RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W INP1Q03694 420 aa5.11□□□□□ -1.59
SKN1YGR143W YOL024WQ08172 172 aa5.11□□□□□ -1.59
SKN1YGR143W YOL073CQ08232 322 aa5.11□□□□□ -1.59
SKN1YGR143W HTA1P04911 132 aaKnown RBP5.11□□□□□ -1.59
SKN1YGR143W PHO85P17157 305 aa5.11□□□□□ -1.59
SKN1YGR143W ERG8P24521 451 aa5.11□□□□□ -1.59
SKN1YGR143W REC104P33323 182 aa5.11□□□□□ -1.59
SKN1YGR143W ATX1P38636 73 aa5.11□□□□□ -1.59
SKN1YGR143W YDL186WP48568 277 aa5.11□□□□□ -1.59
SKN1YGR143W UBP8P50102 471 aa5.11□□□□□ -1.59
SKN1YGR143W SBH1P52870 82 aa5.11□□□□□ -1.59
SKN1YGR143W YGL262WP53054 175 aa5.11□□□□□ -1.59
SKN1YGR143W YNL165WP53891 406 aa5.11□□□□□ -1.59
SKN1YGR143W ADD37Q03233 198 aa5.11□□□□□ -1.59
SKN1YGR143W TRI1Q05024 226 aa5.11□□□□□ -1.59
SKN1YGR143W RXT3Q07458 294 aa5.11□□□□□ -1.59
SKN1YGR143W YLR012CQ07927 99 aa5.11□□□□□ -1.59
SKN1YGR143W YLR042CQ07990 161 aa5.11□□□□□ -1.59
SKN1YGR143W UTP23Q12339 254 aaKnown RBP5.11□□□□□ -1.59
SKN1YGR143W JID1Q12350 301 aa5.11□□□□□ -1.59
SKN1YGR143W YKL018C-AQ3E7A7 99 aa5.11□□□□□ -1.59
SKN1YGR143W YCR099CP25657 155 aa5.1□□□□□ -1.59
SKN1YGR143W ATS1P31386 333 aa5.1□□□□□ -1.59
SKN1YGR143W NUD1P32336 851 aa5.1□□□□□ -1.59
SKN1YGR143W YEL028WP39989 153 aa5.1□□□□□ -1.59
SKN1YGR143W RPS10BP46784 105 aaKnown RBP5.1□□□□□ -1.59
SKN1YGR143W HMS2P47175 358 aa5.1□□□□□ -1.59
SKN1YGR143W TEX1P53851 422 aaKnown RBP5.1□□□□□ -1.59
SKN1YGR143W AIM11P87275 137 aa5.1□□□□□ -1.59
SKN1YGR143W YMR178WQ03219 274 aaKnown RBP5.1□□□□□ -1.59
SKN1YGR143W RAV2Q03956 351 aa5.1□□□□□ -1.59
SKN1YGR143W GRX8Q05926 109 aa5.1□□□□□ -1.59
SKN1YGR143W YFH1Q07540 174 aa5.1□□□□□ -1.59
SKN1YGR143W RPS10AQ08745 105 aaPredicted RBP5.1□□□□□ -1.59
SKN1YGR143W UBA3Q99344 299 aa5.1□□□□□ -1.59
SKN1YGR143W YCR007CP25354 239 aa5.09□□□□□ -1.59
SKN1YGR143W YCR100CP25606 316 aa5.09□□□□□ -1.59
SKN1YGR143W VMA11P32842 164 aa5.09□□□□□ -1.59
SKN1YGR143W YKL102CP34249 101 aa5.09□□□□□ -1.59
SKN1YGR143W PAU16P35994 123 aa5.09□□□□□ -1.59
SKN1YGR143W SDS24P38314 527 aa5.09□□□□□ -1.59
SKN1YGR143W ERG13P54839 491 aaKnown RBP5.09□□□□□ -1.59
SKN1YGR143W PIR1Q03178 341 aa5.09□□□□□ -1.59
SKN1YGR143W HNT1Q04344 158 aaKnown RBP5.09□□□□□ -1.59
SKN1YGR143W RDL2Q08742 149 aaKnown RBP5.09□□□□□ -1.59
SKN1YGR143W POC4Q12245 148 aaPredicted RBP5.09□□□□□ -1.59
SKN1YGR143W YJU3P28321 313 aa5.09□□□□□ -1.59
SKN1YGR143W MPM1P40364 252 aa5.09□□□□□ -1.59
SKN1YGR143W DLS1P40366 167 aa5.09□□□□□ -1.59
SKN1YGR143W GZF3P42944 551 aaKnown RBP5.09□□□□□ -1.59
SKN1YGR143W LYS5P50113 272 aa5.09□□□□□ -1.59
SKN1YGR143W YMR082CQ04276 118 aa5.09□□□□□ -1.59
SKN1YGR143W YLR363W-AQ3E747 85 aa5.09□□□□□ -1.59
SKN1YGR143W POR1P04840 283 aaKnown RBP5.08□□□□□ -1.6
SKN1YGR143W SRP21P32342 167 aa5.08□□□□□ -1.6
SKN1YGR143W ELO1P39540 310 aa5.08□□□□□ -1.6
SKN1YGR143W APQ12P40532 138 aa5.08□□□□□ -1.6
SKN1YGR143W OST2P46964 130 aa5.08□□□□□ -1.6
SKN1YGR143W GON7P46984 123 aa5.08□□□□□ -1.6
SKN1YGR143W EMC4P53073 190 aa5.08□□□□□ -1.6
SKN1YGR143W TDA7P53882 636 aaPredicted RBP5.08□□□□□ -1.6
SKN1YGR143W MCA1Q08601 432 aa5.08□□□□□ -1.6
SKN1YGR143W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SKN1YGR143W YDR029WQ12111 104 aa5.08□□□□□ -1.6
SKN1YGR143W OPI3P05375 206 aa5.08□□□□□ -1.6
SKN1YGR143W RAD6P06104 172 aa5.08□□□□□ -1.6
SKN1YGR143W YAR066WP0CX18 203 aa5.08□□□□□ -1.6
SKN1YGR143W YHR214WP0CX19 203 aa5.08□□□□□ -1.6
SKN1YGR143W PCL2P25693 308 aa5.08□□□□□ -1.6
SKN1YGR143W MLF3P32047 452 aa5.08□□□□□ -1.6
SKN1YGR143W UBX6P47049 396 aa5.08□□□□□ -1.6
SKN1YGR143W HPF1Q05164 967 aa5.08□□□□□ -1.6
SKN1YGR143W DGA1Q08650 418 aa5.08□□□□□ -1.6
SKN1YGR143W PRP46Q12417 451 aaPredicted RBP5.08□□□□□ -1.6
SKN1YGR143W IZH2Q12442 317 aa5.08□□□□□ -1.6
SKN1YGR143W PEX11Q12462 236 aa5.08□□□□□ -1.6
SKN1YGR143W COX5AP00424 153 aa5.07□□□□□ -1.6
SKN1YGR143W UMP1P38293 148 aa5.07□□□□□ -1.6
SKN1YGR143W CCS1P40202 249 aaKnown RBP5.07□□□□□ -1.6
SKN1YGR143W YJL213WP40896 331 aa5.07□□□□□ -1.6
SKN1YGR143W YFR045WP43617 309 aa5.07□□□□□ -1.6
SKN1YGR143W YJL028WP47062 111 aa5.07□□□□□ -1.6
SKN1YGR143W UTP15Q04305 513 aaKnown RBP5.07□□□□□ -1.6
SKN1YGR143W ENB1Q08299 606 aa5.07□□□□□ -1.6
SKN1YGR143W YPR015CQ12531 247 aa5.07□□□□□ -1.6
SKN1YGR143W PAD1P33751 242 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
SKN1YGR143W YER134CP40081 178 aa5.07□□□□□ -1.6
SKN1YGR143W PHS1P40857 217 aa5.07□□□□□ -1.6
SKN1YGR143W SCW4P53334 386 aaKnown RBP5.07□□□□□ -1.6
SKN1YGR143W YLR346CQ06139 101 aa5.07□□□□□ -1.6
SKN1YGR143W RRT7Q07829 113 aa5.07□□□□□ -1.6
SKN1YGR143W YPL162CQ12042 273 aa5.07□□□□□ -1.6
SKN1YGR143W YIL102C-AQ2V2P5 75 aa5.07□□□□□ -1.6
SKN1YGR143W SCS22Q6Q595 175 aa5.07□□□□□ -1.6
SKN1YGR143W YBR126W-AQ8TGU7 68 aa5.07□□□□□ -1.6
SKN1YGR143W MSI1P13712 422 aa5.06□□□□□ -1.6
SKN1YGR143W HSP10P38910 106 aa5.06□□□□□ -1.6
SKN1YGR143W GLE2P40066 365 aa5.06□□□□□ -1.6
SKN1YGR143W MMS2P53152 137 aa5.06□□□□□ -1.6
SKN1YGR143W CAB4P53332 305 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms