RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCS60	YBR222C	UBP8	P50102	471 aa		4.98	□□□□□ -1.61
PCS60	YBR222C	NMA2	P53204	395 aa		4.98	□□□□□ -1.61
PCS60	YBR222C	LSM7	P53905	115 aa	Known RBP	4.98	□□□□□ -1.61
PCS60	YBR222C	BUD25	P85052	153 aa		4.98	□□□□□ -1.61
PCS60	YBR222C	SPR6	Q01684	191 aa		4.98	□□□□□ -1.61
PCS60	YBR222C	MRPS16	Q02608	121 aa		4.98	□□□□□ -1.61
PCS60	YBR222C	MPD1	Q12404	318 aa	Known RBP	4.98	□□□□□ -1.61
PCS60	YBR222C	YBR063C	P38083	404 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	CSH1	P38287	376 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	CUP9	P41817	306 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	YMR090W	Q04304	227 aa	Known RBP	4.97	□□□□□ -1.61
PCS60	YBR222C	HRT1	Q08273	121 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	CDC5	P32562	705 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	NNK1	P36003	928 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	VMA21	P41806	77 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	FIP1	P45976	327 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	YPS5	P53057	165 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	YOL160W	Q08321	113 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	TSC3	Q3E790	80 aa		4.97	□□□□□ -1.61
PCS60	YBR222C	CDC43	P18898	376 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	MRP21	P38175	177 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	CWP2	P43497	92 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	SWS2	P53937	143 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	SPG4	Q04438	115 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	ARR3	Q06598	404 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	YPR174C	Q06616	221 aa	Predicted RBP	4.96	□□□□□ -1.62
PCS60	YBR222C	YOL159C	Q08300	171 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	YDL180W	Q12301	547 aa		4.96	□□□□□ -1.62
PCS60	YBR222C	DUR1,2	P32528	1835 aa	Known RBP	4.96	□□□□□ -1.62
PCS60	YBR222C	PAM17	P36147	197 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	YMC2	P38087	329 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	GPX2	P38143	162 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	ARN2	P38724	620 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	SPO73	P40031	143 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	PEX17	P40155	199 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	CYB5	P40312	120 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	FLX1	P40464	311 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	KEG1	P43614	200 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	UBC13	P52490	153 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	ROT1	Q03691	256 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	NCE102	Q12207	173 aa	RIP-Chip data	4.95	□□□□□ -1.62	not detected
PCS60	YBR222C	YDR215C	Q12240	137 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	YER175W-A	Q8TGU4	54 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	MED11	Q99278	115 aa		4.95	□□□□□ -1.62
PCS60	YBR222C	RPS25B	P0C0T4	108 aa	Known RBP	4.94	□□□□□ -1.62
PCS60	YBR222C	GLC7	P32598	312 aa	Known RBP	4.94	□□□□□ -1.62
PCS60	YBR222C	YBR032W	P38223	100 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YJL213W	P40896	331 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	JJJ3	P47138	172 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	TDA4	P47153	279 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	RAF1	Q06891	181 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YDL057W	Q07379	328 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	RPS25A	Q3E792	108 aa	Predicted RBP	4.94	□□□□□ -1.62
PCS60	YBR222C	SUS1	Q6WNK7	96 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	Q0010	Q9ZZX9	128 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	TRP1	P00912	224 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	RAS2	P01120	322 aa	Known RBP	4.94	□□□□□ -1.62
PCS60	YBR222C	YGL010W	P25338	174 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YKL097C	P34245	136 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	SFT2	P38166	215 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YER134C	P40081	178 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YER181C	P40097	107 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	GAT4	P40569	121 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	EMC4	P53073	190 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YGL034C	P53186	121 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	RNH201	P53942	307 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YMR252C	Q04814	134 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	YLR012C	Q07927	99 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	TIM18	Q08749	192 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	SUT2	Q12286	268 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	MHF1	Q3E835	90 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	KSH1	Q8TGJ3	72 aa		4.94	□□□□□ -1.62
PCS60	YBR222C	POR1	P04840	283 aa	Known RBP	4.93	□□□□□ -1.62
PCS60	YBR222C	SHE1	P38200	338 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	RIM8	P53179	542 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	CAX4	P53223	239 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	VHT1	P53241	593 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	FHN1	P53279	174 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	ERV29	P53337	310 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	TOM1	Q03280	3268 aa		4.93	□□□□□ -1.62
PCS60	YBR222C	Q0255	P03881	472 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	MRS4	P23500	304 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	YHR138C	P38841	114 aa	Predicted RBP	4.92	□□□□□ -1.62
PCS60	YBR222C	MPM1	P40364	252 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	PHS1	P40857	217 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	YNL320W	P42840	284 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	GRX5	Q02784	150 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	JID1	Q12350	301 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	YHR214C-E	Q8TGK0	99 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	HTL1	Q9URQ5	78 aa		4.92	□□□□□ -1.62
PCS60	YBR222C	CKS1	P20486	150 aa	Known RBP	4.91	□□□□□ -1.62
PCS60	YBR222C	URA10	P30402	227 aa		4.91	□□□□□ -1.62
PCS60	YBR222C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PCS60	YBR222C	PHO89	P38361	574 aa		4.91	□□□□□ -1.62
PCS60	YBR222C	YNL198C	P40166	100 aa		4.91	□□□□□ -1.62
PCS60	YBR222C	NMA1	Q06178	401 aa	Known RBP	4.91	□□□□□ -1.62
PCS60	YBR222C	KRE1	P17260	313 aa		4.9	□□□□□ -1.62
PCS60	YBR222C	YCR085W	P25650	117 aa		4.9	□□□□□ -1.62
PCS60	YBR222C	CNE1	P27825	502 aa		4.9	□□□□□ -1.62
PCS60	YBR222C	AHT1	P29589	182 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms