RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W TY2B-LR1P0C2J3 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-FP0CX63 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-GR2P0CX64 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-CP25384 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-DR2Q03494 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY1B-DR1Q03855 1755 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-DR3Q07791 1770 aaKnown RBP1.2□□□□□ -2.22
BRO1YPL084W TY2B-OR1Q12113 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-DR1Q12472 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TY2B-OR2Q12501 1770 aa1.2□□□□□ -2.22
BRO1YPL084W TRX3P25372 127 aa1.2□□□□□ -2.22
BRO1YPL084W PAN3P36102 679 aaPredicted RBP1.2□□□□□ -2.22
BRO1YPL084W CAF4P36130 643 aa1.2□□□□□ -2.22
BRO1YPL084W YEA4P40004 342 aa1.2□□□□□ -2.22
BRO1YPL084W TSC11P40061 1430 aa1.2□□□□□ -2.22
BRO1YPL084W YJR111CP47148 283 aaKnown RBP1.2□□□□□ -2.22
BRO1YPL084W UBC12P52491 188 aa1.2□□□□□ -2.22
BRO1YPL084W ARO8P53090 500 aaKnown RBP1.2□□□□□ -2.22
BRO1YPL084W HOP2P53187 214 aa1.2□□□□□ -2.22
BRO1YPL084W MPC3P53311 146 aa1.2□□□□□ -2.22
BRO1YPL084W RTC4P53850 401 aa1.2□□□□□ -2.22
BRO1YPL084W YOL014WQ08110 124 aa1.2□□□□□ -2.22
BRO1YPL084W RAD28Q12021 506 aa1.2□□□□□ -2.22
BRO1YPL084W TAH1P25638 111 aaPredicted RBP1.2□□□□□ -2.22
BRO1YPL084W SER2P42941 309 aa1.2□□□□□ -2.22
BRO1YPL084W SKI6P46948 246 aaPredicted RBP1.2□□□□□ -2.22
BRO1YPL084W ATG38Q05789 226 aaKnown RBP1.2□□□□□ -2.22
BRO1YPL084W YLR031WQ07978 186 aa1.2□□□□□ -2.22
BRO1YPL084W YMR099CQ03161 297 aaKnown RBP1.19□□□□□ -2.22
BRO1YPL084W CUE4Q04201 117 aaPredicted RBP1.19□□□□□ -2.22
BRO1YPL084W YML100W-AQ8TGT0 57 aa1.19□□□□□ -2.22
BRO1YPL084W SNF4P12904 322 aa1.19□□□□□ -2.22
BRO1YPL084W SPO13P23624 291 aa1.19□□□□□ -2.22
BRO1YPL084W YGL010WP25338 174 aa1.19□□□□□ -2.22
BRO1YPL084W ATP7P30902 174 aa1.19□□□□□ -2.22
BRO1YPL084W NUP49Q02199 472 aa1.19□□□□□ -2.22
BRO1YPL084W QCR8P08525 94 aa1.18□□□□□ -2.22
BRO1YPL084W RPL2AP0CX45 254 aaKnown RBP1.18□□□□□ -2.22
BRO1YPL084W RPL2BP0CX46 254 aaKnown RBP1.18□□□□□ -2.22
BRO1YPL084W VMA22P38784 181 aa1.18□□□□□ -2.22
BRO1YPL084W SNO1Q03144 224 aa1.18□□□□□ -2.22
BRO1YPL084W GRX8Q05926 109 aa1.18□□□□□ -2.22
BRO1YPL084W YLR036CQ07986 203 aa1.18□□□□□ -2.22
BRO1YPL084W YAR023CD6VPM8 179 aa1.18□□□□□ -2.22
BRO1YPL084W SEC11P15367 167 aa1.18□□□□□ -2.22
BRO1YPL084W YBR220CP38318 560 aa1.18□□□□□ -2.22
BRO1YPL084W YER134CP40081 178 aa1.18□□□□□ -2.22
BRO1YPL084W RPL13BP40212 199 aaKnown RBP1.18□□□□□ -2.22
BRO1YPL084W NRK1P53915 240 aa1.18□□□□□ -2.22
BRO1YPL084W DYN3Q04949 312 aa1.18□□□□□ -2.22
BRO1YPL084W GRE1Q08969 168 aa1.18□□□□□ -2.22
BRO1YPL084W RPL13AQ12690 199 aaPredicted RBP1.18□□□□□ -2.22
BRO1YPL084W CYR1P08678 2026 aaKnown RBP1.18□□□□□ -2.22
BRO1YPL084W SHG1P38337 142 aa1.17□□□□□ -2.22
BRO1YPL084W YDL085C-AQ3E7B7 68 aaKnown RBP1.17□□□□□ -2.22
BRO1YPL084W TY1B-JR2P47100 1755 aaKnown RBP1.17□□□□□ -2.22
BRO1YPL084W TY1B-ER2Q03619 1755 aa1.17□□□□□ -2.22
BRO1YPL084W TY1B-MR1Q04214 1755 aa1.17□□□□□ -2.22
BRO1YPL084W TY1B-MR2Q04670 1755 aaKnown RBP1.17□□□□□ -2.22
BRO1YPL084W TY1B-LR1Q12088 1755 aaKnown RBP1.17□□□□□ -2.22
BRO1YPL084W TY1B-NL1Q12112 1755 aa1.17□□□□□ -2.22
BRO1YPL084W TY1B-GR1Q12141 1755 aa1.17□□□□□ -2.22
BRO1YPL084W TY1B-BLQ12490 1755 aa1.17□□□□□ -2.22
BRO1YPL084W GPA2P10823 449 aa1.17□□□□□ -2.22
BRO1YPL084W UPS2P35200 230 aa1.17□□□□□ -2.22
BRO1YPL084W YPL073CP40323 161 aa1.17□□□□□ -2.22
BRO1YPL084W YMR295CQ03559 197 aa1.17□□□□□ -2.22
BRO1YPL084W TY2B-BQ12491 1770 aa1.16□□□□□ -2.22
BRO1YPL084W FPR1P20081 114 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W SEC72P39742 193 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W TDA4P47153 279 aa1.16□□□□□ -2.22
BRO1YPL084W AIM34Q03673 198 aa1.16□□□□□ -2.22
BRO1YPL084W BRX1Q08235 291 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W YDL180WQ12301 547 aa1.16□□□□□ -2.22
BRO1YPL084W RPS24AP0CX31 135 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W RPS24BP0CX32 135 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W MTW1P39731 289 aa1.16□□□□□ -2.22
BRO1YPL084W YER034WP40022 185 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W YMR315WQ04869 349 aaKnown RBP1.16□□□□□ -2.22
BRO1YPL084W YPR174CQ06616 221 aaPredicted RBP1.16□□□□□ -2.22
BRO1YPL084W SKI3P17883 1432 aaKnown RBP1.15□□□□□ -2.23
BRO1YPL084W YKR041WP36134 250 aa1.15□□□□□ -2.23
BRO1YPL084W FMP23P38231 175 aa1.15□□□□□ -2.23
BRO1YPL084W NAT3Q06504 195 aa1.15□□□□□ -2.23
BRO1YPL084W YET3Q07451 203 aa1.15□□□□□ -2.23
BRO1YPL084W IRC23Q08416 157 aa1.15□□□□□ -2.23
BRO1YPL084W UBR2Q07963 1872 aa1.15□□□□□ -2.23
BRO1YPL084W GCY1P14065 312 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
BRO1YPL084W TVP38P36164 337 aa1.15□□□□□ -2.23
BRO1YPL084W SHH3Q04487 196 aa1.15□□□□□ -2.23
BRO1YPL084W FAS1P07149 2051 aaKnown RBP1.14□□□□□ -2.23
BRO1YPL084W TIR1P10863 254 aa1.14□□□□□ -2.23
BRO1YPL084W NSP1P14907 823 aaKnown RBP1.14□□□□□ -2.23
BRO1YPL084W MGT1P26188 188 aa1.14□□□□□ -2.23
BRO1YPL084W POG1P40473 351 aa1.14□□□□□ -2.23
BRO1YPL084W YFL019CP43576 117 aa1.14□□□□□ -2.23
BRO1YPL084W PGA1P53896 198 aa1.14□□□□□ -2.23
BRO1YPL084W YHR007C-AQ07074 71 aa1.14□□□□□ -2.23
BRO1YPL084W YPR014CQ6B0W2 109 aa1.14□□□□□ -2.23
BRO1YPL084W ROM2P51862 1356 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms