1.86
HSP42YDR171W OM14P38325 134 aa3.46□□□□□ -1.86
HSP42YDR171W TAE1P38340 232 aa3.46□□□□□ -1.86
HSP42YDR171W YHR180WP38868 163 aa3.46□□□□□ -1.86
HSP42YDR171W COX15P40086 486 aa3.46□□□□□ -1.86
HSP42YDR171W YIL012WP40551 113 aa3.46□□□□□ -1.86
HSP42YDR171W MSL1P40567 111 aaPredicted RBP3.46□□□□□ -1.86
HSP42YDR171W OST1P41543 476 aaKnown RBP3.46□□□□□ -1.86
HSP42YDR171W YJL028WP47062 111 aa3.46□□□□□ -1.86
HSP42YDR171W BRR6P53062 197 aa3.46□□□□□ -1.86
HSP42YDR171W RPL21AQ02753 160 aaKnown RBP3.46□□□□□ -1.86
HSP42YDR171W YPL039WQ03080 316 aa3.46□□□□□ -1.86
HSP42YDR171W YML079WQ03629 201 aa3.46□□□□□ -1.86
HSP42YDR171W ADH6Q04894 360 aaKnown RBP3.46□□□□□ -1.86
HSP42YDR171W PRP11Q07350 266 aaPredicted RBP3.46□□□□□ -1.86
HSP42YDR171W MIM1Q08176 113 aa3.46□□□□□ -1.86
HSP42YDR171W YOR343CQ12484 108 aa3.46□□□□□ -1.86
HSP42YDR171W RPL21BQ12672 160 aaKnown RBP3.46□□□□□ -1.86
HSP42YDR171W YLR363W-AQ3E747 85 aa3.46□□□□□ -1.86
HSP42YDR171W YPR108W-AQ3E7B3 70 aa3.46□□□□□ -1.86
HSP42YDR171W Q0144Q9ZZW2 109 aa3.46□□□□□ -1.86
HSP42YDR171W GAL7P08431 366 aa3.45□□□□□ -1.86
HSP42YDR171W SEC11P15367 167 aa3.45□□□□□ -1.86
HSP42YDR171W FIG1P38224 298 aa3.45□□□□□ -1.86
HSP42YDR171W QDR3P38227 689 aa3.45□□□□□ -1.86
HSP42YDR171W WSC4P38739 605 aa3.45□□□□□ -1.86
HSP42YDR171W TEM1P38987 245 aa3.45□□□□□ -1.86
HSP42YDR171W YGR269WP40326 108 aa3.45□□□□□ -1.86
HSP42YDR171W PRM5P40476 318 aa3.45□□□□□ -1.86
HSP42YDR171W MIC27P50945 234 aa3.45□□□□□ -1.86
HSP42YDR171W YGL118CP53132 145 aa3.45□□□□□ -1.86
HSP42YDR171W CRH1P53301 507 aa3.45□□□□□ -1.86
HSP42YDR171W YPR098CQ06089 161 aa3.45□□□□□ -1.86
HSP42YDR171W IRC19Q07843 230 aa3.45□□□□□ -1.86
HSP42YDR171W FSF1Q12029 327 aaKnown RBP3.45□□□□□ -1.86
HSP42YDR171W SOD1P00445 154 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W CDC36P06100 191 aaPredicted RBP3.44□□□□□ -1.86
HSP42YDR171W SEC4P07560 215 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W YLL053CP0CD98 152 aa3.44□□□□□ -1.86
HSP42YDR171W HMRA1P0CY11 126 aa3.44□□□□□ -1.86
HSP42YDR171W TIR1P10863 254 aa3.44□□□□□ -1.86
HSP42YDR171W CWP1P28319 239 aa3.44□□□□□ -1.86
HSP42YDR171W HMX1P32339 317 aa3.44□□□□□ -1.86
HSP42YDR171W RAD23P32628 398 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W RPB7P34087 171 aa3.44□□□□□ -1.86
HSP42YDR171W YBL059WP34224 193 aa3.44□□□□□ -1.86
HSP42YDR171W YUH1P35127 236 aa3.44□□□□□ -1.86
HSP42YDR171W SOR1P35497 357 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W LSM2P38203 95 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W YBR220CP38318 560 aa3.44□□□□□ -1.86
HSP42YDR171W MST28P39552 234 aa3.44□□□□□ -1.86
HSP42YDR171W GEP7P53171 287 aa3.44□□□□□ -1.86
HSP42YDR171W RHO5P53879 331 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W GRH1Q04410 372 aaKnown RBP3.44□□□□□ -1.86
HSP42YDR171W RIM9Q04734 239 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 87.3 ms