RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 NSFP46459 744 aaKnown RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 ZNF132P52740 706 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 EPHB4P54760 987 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 HUNKP57058 714 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 CENPCQ03188 943 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 PPFIA1Q13136 1202 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 PAK2Q13177 524 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 CUL1Q13616 776 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 GRIK4Q16099 956 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 DEFB115Q30KQ5 88 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 CST9Q5W186 159 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 LMBRD2Q68DH5 695 aaPredicted RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 DNAAF5Q86Y56 855 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 PHF13Q86YI8 300 aaPredicted RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 TTC39CQ8N584 583 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 RBBP8NLQ8NC74 664 aaPredicted RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 NPLOC4Q8TAT6 608 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 ZNF564Q8TBZ8 553 aaPredicted RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 AENQ8WTP8 325 aaKnown RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 CAVIN3Q969G5 261 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 ZNF653Q96CK0 615 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 PKNOX2Q96KN3 472 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 RUNDC3BQ96NL0 473 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 KRT12Q99456 494 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 NUP85Q9BW27 656 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 NIF3L1Q9GZT8 377 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 CDT1Q9H211 546 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 VRTNQ9H8Y1 702 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 RAB6BQ9NRW1 208 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.65□□□□□ -0.86
SENP3-203ENST00000580231 CNOT8Q9UFF9 292 aaKnown RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 AKT3Q9Y243 479 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 NOC2LQ9Y3T9 749 aaKnown RBP9.65□□□□□ -0.86
SENP3-203ENST00000580231 PCDHA3Q9Y5H8 950 aa9.65□□□□□ -0.86
SENP3-203ENST00000580231 NRCAMQ92823 1304 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 A0A087WZ62 844 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 STAU1O95793 577 aaKnown RBP9.64□□□□□ -0.87
SENP3-203ENST00000580231 F11P03951 625 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 P4HA1P13674 534 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 GNA15P30679 374 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 TNFSF9P41273 254 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 PEX5P50542 639 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 DNA2P51530 1060 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 IGBP1P78318 339 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 TFAMQ00059 246 aaKnown RBP9.64□□□□□ -0.87
SENP3-203ENST00000580231 MESDQ14696 234 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 HSP90B2PQ58FF3 399 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 ALS2CLQ60I27 953 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 EEF1DP3Q658K8 133 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 CYP4F22Q6NT55 531 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 TMEM270Q6UE05 265 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 THNSL1Q8IYQ7 743 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 MAIP1Q8WWC4 291 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 USP6NLQ92738 828 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 CD101Q93033 1021 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 ACDQ96AP0 544 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 TSPAN18Q96SJ8 248 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 ZSWIM1Q9BR11 485 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 FDXACB1Q9BRP7 624 aaPredicted RBP9.64□□□□□ -0.87
SENP3-203ENST00000580231 ADPGKQ9BRR6 497 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 CYP3A43Q9HB55 503 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.87
SENP3-203ENST00000580231 SMARCAL1Q9NZC9 954 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
SENP3-203ENST00000580231 DERAQ9Y315 318 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 SCINQ9Y6U3 715 aa9.64□□□□□ -0.87
SENP3-203ENST00000580231 A0A1B0GUA9 196 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.63□□□□□ -0.87
SENP3-203ENST00000580231 SMIM35A0A1B0GVV1 85 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 MYO1FO00160 1098 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 SART1O43290 800 aaKnown RBP9.63□□□□□ -0.87
SENP3-203ENST00000580231 MED7O43513 233 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 KPNA6O60684 536 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 HEXIM1O94992 359 aaKnown RBP9.63□□□□□ -0.87
SENP3-203ENST00000580231 IL2RAP01589 272 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 IGHA1P01876 353 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 FGGP02679 453 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 CALB1P05937 261 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 PAEPP09466 180 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 STAG3L1P0CL83 205 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 COMTP21964 271 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 AXLP30530 894 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 CTNNA1P35221 906 aaKnown RBP9.63□□□□□ -0.87
SENP3-203ENST00000580231 RGS2P41220 211 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 AARSP49588 968 aaKnown RBP eCLIP9.63□□□□□ -0.87
SENP3-203ENST00000580231 ZNF157P51786 506 aaPredicted RBP9.63□□□□□ -0.87
SENP3-203ENST00000580231 RWDD2BP57060 319 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 MYL6P60660 151 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 NOMO3P69849 1222 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 FOXK2Q01167 660 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 TAP1Q03518 808 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 PTP4A2Q12974 167 aa9.63□□□□□ -0.87
SENP3-203ENST00000580231 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
SENP3-203ENST00000580231 ZNF699Q32M78 642 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms