RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W SVP26P38869 228 aa-0.2□□□□□ -2.44
PRP39YML046W PGD1P40356 397 aa-0.2□□□□□ -2.44
PRP39YML046W YKE4P40544 346 aa-0.2□□□□□ -2.44
PRP39YML046W XPT1P47165 209 aa-0.2□□□□□ -2.44
PRP39YML046W YJR149WP47177 404 aa-0.2□□□□□ -2.44
PRP39YML046W YGR026WP53217 278 aa-0.2□□□□□ -2.44
PRP39YML046W YNL122CP53921 115 aaPredicted RBP-0.2□□□□□ -2.44
PRP39YML046W YDC1Q02896 317 aa-0.2□□□□□ -2.44
PRP39YML046W RRP40Q08285 240 aaKnown RBP-0.2□□□□□ -2.44
PRP39YML046W NIP7Q08962 181 aaKnown RBP-0.2□□□□□ -2.44
PRP39YML046W FCY1Q12178 158 aa-0.2□□□□□ -2.44
PRP39YML046W PRX1P34227 261 aaKnown RBP-0.21□□□□□ -2.44
PRP39YML046W CBT1P36038 271 aaPredicted RBP-0.21□□□□□ -2.44
PRP39YML046W RCN1P36054 211 aa-0.21□□□□□ -2.44
PRP39YML046W YHL049CP38722 271 aa-0.21□□□□□ -2.44
PRP39YML046W COX15P40086 486 aa-0.21□□□□□ -2.44
PRP39YML046W PDS1P40316 373 aaPredicted RBP-0.21□□□□□ -2.44
PRP39YML046W RFC2P40348 353 aa-0.21□□□□□ -2.44
PRP39YML046W YIA6P40556 373 aa-0.21□□□□□ -2.44
PRP39YML046W TDA4P47153 279 aa-0.21□□□□□ -2.44
PRP39YML046W GPI17Q04080 534 aa-0.21□□□□□ -2.44
PRP39YML046W DBP9Q06218 594 aaKnown RBP-0.21□□□□□ -2.44
PRP39YML046W YOL160WQ08321 113 aa-0.21□□□□□ -2.44
PRP39YML046W RPC40P07703 335 aaKnown RBP-0.22□□□□□ -2.44
PRP39YML046W SPS2P08459 502 aa-0.22□□□□□ -2.44
PRP39YML046W NHP6BP11633 99 aaKnown RBP-0.22□□□□□ -2.44
PRP39YML046W OPI1P21957 404 aa-0.22□□□□□ -2.44
PRP39YML046W DAD2P36162 133 aa-0.22□□□□□ -2.44
PRP39YML046W DER1P38307 211 aa-0.22□□□□□ -2.44
PRP39YML046W HTD2P38790 280 aaKnown RBP-0.22□□□□□ -2.44
PRP39YML046W NSG1P38837 291 aa-0.22□□□□□ -2.44
PRP39YML046W AIM20P40451 204 aa-0.22□□□□□ -2.44
PRP39YML046W ARC15P40518 154 aaRIP-Chip data-0.22□□□□□ -2.44not detected
PRP39YML046W APQ12P40532 138 aa-0.22□□□□□ -2.44
PRP39YML046W MIC26P50087 233 aa-0.22□□□□□ -2.44
PRP39YML046W YGL185CP53100 379 aa-0.22□□□□□ -2.44
PRP39YML046W TIM21P53220 239 aa-0.22□□□□□ -2.44
PRP39YML046W NRK1P53915 240 aa-0.22□□□□□ -2.44
PRP39YML046W CTF19Q02732 369 aa-0.22□□□□□ -2.44
PRP39YML046W NCE101Q02820 53 aa-0.22□□□□□ -2.44
PRP39YML046W SWC7Q06707 132 aa-0.22□□□□□ -2.44
PRP39YML046W PAA1Q12447 191 aaKnown RBP-0.22□□□□□ -2.44
PRP39YML046W ATP6P00854 259 aa-0.22□□□□□ -2.45
PRP39YML046W RPB3P16370 318 aaKnown RBP-0.22□□□□□ -2.45
PRP39YML046W MAK5P38112 773 aaPredicted RBP-0.22□□□□□ -2.45
PRP39YML046W YHR125WP38831 101 aa-0.22□□□□□ -2.45
PRP39YML046W NSA2P40078 261 aaKnown RBP-0.22□□□□□ -2.45
PRP39YML046W FLX1P40464 311 aa-0.22□□□□□ -2.45
PRP39YML046W EMC5P40540 141 aa-0.22□□□□□ -2.45
PRP39YML046W PNC1P53184 216 aaKnown RBP-0.22□□□□□ -2.45
PRP39YML046W EFM5P53200 248 aaKnown RBP-0.22□□□□□ -2.45
PRP39YML046W YDR102CQ03864 110 aa-0.22□□□□□ -2.45
PRP39YML046W YDL241WQ07738 123 aa-0.22□□□□□ -2.45
PRP39YML046W NFI1Q12216 726 aa-0.22□□□□□ -2.45
PRP39YML046W RRT15Q3E811 62 aa-0.22□□□□□ -2.45
PRP39YML046W RPS11AP0CX47 156 aaKnown RBP-0.23□□□□□ -2.45
PRP39YML046W RPS11BP0CX48 156 aaKnown RBP-0.23□□□□□ -2.45
PRP39YML046W COX7P10174 60 aa-0.23□□□□□ -2.45
PRP39YML046W SEC22P22214 214 aa-0.23□□□□□ -2.45
PRP39YML046W SRB4P32569 687 aa-0.23□□□□□ -2.45
PRP39YML046W TMA19P35691 167 aaKnown RBP-0.23□□□□□ -2.45
PRP39YML046W MRPL24P36525 258 aaPredicted RBP-0.23□□□□□ -2.45
PRP39YML046W LDB7P38210 180 aa-0.23□□□□□ -2.45
PRP39YML046W YBR016WP38216 128 aa-0.23□□□□□ -2.45
PRP39YML046W SWC5P38326 303 aa-0.23□□□□□ -2.45
PRP39YML046W MEP1P40260 492 aa-0.23□□□□□ -2.45
PRP39YML046W SLX9P53251 210 aaPredicted RBP-0.23□□□□□ -2.45
PRP39YML046W TIM13P53299 105 aa-0.23□□□□□ -2.45
PRP39YML046W LPP1Q04396 274 aa-0.23□□□□□ -2.45
PRP39YML046W FIT1Q04433 528 aa-0.23□□□□□ -2.45
PRP39YML046W SSQ1Q05931 657 aaPredicted RBP-0.23□□□□□ -2.45
PRP39YML046W NEJ1Q06148 342 aa-0.23□□□□□ -2.45
PRP39YML046W IRC19Q07843 230 aa-0.23□□□□□ -2.45
PRP39YML046W ATG40Q99325 256 aa-0.23□□□□□ -2.45
PRP39YML046W RNR2P09938 399 aaKnown RBP-0.24□□□□□ -2.45
PRP39YML046W TAL1P15019 335 aaKnown RBP-0.24□□□□□ -2.45
PRP39YML046W FCY2P17064 533 aa-0.24□□□□□ -2.45
PRP39YML046W VPS21P36017 210 aaKnown RBP-0.24□□□□□ -2.45
PRP39YML046W ETR1P38071 380 aa-0.24□□□□□ -2.45
PRP39YML046W NAS2P40555 220 aa-0.24□□□□□ -2.45
PRP39YML046W YFL065CP43539 102 aa-0.24□□□□□ -2.45
PRP39YML046W YJR015WP47090 510 aa-0.24□□□□□ -2.45
PRP39YML046W YJR128WP47162 119 aa-0.24□□□□□ -2.45
PRP39YML046W RPS12P48589 143 aaKnown RBP-0.24□□□□□ -2.45
PRP39YML046W YPL067CQ02754 198 aa-0.24□□□□□ -2.45
PRP39YML046W SPO19Q03029 223 aa-0.24□□□□□ -2.45
PRP39YML046W GOT1Q03554 138 aa-0.24□□□□□ -2.45
PRP39YML046W HEM25Q07534 307 aa-0.24□□□□□ -2.45
PRP39YML046W OCA6Q12454 224 aa-0.24□□□□□ -2.45
PRP39YML046W YPR010C-AA5Z2X5 72 aa-0.24□□□□□ -2.45
PRP39YML046W MRPL25P23369 157 aa-0.24□□□□□ -2.45
PRP39YML046W NTG1P31378 399 aa-0.24□□□□□ -2.45
PRP39YML046W MSN4P33749 630 aa-0.24□□□□□ -2.45
PRP39YML046W MSA2P36157 363 aa-0.24□□□□□ -2.45
PRP39YML046W MIC12P38341 106 aa-0.24□□□□□ -2.45
PRP39YML046W COS8P38723 381 aa-0.24□□□□□ -2.45
PRP39YML046W RMD6P39975 231 aa-0.24□□□□□ -2.45
PRP39YML046W YER134CP40081 178 aa-0.24□□□□□ -2.45
PRP39YML046W RIO2P40160 425 aaKnown RBP-0.24□□□□□ -2.45
PRP39YML046W DCV1P43595 202 aa-0.24□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms