RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	DSE2	P38844	325 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	YEA4	P40004	342 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	AYR1	P40471	297 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	SER2	P42941	309 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	ORM1	P53224	222 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	YMR315W	Q04869	349 aa	Known RBP	1.84	□□□□□ -2.11
VMA10	YHR039C-A	LDB18	Q07887	179 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	DGA1	Q08650	418 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	YLR050C	Q12155	161 aa	Known RBP	1.84	□□□□□ -2.11
VMA10	YHR039C-A	BOL1	Q3E793	110 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	ODC2	Q99297	307 aa		1.84	□□□□□ -2.11
VMA10	YHR039C-A	FZF1	P32805	299 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	SUI1	P32911	108 aa	Known RBP	1.83	□□□□□ -2.12
VMA10	YHR039C-A	TVP38	P36164	337 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	IPI1	P38803	334 aa	Predicted RBP	1.83	□□□□□ -2.12
VMA10	YHR039C-A	AIM2	P39721	246 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	CWC27	Q02770	301 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	CSN9	Q03981	162 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	PLP1	Q04004	230 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	EFG1	Q3E705	233 aa	Known RBP	1.83	□□□□□ -2.12
VMA10	YHR039C-A	ATG40	Q99325	256 aa		1.83	□□□□□ -2.12
VMA10	YHR039C-A	YOR304C-A	O14468	76 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	MDH2	P22133	377 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	YCR023C	P25351	611 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	AHC2	P25649	128 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	SUA7	P29055	345 aa	Predicted RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	TFC1	P32367	649 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	PAN3	P36102	679 aa	Predicted RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	GAA1	P39012	614 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	RIO2	P40160	425 aa	Known RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	GPI14	P47088	403 aa	Known RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	TDA4	P47153	279 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	RBL2	P48606	106 aa	Known RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	YGR017W	P53210	297 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	MPC3	P53311	146 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	MPA43	P53583	542 aa	Predicted RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	PGA1	P53896	198 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	TIM8	P57744	87 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	UBC7	Q02159	165 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	SML1	Q04964	104 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	RDI1	Q12434	202 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	YIR021W-A	Q3E739	70 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	SLO1	Q3E784	85 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	RIB3	Q99258	208 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	ESC1	Q03661	1658 aa	Known RBP	1.82	□□□□□ -2.12
VMA10	YHR039C-A	TY1B-DR1	Q03855	1755 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	TY1B-BR	Q12193	1756 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	TY1B-DR3	Q99231	1755 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	MET5	P47169	1442 aa		1.82	□□□□□ -2.12
VMA10	YHR039C-A	POR1	P04840	283 aa	Known RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	GPA2	P10823	449 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	NSP1	P14907	823 aa	Known RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	MGT1	P26188	188 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	BUB2	P26448	306 aa	Predicted RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	ARO7	P32178	256 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	LHP1	P33399	275 aa	Known RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	SFK1	P35735	353 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	YER134C	P40081	178 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	PEP8	P40335	379 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	GLC8	P41818	229 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	ERJ5	P43613	295 aa	Predicted RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	YFR054C	P43622	192 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	SAE3	P89114	91 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	MAK3	Q03503	176 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	FMN1	Q03778	218 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	PKR1	Q03880	122 aa	Known RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	SDH7	Q04401	133 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	NAT3	Q06504	195 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	PRP11	Q07350	266 aa	Predicted RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	YOL014W	Q08110	124 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	YLR046C	Q12253	270 aa		1.81	□□□□□ -2.12
VMA10	YHR039C-A	PST2	Q12335	198 aa	Known RBP	1.81	□□□□□ -2.12
VMA10	YHR039C-A	TY1B-DR4	Q07793	1604 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YLR236C	A0A023PZG4	107 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YAR023C	D6VPM8	179 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	CMD1	P06787	147 aa	Known RBP	1.8	□□□□□ -2.12
VMA10	YHR039C-A	RPS1B	P23248	255 aa	Known RBP	1.8	□□□□□ -2.12
VMA10	YHR039C-A	UGX2	P32772	223 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YBR209W	P38311	105 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	NVJ1	P38881	321 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	VTC1	P40046	129 aa	RIP-Chip data	1.8	□□□□□ -2.12	not detected
VMA10	YHR039C-A	LSM4	P40070	187 aa	Known RBP	1.8	□□□□□ -2.12
VMA10	YHR039C-A	RFC2	P40348	353 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YJR015W	P47090	510 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	PAC10	P48363	199 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	BUD25	P85052	153 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	RAV2	Q03956	351 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YDR391C	Q04170	232 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YMR253C	Q04835	414 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YOR214C	Q12282	236 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	MPD1	Q12404	318 aa	Known RBP	1.8	□□□□□ -2.12
VMA10	YHR039C-A	PEX11	Q12462	236 aa		1.8	□□□□□ -2.12
VMA10	YHR039C-A	YGL041W-A	P0C5N3	154 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	PHO13	P19881	312 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	SPO13	P23624	291 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	MRP49	P32388	137 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	HYM1	P32464	399 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	YBR220C	P38318	560 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	AVT2	P39981	480 aa		1.79	□□□□□ -2.12
VMA10	YHR039C-A	POP3	P53833	195 aa	Predicted RBP	1.79	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 156.4 ms