RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W YAL064W-BO13512 126 aa6.14□□□□□ -1.43
TOD6YBL054W MSI1P13712 422 aa6.14□□□□□ -1.43
TOD6YBL054W RPI1P23250 407 aaKnown RBP6.14□□□□□ -1.43
TOD6YBL054W SRP21P32342 167 aa6.14□□□□□ -1.43
TOD6YBL054W SWD3P38123 315 aa6.14□□□□□ -1.43
TOD6YBL054W DER1P38307 211 aa6.14□□□□□ -1.43
TOD6YBL054W YIL163CP40448 117 aa6.14□□□□□ -1.43
TOD6YBL054W YFH1Q07540 174 aa6.14□□□□□ -1.43
TOD6YBL054W CSM4Q08955 156 aa6.14□□□□□ -1.43
TOD6YBL054W YHR214C-EQ8TGK0 99 aa6.14□□□□□ -1.43
TOD6YBL054W ATG40Q99325 256 aa6.14□□□□□ -1.43
TOD6YBL054W MBF1O14467 151 aaKnown RBP6.14□□□□□ -1.43
TOD6YBL054W SEC11P15367 167 aa6.14□□□□□ -1.43
TOD6YBL054W NOP1P15646 327 aaKnown RBP6.14□□□□□ -1.43
TOD6YBL054W ARO2P28777 376 aaKnown RBP6.14□□□□□ -1.43
TOD6YBL054W YUH1P35127 236 aa6.14□□□□□ -1.43
TOD6YBL054W MSL1P40567 111 aaPredicted RBP6.14□□□□□ -1.43
TOD6YBL054W HAC1P41546 238 aa6.14□□□□□ -1.43
TOD6YBL054W MSY1P48527 492 aa6.14□□□□□ -1.43
TOD6YBL054W TAF4P50105 388 aa6.14□□□□□ -1.43
TOD6YBL054W YIP5P53108 310 aa6.14□□□□□ -1.43
TOD6YBL054W YGR017WP53210 297 aa6.14□□□□□ -1.43
TOD6YBL054W SSU72P53538 206 aaPredicted RBP6.14□□□□□ -1.43
TOD6YBL054W DIC1Q06143 298 aa6.14□□□□□ -1.43
TOD6YBL054W PRP11Q07350 266 aaPredicted RBP6.14□□□□□ -1.43
TOD6YBL054W YOL118CQ08259 102 aa6.14□□□□□ -1.43
TOD6YBL054W GEP5Q12393 293 aa6.14□□□□□ -1.43
TOD6YBL054W SLO1Q3E784 85 aa6.14□□□□□ -1.43
TOD6YBL054W YER190C-BP0CX94 160 aa6.13□□□□□ -1.43
TOD6YBL054W YEL077W-AP0CX95 160 aa6.13□□□□□ -1.43
TOD6YBL054W YGR296C-BP0CX96 160 aa6.13□□□□□ -1.43
TOD6YBL054W YPL283W-BP0CX97 160 aa6.13□□□□□ -1.43
TOD6YBL054W YPR204C-AP0CX98 160 aa6.13□□□□□ -1.43
TOD6YBL054W CUP2P15315 225 aa6.13□□□□□ -1.43
TOD6YBL054W ANB1P19211 157 aa6.13□□□□□ -1.43
TOD6YBL054W MRP49P32388 137 aa6.13□□□□□ -1.43
TOD6YBL054W PHD1P36093 366 aa6.13□□□□□ -1.43
TOD6YBL054W LPP1Q04396 274 aa6.13□□□□□ -1.43
TOD6YBL054W RDL2Q08742 149 aaKnown RBP6.13□□□□□ -1.43
TOD6YBL054W YOR292CQ08743 309 aa6.13□□□□□ -1.43
TOD6YBL054W SWT1Q12104 458 aa6.13□□□□□ -1.43
TOD6YBL054W YLR050CQ12155 161 aaKnown RBP6.13□□□□□ -1.43
TOD6YBL054W RKI1Q12189 258 aa6.13□□□□□ -1.43
TOD6YBL054W PRP46Q12417 451 aaPredicted RBP6.13□□□□□ -1.43
TOD6YBL054W YOR192C-CQ3E736 78 aa6.13□□□□□ -1.43
TOD6YBL054W PAI3P01094 68 aa6.12□□□□□ -1.43
TOD6YBL054W SEC4P07560 215 aaKnown RBP6.12□□□□□ -1.43
TOD6YBL054W RML2P32611 393 aa6.12□□□□□ -1.43
TOD6YBL054W PCL7P40186 285 aa6.12□□□□□ -1.43
TOD6YBL054W CCS1P40202 249 aaKnown RBP6.12□□□□□ -1.43
TOD6YBL054W YJR115WP47152 169 aa6.12□□□□□ -1.43
TOD6YBL054W TNA1P53322 534 aa6.12□□□□□ -1.43
TOD6YBL054W ADH6Q04894 360 aaKnown RBP6.12□□□□□ -1.43
TOD6YBL054W NIP7Q08962 181 aaKnown RBP6.12□□□□□ -1.43
TOD6YBL054W USB1Q12208 290 aaKnown RBP6.12□□□□□ -1.43
TOD6YBL054W SCS22Q6Q595 175 aa6.12□□□□□ -1.43
TOD6YBL054W LSM2P38203 95 aaKnown RBP6.11□□□□□ -1.43
TOD6YBL054W UBS1P38290 277 aa6.11□□□□□ -1.43
TOD6YBL054W FYV4P38783 130 aaPredicted RBP6.11□□□□□ -1.43
TOD6YBL054W DSK2P48510 373 aa6.11□□□□□ -1.43
TOD6YBL054W CPD1P53314 239 aa6.11□□□□□ -1.43
TOD6YBL054W FIT3Q08907 204 aa6.11□□□□□ -1.43
TOD6YBL054W POC4Q12245 148 aaPredicted RBP6.11□□□□□ -1.43
TOD6YBL054W RDL1Q12305 139 aaKnown RBP6.11□□□□□ -1.43
TOD6YBL054W YBR090CP38253 122 aa6.1□□□□□ -1.43
TOD6YBL054W PRM5P40476 318 aa6.1□□□□□ -1.43
TOD6YBL054W OYE3P41816 400 aaPredicted RBP6.1□□□□□ -1.43
TOD6YBL054W TDA4P47153 279 aa6.1□□□□□ -1.43
TOD6YBL054W YGL118CP53132 145 aa6.1□□□□□ -1.43
TOD6YBL054W YNR061CP53747 219 aa6.1□□□□□ -1.43
TOD6YBL054W YNR064CP53750 290 aa6.1□□□□□ -1.43
TOD6YBL054W GRH1Q04410 372 aaKnown RBP6.1□□□□□ -1.43
TOD6YBL054W RIM9Q04734 239 aa6.1□□□□□ -1.43
TOD6YBL054W HNT3Q08702 217 aa6.1□□□□□ -1.43
TOD6YBL054W YLR363W-AQ3E747 85 aa6.1□□□□□ -1.43
TOD6YBL054W CYR1P08678 2026 aaKnown RBP6.1□□□□□ -1.43
TOD6YBL054W HMRA1P0CY11 126 aa6.1□□□□□ -1.43
TOD6YBL054W RPS2P25443 254 aaKnown RBP6.1□□□□□ -1.43
TOD6YBL054W QRI5P32344 111 aa6.1□□□□□ -1.43
TOD6YBL054W ZRT1P32804 376 aa6.1□□□□□ -1.43
TOD6YBL054W YHL044WP38727 235 aa6.1□□□□□ -1.43
TOD6YBL054W SHO1P40073 367 aa6.1□□□□□ -1.43
TOD6YBL054W GPP2P40106 250 aaKnown RBP6.1□□□□□ -1.43
TOD6YBL054W SEC24P40482 926 aaKnown RBP6.1□□□□□ -1.43
TOD6YBL054W SNP1Q00916 300 aaPredicted RBP6.1□□□□□ -1.43
TOD6YBL054W YDR344CQ05510 147 aa6.1□□□□□ -1.43
TOD6YBL054W MRL1Q06815 381 aa6.1□□□□□ -1.43
TOD6YBL054W ATO3Q12359 275 aa6.1□□□□□ -1.43
TOD6YBL054W YKR070WP36151 352 aaKnown RBP6.09□□□□□ -1.43
TOD6YBL054W NTC20P38302 140 aaPredicted RBP6.09□□□□□ -1.43
TOD6YBL054W SEC72P39742 193 aaKnown RBP6.09□□□□□ -1.43
TOD6YBL054W ARP3P47117 449 aaKnown RBP6.09□□□□□ -1.43
TOD6YBL054W WSC2P53832 503 aa6.09□□□□□ -1.43
TOD6YBL054W BOR1P53838 576 aa6.09□□□□□ -1.43
TOD6YBL054W POM34Q12445 299 aa6.09□□□□□ -1.43
TOD6YBL054W YPT1P01123 206 aaKnown RBP6.08□□□□□ -1.44
TOD6YBL054W YJR015WP47090 510 aa6.08□□□□□ -1.44
TOD6YBL054W ABM1P47146 123 aa6.08□□□□□ -1.44
TOD6YBL054W YMR210WQ03649 449 aa6.08□□□□□ -1.44
TOD6YBL054W TRS23Q03784 219 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms