RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 DDX42Q86XP3 938 aaKnown RBP eCLIP20.24■□□□□ 0.83
SYF2-204ENST00000476231 ZNF564Q8TBZ8 553 aaPredicted RBP20.24■□□□□ 0.83
SYF2-204ENST00000476231 VCPIP1Q96JH7 1222 aa20.24■□□□□ 0.83
SYF2-204ENST00000476231 TXLNGYQ9BZA5 131 aa20.24■□□□□ 0.83
SYF2-204ENST00000476231 CYP3A43Q9HB55 503 aa20.24■□□□□ 0.83
SYF2-204ENST00000476231 AGAP1Q9UPQ3 857 aa20.24■□□□□ 0.83
SYF2-204ENST00000476231 M0QZ92 97 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 ATMINO43313 823 aaPredicted RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 PPFIA2O75334 1257 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 RPLP2P05387 115 aaKnown RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 MYZAPP0CAP1 466 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 EIF3BP55884 814 aaKnown RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 MRPS6P82932 125 aaKnown RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 CEP85LQ5SZL2 805 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 AGBL2Q5U5Z8 902 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 RSPH3Q86UC2 560 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 KLHDC9Q8NEP7 349 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 CPA5Q8WXQ8 436 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 FAM124BQ9H5Z6 455 aaPredicted RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 NR2E1Q9Y466 385 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 ELNP15502 786 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 NR1D1P20393 614 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 CST5P28325 142 aaPredicted RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 APLP1P51693 650 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 GDF6Q6KF10 455 aaPredicted RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 MON1BQ7L1V2 547 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 SESTD1Q86VW0 696 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 PHF13Q86YI8 300 aaPredicted RBP20.23■□□□□ 0.83
SYF2-204ENST00000476231 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
SYF2-204ENST00000476231 TRPA1O75762 1119 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 LSM8O95777 96 aaKnown RBP20.22■□□□□ 0.83
SYF2-204ENST00000476231 HMGCRP04035 888 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 CFHP08603 1231 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 MESDQ14696 234 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 DNAJC21Q5F1R6 531 aaKnown RBP20.22■□□□□ 0.83
SYF2-204ENST00000476231 ALKAL1Q6UXT8 129 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 TSPAN18Q96SJ8 248 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 PLVAPQ9BX97 442 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 FAM107BQ9H098 131 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 MTUS1Q9ULD2 1270 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 TRPV2Q9Y5S1 764 aa20.22■□□□□ 0.83
SYF2-204ENST00000476231 ASGR1P07306 291 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 PAEPP09466 180 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 PTGIRP43119 386 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 ZBTB6Q15916 424 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 ZNF394Q53GI3 561 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 LIN9Q5TKA1 542 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 JAMLQ86YT9 394 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 CD99L2Q8TCZ2 262 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 KRT35Q92764 455 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 FMO2Q99518 471 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
SYF2-204ENST00000476231 ZDHHC18Q9NUE0 388 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 PCDHGC3Q9UN70 934 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 RRP15Q9Y3B9 282 aaKnown RBP20.21■□□□□ 0.83
SYF2-204ENST00000476231 MAP2K2P36507 400 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 C1QBPQ07021 282 aaKnown RBP20.21■□□□□ 0.83
SYF2-204ENST00000476231 KCNA10Q16322 511 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 FAM47CQ5HY64 1035 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 UBXN11Q5T124 520 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 MAP3K21Q5TCX8 1036 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 CCSAPQ6IQ19 270 aaPredicted RBP20.21■□□□□ 0.83
SYF2-204ENST00000476231 RPAINQ86UA6 219 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 SERINC5Q86VE9 423 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 PASD1Q8IV76 773 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 TTC39CQ8N584 583 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 PRELID2Q8N945 189 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 C12orf50Q8NA57 414 aaPredicted RBP20.21■□□□□ 0.83
SYF2-204ENST00000476231 PCSK9Q8NBP7 692 aaKnown RBP20.21■□□□□ 0.83
SYF2-204ENST00000476231 BEST2Q8NFU1 509 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 ZNF518BQ9C0D4 1074 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 CDY2AQ9Y6F7 541 aa20.21■□□□□ 0.83
SYF2-204ENST00000476231 RECQL4O94761 1208 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 GNRH1P01148 92 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 BRD2P25440 801 aaKnown RBP20.2■□□□□ 0.82
SYF2-204ENST00000476231 RAP1GAPP47736 663 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 RWDD2BP57060 319 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 ZNF844Q08AG5 666 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 MYO1EQ12965 1108 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 ZNF211Q13398 564 aaPredicted RBP20.2■□□□□ 0.82
SYF2-204ENST00000476231 SLC13A5Q86YT5 568 aaPredicted RBP20.2■□□□□ 0.82
SYF2-204ENST00000476231 ZMAT2Q96NC0 199 aaKnown RBP20.2■□□□□ 0.82
SYF2-204ENST00000476231 SDCBP2Q9H190 292 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 SMYD3Q9H7B4 428 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 ADAM22Q9P0K1 906 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 CHORDC1Q9UHD1 332 aaPredicted RBP20.2■□□□□ 0.82
SYF2-204ENST00000476231 HES2Q9Y543 173 aa20.2■□□□□ 0.82
SYF2-204ENST00000476231 MED7O43513 233 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 RRM1P23921 792 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 SLC1A1P43005 524 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 FNTAP49354 379 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 CDH8P55286 799 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 DHX9Q08211 1270 aaKnown RBP20.19■□□□□ 0.82
SYF2-204ENST00000476231 KCTD16Q68DU8 428 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 FOXR1Q6PIV2 292 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 FAM228AQ86W67 206 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms