RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W POP5P28005 173 aa1.81□□□□□ -2.12
USO1YDL058W SFK1P35735 353 aa1.81□□□□□ -2.12
USO1YDL058W YKL162CP36052 402 aa1.81□□□□□ -2.12
USO1YDL058W RPS14BP39516 138 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W DFG10P40526 253 aa1.81□□□□□ -2.12
USO1YDL058W SMM1P53720 384 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W GPI11Q06636 219 aa1.81□□□□□ -2.12
USO1YDL058W TEN1Q07921 160 aa1.81□□□□□ -2.12
USO1YDL058W IML1P47170 1584 aa1.81□□□□□ -2.12
USO1YDL058W ADE6P38972 1358 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W PHO2P07269 559 aa1.81□□□□□ -2.12
USO1YDL058W ALG14P38242 237 aa1.81□□□□□ -2.12
USO1YDL058W ASP1P38986 381 aaPredicted RBP1.81□□□□□ -2.12
USO1YDL058W MET30P39014 640 aa1.81□□□□□ -2.12
USO1YDL058W RPL13BP40212 199 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W GPI2P46961 280 aa1.81□□□□□ -2.12
USO1YDL058W BOL2P53082 120 aa1.81□□□□□ -2.12
USO1YDL058W YOL159CQ08300 171 aa1.81□□□□□ -2.12
USO1YDL058W YMR030W-AQ3E760 96 aa1.81□□□□□ -2.12
USO1YDL058W Q0255P03881 472 aa1.81□□□□□ -2.12
USO1YDL058W AAT2P23542 418 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W YCR085WP25650 117 aa1.81□□□□□ -2.12
USO1YDL058W ATG12P38316 186 aa1.81□□□□□ -2.12
USO1YDL058W YIL169CP40442 995 aa1.81□□□□□ -2.12
USO1YDL058W SIM1P40472 476 aa1.81□□□□□ -2.12
USO1YDL058W TES1P41903 349 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W YGL230CP53074 147 aa1.81□□□□□ -2.12
USO1YDL058W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
USO1YDL058W TOM40P23644 387 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W SIP2P34164 415 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W YBR241CP38142 488 aa1.8□□□□□ -2.12
USO1YDL058W ATG8P38182 117 aaRIP-Chip data1.8□□□□□ -2.12not detected
USO1YDL058W GEP4P38812 185 aa1.8□□□□□ -2.12
USO1YDL058W SDH1Q00711 640 aa1.8□□□□□ -2.12
USO1YDL058W ASM4Q05166 528 aa1.8□□□□□ -2.12
USO1YDL058W YDR029WQ12111 104 aa1.8□□□□□ -2.12
USO1YDL058W ERP3Q12403 225 aa1.8□□□□□ -2.12
USO1YDL058W RPL13AQ12690 199 aaPredicted RBP1.8□□□□□ -2.12
USO1YDL058W YAR023CD6VPM8 179 aa1.8□□□□□ -2.12
USO1YDL058W YHR214C-DP0CX93 97 aa1.8□□□□□ -2.12
USO1YDL058W DDR48P18899 430 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W RFA2P26754 273 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W YNL194CP40169 301 aa1.8□□□□□ -2.12
USO1YDL058W CCS1P40202 249 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W ECO1P43605 281 aa1.8□□□□□ -2.12
USO1YDL058W DAN1P47178 298 aa1.8□□□□□ -2.12
USO1YDL058W SCS3P53012 380 aa1.8□□□□□ -2.12
USO1YDL058W YPL034WQ03083 165 aa1.8□□□□□ -2.12
USO1YDL058W YHC1Q05900 231 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W MCP1Q12106 302 aa1.8□□□□□ -2.12
USO1YDL058W MRPL23Q12487 163 aaPredicted RBP1.8□□□□□ -2.12
USO1YDL058W RAD10P06838 210 aa1.8□□□□□ -2.12
USO1YDL058W GAS1P22146 559 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W SUI1P32911 108 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W YBR096WP38256 230 aa1.8□□□□□ -2.12
USO1YDL058W TOS2P50078 622 aa1.8□□□□□ -2.12
USO1YDL058W YGL262WP53054 175 aa1.8□□□□□ -2.12
USO1YDL058W SHH3Q04487 196 aa1.8□□□□□ -2.12
USO1YDL058W HMRA1P0CY11 126 aa1.8□□□□□ -2.12
USO1YDL058W COX10P21592 462 aa1.8□□□□□ -2.12
USO1YDL058W BUD23P25627 275 aaPredicted RBP1.8□□□□□ -2.12
USO1YDL058W QRI5P32344 111 aa1.8□□□□□ -2.12
USO1YDL058W KTR3P38130 404 aaPredicted RBP1.8□□□□□ -2.12
USO1YDL058W YHR177WP38867 453 aa1.8□□□□□ -2.12
USO1YDL058W YAR068WP39564 161 aa1.8□□□□□ -2.12
USO1YDL058W AST2P39945 430 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W YEA6P39953 335 aa1.8□□□□□ -2.12
USO1YDL058W POP1P41812 875 aa1.8□□□□□ -2.12
USO1YDL058W KNH1P50112 268 aa1.8□□□□□ -2.12
USO1YDL058W MTL1P53214 551 aa1.8□□□□□ -2.12
USO1YDL058W DAD4P69851 72 aa1.8□□□□□ -2.12
USO1YDL058W MZM1Q03429 123 aaPredicted RBP1.8□□□□□ -2.12
USO1YDL058W YML053CQ04978 212 aa1.8□□□□□ -2.12
USO1YDL058W TDA6Q06466 467 aa1.8□□□□□ -2.12
USO1YDL058W YDL242WQ07746 117 aa1.8□□□□□ -2.12
USO1YDL058W YLR419WQ06698 1435 aaKnown RBP1.8□□□□□ -2.12
USO1YDL058W PSK1P31374 1356 aa1.79□□□□□ -2.12
USO1YDL058W RPP1P38786 293 aa1.79□□□□□ -2.12
USO1YDL058W SNF11P38956 169 aa1.79□□□□□ -2.12
USO1YDL058W TVP23P38962 199 aa1.79□□□□□ -2.12
USO1YDL058W CWP2P43497 92 aa1.79□□□□□ -2.12
USO1YDL058W CTH1P47976 325 aa1.79□□□□□ -2.12
USO1YDL058W DOC1P53068 250 aa1.79□□□□□ -2.12
USO1YDL058W MOT3P54785 490 aaKnown RBP1.79□□□□□ -2.12
USO1YDL058W RIM9Q04734 239 aa1.79□□□□□ -2.12
USO1YDL058W GAL83Q04739 417 aa1.79□□□□□ -2.12
USO1YDL058W YMR254CQ04838 102 aa1.79□□□□□ -2.12
USO1YDL058W HPF1Q05164 967 aa1.79□□□□□ -2.12
USO1YDL058W YLR224WQ05947 369 aa1.79□□□□□ -2.12
USO1YDL058W PFA4Q12006 378 aa1.79□□□□□ -2.12
USO1YDL058W LYS2P07702 1392 aa1.79□□□□□ -2.12
USO1YDL058W MATALPHA1P0CY06 175 aa1.79□□□□□ -2.12
USO1YDL058W HMLALPHA1P0CY07 175 aa1.79□□□□□ -2.12
USO1YDL058W CBT1P36038 271 aaPredicted RBP1.79□□□□□ -2.12
USO1YDL058W UTP30P36144 274 aaKnown RBP1.79□□□□□ -2.12
USO1YDL058W YAR029WP39549 74 aa1.79□□□□□ -2.12
USO1YDL058W EDC2P40023 145 aaPredicted RBP1.79□□□□□ -2.12
USO1YDL058W YGR151CP53287 111 aa1.79□□□□□ -2.12
USO1YDL058W POP3P53833 195 aaPredicted RBP1.79□□□□□ -2.12
USO1YDL058W YCL001W-AP87012 153 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms