RNA–Protein interactions for RNA: YBR098W

MMS4, Transcript of Subunit of structure-specific Mms4p-Mus81p endonuclease, yeast

Gene MMS4, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MMS4	YBR098W	RME1	P32338	300 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	NVJ1	P38881	321 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	CUP9	P41817	306 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	MZM1	Q03429	123 aa	Predicted RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	GPI17	Q04080	534 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	GAL83	Q04739	417 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	MPD1	Q12404	318 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	RPL35A	P0CX84	120 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	RPL35B	P0CX85	120 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	SHG1	P38337	142 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	SEC72	P39742	193 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	YEL067C	P39978	195 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	YNL200C	P40165	246 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	HYR1	P40581	163 aa	Known RBP	0.52	□□□□□ -2.33
MMS4	YBR098W	YFL065C	P43539	102 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	JAC1	P53193	184 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	YOR342C	Q12182	319 aa		0.52	□□□□□ -2.33
MMS4	YBR098W	SEN2	P16658	377 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	STP22	P25604	385 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	RPB7	P34087	171 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	RRT1	P38192	103 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	NSG1	P38837	291 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	RFC2	P40348	353 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	MPM1	P40364	252 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	YLR460C	P54007	376 aa		0.51	□□□□□ -2.33
MMS4	YBR098W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.51	□□□□□ -2.33
MMS4	YBR098W	VAR1	P02381	398 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	GSP2	P32836	220 aa	Known RBP	0.5	□□□□□ -2.33
MMS4	YBR098W	FMP32	P43557	207 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	CWC27	Q02770	301 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	RCE1	Q03530	315 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	TRR1	P29509	319 aa	Known RBP	0.5	□□□□□ -2.33
MMS4	YBR098W	MAK5	P38112	773 aa	Predicted RBP	0.5	□□□□□ -2.33
MMS4	YBR098W	YHL042W	P38729	150 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	HPA3	P39979	161 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	YER121W	P40076	114 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	NSA2	P40078	261 aa	Known RBP	0.5	□□□□□ -2.33
MMS4	YBR098W	RIM9	Q04734	239 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	ELP6	Q04868	273 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	UPS1	Q05776	175 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	DAS2	Q12084	232 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	YOR015W	Q12169	119 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	PEX11	Q12462	236 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	YLR412C-A	Q3E742	68 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	COA3	Q3E7B2	85 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	YPR014C	Q6B0W2	109 aa		0.5	□□□□□ -2.33
MMS4	YBR098W	SRP14	P38985	146 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	ALB1	P47019	175 aa	Predicted RBP	0.49	□□□□□ -2.33
MMS4	YBR098W	TTI2	P47168	421 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	YGL235W	P53071	178 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	YNL140C	P53910	189 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	HSK3	P69852	69 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	PIR1	Q03178	341 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	YET3	Q07451	203 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	STF2	P16965	84 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	YCR023C	P25351	611 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	RAD51	P25454	400 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	SFK1	P35735	353 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	EGD2	P38879	174 aa	Known RBP	0.49	□□□□□ -2.33
MMS4	YBR098W	EDC3	P39998	551 aa	Known RBP	0.49	□□□□□ -2.33
MMS4	YBR098W	SOK1	P40317	901 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	HUA1	P40325	198 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	NSE4	P43124	402 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	TMA22	P47089	198 aa	Predicted RBP	0.49	□□□□□ -2.33
MMS4	YBR098W	MET31	Q03081	177 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	UPS3	Q04006	179 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	GIM5	Q04493	163 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	AVO2	Q04749	426 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	ATG41	Q12048	136 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	YOR381W-A	Q3E804	55 aa		0.49	□□□□□ -2.33
MMS4	YBR098W	SEC14	P24280	304 aa	Known RBP	0.48	□□□□□ -2.33
MMS4	YBR098W	ECM4	P36156	370 aa		0.48	□□□□□ -2.33
MMS4	YBR098W	RPL37A	P49166	88 aa	Known RBP	0.48	□□□□□ -2.33
MMS4	YBR098W	DML1	Q03652	475 aa		0.48	□□□□□ -2.33
MMS4	YBR098W	RRP17	Q04031	235 aa	Predicted RBP	0.48	□□□□□ -2.33
MMS4	YBR098W	YHP1	Q04116	353 aa		0.48	□□□□□ -2.33
MMS4	YBR098W	YPR127W	Q06494	345 aa		0.48	□□□□□ -2.33
MMS4	YBR098W	YOR214C	Q12282	236 aa		0.48	□□□□□ -2.33
MMS4	YBR098W	TAR1	Q8TGM6	124 aa		0.48	□□□□□ -2.33
MMS4	YBR098W	HSP30	P25619	332 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	ETR1	P38071	380 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	YKR005C	Q02203	525 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	THI74	Q04083	370 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	HPT1	Q04178	221 aa	Known RBP	0.47	□□□□□ -2.33
MMS4	YBR098W	SAC3	P46674	1301 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	YEL028W	P39989	153 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	CCS1	P40202	249 aa	Known RBP	0.47	□□□□□ -2.33
MMS4	YBR098W	GLR1	P41921	483 aa	Known RBP	0.47	□□□□□ -2.33
MMS4	YBR098W	VPS28	Q02767	242 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	YDR391C	Q04170	232 aa		0.47	□□□□□ -2.33
MMS4	YBR098W	YDL241W	Q07738	123 aa		0.46	□□□□□ -2.34
MMS4	YBR098W	YLR050C	Q12155	161 aa	Known RBP	0.46	□□□□□ -2.34
MMS4	YBR098W	HFA1	P32874	2273 aa		0.46	□□□□□ -2.34
MMS4	YBR098W	YHL037C	P38733	133 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	ORM1	P53224	222 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	TLG1	Q03322	224 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	YPR202W	Q08993	238 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	YBL010C	P32788	280 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	YEL073C	P39974	107 aa		0.45	□□□□□ -2.34
MMS4	YBR098W	SYM1	Q06563	197 aa		0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms