RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A SPC25P40014 221 aa1.88□□□□□ -2.11
SFT1YKL006C-A AGE2P40529 298 aa1.88□□□□□ -2.11
SFT1YKL006C-A GLR1P41921 483 aaKnown RBP1.88□□□□□ -2.11
SFT1YKL006C-A BOL2P53082 120 aa1.88□□□□□ -2.11
SFT1YKL006C-A YGR219WP53307 113 aa1.88□□□□□ -2.11
SFT1YKL006C-A SLM2P53955 656 aa1.88□□□□□ -2.11
SFT1YKL006C-A RGM1Q00453 211 aa1.88□□□□□ -2.11
SFT1YKL006C-A MRPS8Q03799 155 aa1.88□□□□□ -2.11
SFT1YKL006C-A RDS3Q06835 107 aaPredicted RBP1.88□□□□□ -2.11
SFT1YKL006C-A ATP20Q12233 115 aa1.88□□□□□ -2.11
SFT1YKL006C-A YOR214CQ12282 236 aa1.88□□□□□ -2.11
SFT1YKL006C-A RIB3Q99258 208 aa1.88□□□□□ -2.11
SFT1YKL006C-A SHE2P36068 246 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SFT1YKL006C-A NSA2P40078 261 aaKnown RBP1.87□□□□□ -2.11
SFT1YKL006C-A YER181CP40097 107 aa1.87□□□□□ -2.11
SFT1YKL006C-A YPL073CP40323 161 aa1.87□□□□□ -2.11
SFT1YKL006C-A PHB1P40961 287 aa1.87□□□□□ -2.11
SFT1YKL006C-A CIS3P47001 227 aa1.87□□□□□ -2.11
SFT1YKL006C-A SBH1P52870 82 aa1.87□□□□□ -2.11
SFT1YKL006C-A YMR295CQ03559 197 aa1.87□□□□□ -2.11
SFT1YKL006C-A CSN9Q03981 162 aa1.87□□□□□ -2.11
SFT1YKL006C-A YMR253CQ04835 414 aa1.87□□□□□ -2.11
SFT1YKL006C-A HRD1Q08109 551 aa1.87□□□□□ -2.11
SFT1YKL006C-A VPS68Q12016 184 aa1.87□□□□□ -2.11
SFT1YKL006C-A YLR361C-AQ3E795 98 aa1.87□□□□□ -2.11
SFT1YKL006C-A ATG40Q99325 256 aa1.87□□□□□ -2.11
SFT1YKL006C-A PHO85P17157 305 aa1.86□□□□□ -2.11
SFT1YKL006C-A PEX4P29340 183 aa1.86□□□□□ -2.11
SFT1YKL006C-A SPT14P32363 452 aa1.86□□□□□ -2.11
SFT1YKL006C-A FZF1P32805 299 aa1.86□□□□□ -2.11
SFT1YKL006C-A PTC1P35182 281 aa1.86□□□□□ -2.11
SFT1YKL006C-A YBR220CP38318 560 aa1.86□□□□□ -2.11
SFT1YKL006C-A CUP9P41817 306 aa1.86□□□□□ -2.11
SFT1YKL006C-A YFR054CP43622 192 aa1.86□□□□□ -2.11
SFT1YKL006C-A CCC1P47818 322 aa1.86□□□□□ -2.11
SFT1YKL006C-A TIM13P53299 105 aa1.86□□□□□ -2.11
SFT1YKL006C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
SFT1YKL006C-A PST2Q12335 198 aaKnown RBP1.86□□□□□ -2.11
SFT1YKL006C-A DUR1,2P32528 1835 aaKnown RBP1.85□□□□□ -2.11
SFT1YKL006C-A PAM17P36147 197 aa1.85□□□□□ -2.11
SFT1YKL006C-A RRT1P38192 103 aa1.85□□□□□ -2.11
SFT1YKL006C-A ERV15P38312 142 aa1.85□□□□□ -2.11
SFT1YKL006C-A TIR3P40552 269 aa1.85□□□□□ -2.11
SFT1YKL006C-A YNL033WP53964 284 aa1.85□□□□□ -2.11
SFT1YKL006C-A UBC7Q02159 165 aa1.85□□□□□ -2.11
SFT1YKL006C-A YKR005CQ02203 525 aa1.85□□□□□ -2.11
SFT1YKL006C-A VPS28Q02767 242 aa1.85□□□□□ -2.11
SFT1YKL006C-A FMN1Q03778 218 aa1.85□□□□□ -2.11
SFT1YKL006C-A SHH3Q04487 196 aa1.85□□□□□ -2.11
SFT1YKL006C-A SYM1Q06563 197 aa1.85□□□□□ -2.11
SFT1YKL006C-A RFU1Q08003 200 aa1.85□□□□□ -2.11
SFT1YKL006C-A IRC23Q08416 157 aa1.85□□□□□ -2.11
SFT1YKL006C-A YLR236CA0A023PZG4 107 aa1.84□□□□□ -2.11
SFT1YKL006C-A PHO13P19881 312 aa1.84□□□□□ -2.11
SFT1YKL006C-A SCL1P21243 252 aaKnown RBP1.84□□□□□ -2.11
SFT1YKL006C-A HSP30P25619 332 aa1.84□□□□□ -2.11
SFT1YKL006C-A CLB6P32943 380 aa1.84□□□□□ -2.11
SFT1YKL006C-A YOR062CP36025 268 aa1.84□□□□□ -2.11
SFT1YKL006C-A PHO88P38264 188 aaPredicted RBP1.84□□□□□ -2.11
SFT1YKL006C-A PRS3P38689 320 aaKnown RBP1.84□□□□□ -2.11
SFT1YKL006C-A YNL217WP40152 326 aa1.84□□□□□ -2.11
SFT1YKL006C-A YJL218WP40892 196 aaKnown RBP1.84□□□□□ -2.11
SFT1YKL006C-A TIM8P57744 87 aa1.84□□□□□ -2.11
SFT1YKL006C-A DYN2Q02647 92 aa1.84□□□□□ -2.11
SFT1YKL006C-A COF1Q03048 143 aaKnown RBP1.84□□□□□ -2.11
SFT1YKL006C-A YPD1Q07688 167 aa1.84□□□□□ -2.11
SFT1YKL006C-A ECM5Q03214 1411 aa1.83□□□□□ -2.12
SFT1YKL006C-A TRM3Q07527 1436 aa1.83□□□□□ -2.12
SFT1YKL006C-A RAD6P06104 172 aa1.83□□□□□ -2.12
SFT1YKL006C-A SUA7P29055 345 aaPredicted RBP1.83□□□□□ -2.12
SFT1YKL006C-A MRPL24P36525 258 aaPredicted RBP1.83□□□□□ -2.12
SFT1YKL006C-A TRS20P38334 175 aa1.83□□□□□ -2.12
SFT1YKL006C-A VMA22P38784 181 aa1.83□□□□□ -2.12
SFT1YKL006C-A HTD2P38790 280 aaKnown RBP1.83□□□□□ -2.12
SFT1YKL006C-A TVP23P38962 199 aa1.83□□□□□ -2.12
SFT1YKL006C-A YEL028WP39989 153 aa1.83□□□□□ -2.12
SFT1YKL006C-A YGL193CP53097 103 aa1.83□□□□□ -2.12
SFT1YKL006C-A DAD3P69850 94 aa1.83□□□□□ -2.12
SFT1YKL006C-A EMC6Q12431 108 aa1.83□□□□□ -2.12
SFT1YKL006C-A YOR381W-AQ3E804 55 aa1.83□□□□□ -2.12
SFT1YKL006C-A RAS2P01120 322 aaKnown RBP1.82□□□□□ -2.12
SFT1YKL006C-A NHP6AP11632 93 aaKnown RBP1.82□□□□□ -2.12
SFT1YKL006C-A SVP26P38869 228 aa1.82□□□□□ -2.12
SFT1YKL006C-A GLC8P41818 229 aa1.82□□□□□ -2.12
SFT1YKL006C-A YDR366CP87287 132 aa1.82□□□□□ -2.12
SFT1YKL006C-A YDR102CQ03864 110 aa1.82□□□□□ -2.12
SFT1YKL006C-A RNH202Q05635 350 aa1.82□□□□□ -2.12
SFT1YKL006C-A RPC19P28000 142 aaKnown RBP1.81□□□□□ -2.12
SFT1YKL006C-A YRA2P36036 203 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
SFT1YKL006C-A YEL073CP39974 107 aa1.81□□□□□ -2.12
SFT1YKL006C-A HHO1P53551 258 aa1.81□□□□□ -2.12
SFT1YKL006C-A RCF2P53721 224 aa1.81□□□□□ -2.12
SFT1YKL006C-A RAD50P12753 1312 aa1.81□□□□□ -2.12
SFT1YKL006C-A YLR422WQ06409 1932 aa1.81□□□□□ -2.12
SFT1YKL006C-A YOL162WP0CF19 215 aa1.8□□□□□ -2.12
SFT1YKL006C-A SRP21P32342 167 aa1.8□□□□□ -2.12
SFT1YKL006C-A YBR209WP38311 105 aa1.8□□□□□ -2.12
SFT1YKL006C-A YHR022CP38763 256 aa1.8□□□□□ -2.12
SFT1YKL006C-A RIO2P40160 425 aaKnown RBP1.8□□□□□ -2.12
SFT1YKL006C-A CIN5P40917 295 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms