RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	AVO2	Q04749	426 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	YMR253C	Q04835	414 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	YOR352W	Q08816	343 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	PIS1	P06197	220 aa	Known RBP	3.1	□□□□□ -1.91
LOS1	YKL205W	YPT31	P38555	223 aa	Known RBP	3.1	□□□□□ -1.91
LOS1	YKL205W	COX16	P47081	118 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	YGL117W	P53133	265 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	YHP1	Q04116	353 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	HTB2	P02294	131 aa		3.09	□□□□□ -1.91
LOS1	YKL205W	OLE1	P21147	510 aa	Known RBP	3.09	□□□□□ -1.91
LOS1	YKL205W	HAM1	P47119	197 aa	Known RBP	3.09	□□□□□ -1.91
LOS1	YKL205W	CRH1	P53301	507 aa		3.09	□□□□□ -1.91
LOS1	YKL205W	YMR090W	Q04304	227 aa	Known RBP	3.09	□□□□□ -1.91
LOS1	YKL205W	SPG4	Q04438	115 aa		3.09	□□□□□ -1.91
LOS1	YKL205W	RFM1	Q12192	310 aa		3.09	□□□□□ -1.91
LOS1	YKL205W	RPL12A	P0CX53	165 aa	Known RBP	3.09	□□□□□ -1.91
LOS1	YKL205W	RPL12B	P0CX54	165 aa		3.09	□□□□□ -1.91
LOS1	YKL205W	MRPL20	P22354	195 aa	Predicted RBP	3.09	□□□□□ -1.91
LOS1	YKL205W	CDS1	P38221	457 aa		3.09	□□□□□ -1.91
LOS1	YKL205W	NSA2	P40078	261 aa	Known RBP	3.09	□□□□□ -1.91
LOS1	YKL205W	MAG1	P22134	296 aa	Known RBP	3.09	□□□□□ -1.92
LOS1	YKL205W	MTC7	P32633	139 aa		3.09	□□□□□ -1.92
LOS1	YKL205W	YIP1	P53039	248 aa		3.09	□□□□□ -1.92
LOS1	YKL205W	ATG39	Q06159	398 aa		3.09	□□□□□ -1.92
LOS1	YKL205W	YPR063C	Q12160	140 aa		3.09	□□□□□ -1.92
LOS1	YKL205W	YBR184W	P38299	523 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	LOC1	P43586	204 aa	Predicted RBP	3.08	□□□□□ -1.92
LOS1	YKL205W	AIM24	P47127	394 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	YDL009C	Q12210	107 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	AME1	P38313	324 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	CTR2	P38865	189 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	BNA2	P47125	453 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	YLR342W-A	Q3E810	57 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	RNA15	P25299	296 aa	Predicted RBP	3.08	□□□□□ -1.92
LOS1	YKL205W	YHR173C	P38864	112 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	YER121W	P40076	114 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	MGA1	P53050	456 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	YNR071C	P53757	342 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	HOR7	Q05827	59 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	TMC1	Q08422	150 aa	Predicted RBP	3.08	□□□□□ -1.92
LOS1	YKL205W	ERV2	Q12284	196 aa		3.08	□□□□□ -1.92
LOS1	YKL205W	YLL053C	P0CD98	152 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	YKL102C	P34249	101 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	EMC5	P40540	141 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	YDR415C	Q04033	374 aa	Predicted RBP	3.07	□□□□□ -1.92
LOS1	YKL205W	SDH7	Q04401	133 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	STP4	Q07351	490 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	PBP4	Q07362	185 aa	Known RBP	3.07	□□□□□ -1.92
LOS1	YKL205W	IZH3	Q07959	543 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	SWT1	Q12104	458 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	YNL146C-A	Q3E7Z1	64 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	PUP1	P25043	261 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	MSK1	P32048	576 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	MIC27	P50945	234 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	ATG5	Q12380	294 aa		3.07	□□□□□ -1.92
LOS1	YKL205W	RPP1A	P05318	106 aa	Predicted RBP	3.06	□□□□□ -1.92
LOS1	YKL205W	HMRA1	P0CY11	126 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	QRI5	P32344	111 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	SDH4	P37298	181 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PRE3	P38624	215 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YER188W	P40103	239 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	VPS55	P47111	140 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YJR111C	P47148	283 aa	Known RBP	3.06	□□□□□ -1.92
LOS1	YKL205W	LYS5	P50113	272 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YGL262W	P53054	175 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YNL234W	P53857	426 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	NDE2	Q07500	545 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YPL162C	Q12042	273 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	RNH203	Q12338	110 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	SPO13	P23624	291 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	HMX1	P32339	317 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	SRB6	P32570	121 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	IMD2	P38697	523 aa	Known RBP	3.06	□□□□□ -1.92
LOS1	YKL205W	TIF11	P38912	153 aa	Known RBP	3.06	□□□□□ -1.92
LOS1	YKL205W	SRP14	P38985	146 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YJR096W	P47137	282 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	CPD1	P53314	239 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PRM3	Q08931	133 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	YLR146W-A	Q2V2P1	62 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU1	P0CE88	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU14	P0CE89	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU6	P0CE90	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU18	P0CE91	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU8	P0CE92	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU11	P0CE93	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	NOP1	P15646	327 aa	Known RBP	3.06	□□□□□ -1.92
LOS1	YKL205W	UPS2	P35200	230 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU13	P38725	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	LCB3	P47013	409 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU10	Q03050	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	LRS4	Q04087	347 aa	Known RBP	3.06	□□□□□ -1.92
LOS1	YKL205W	RRT7	Q07829	113 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	LDS2	Q08218	356 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU20	Q08322	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	PAU9	Q3E770	120 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	CMC2	Q3E7A4	109 aa		3.06	□□□□□ -1.92
LOS1	YKL205W	VAR1	P02381	398 aa		3.05	□□□□□ -1.92
LOS1	YKL205W	POR2	P40478	281 aa		3.05	□□□□□ -1.92
LOS1	YKL205W	PKP2	P53170	491 aa		3.05	□□□□□ -1.92
LOS1	YKL205W	SHH3	Q04487	196 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 92.2 ms