RNA–Protein interactions for RNA: ENST00000636803.1

AMT-238, Transcript of aminomethyltransferase, human

TSL 5

Gene AMT, Length 1,945 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-238	ENST00000636803	NOVA2	Q9UNW9	492 aa	Known RBP	18.36	■□□□□ 0.53
AMT-238	ENST00000636803	SCN4A	P35499	1836 aa		18.36	■□□□□ 0.53
AMT-238	ENST00000636803	LACTBL1	A8MY62	500 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PDHX	O00330	501 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	GJB6	O95452	261 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PAEP	P09466	180 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	STAG3L1	P0CL83	205 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PPP2R2A	P63151	447 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	CAV1	Q03135	178 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	GJC2	Q5T442	439 aa	Predicted RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	ERICH1	Q86X53	443 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	TMEM192	Q8IY95	271 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	RBM41	Q96IZ5	413 aa	Known RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	TSPYL1	Q9H0U9	437 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	EPN3	Q9H201	632 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	SEMA4A	Q9H3S1	761 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	ASIC3	Q9UHC3	531 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	POLI	Q9UNA4	740 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803		A0A087WZ62	844 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	SHBG	P04278	402 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	TMOD1	P28289	359 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	LACTB	P83111	547 aa	Predicted RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PIGH	Q14442	188 aa	Predicted RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	SLC29A2	Q14542	456 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PTGIS	Q16647	500 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	ODF2	Q5BJF6	829 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	DCUN1D2	Q6PH85	259 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	RHBDF2	Q6PJF5	856 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	NIPA2	Q8N8Q9	360 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	C3orf20	Q8ND61	904 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	AFG1L	Q8WV93	481 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PGM2	Q96G03	612 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	FDXACB1	Q9BRP7	624 aa	Predicted RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	HEMGN	Q9BXL5	484 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	KATNBL1	Q9H079	304 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	PDZD7	Q9H5P4	517 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	ASB7	Q9H672	318 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	MORF4L1	Q9UBU8	362 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	NXF1	Q9UBU9	619 aa	Known RBP	18.35	■□□□□ 0.53
AMT-238	ENST00000636803	SLC12A6	Q9UHW9	1150 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	STRIP2	Q9ULQ0	834 aa		18.35	■□□□□ 0.53
AMT-238	ENST00000636803	GLTPD2	A6NH11	291 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	NFIC	P08651	508 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	KRT19	P08727	400 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	IVD	P26440	423 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	ATIC	P31939	592 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	GCLC	P48506	637 aa	Predicted RBP	18.34	■□□□□ 0.53
AMT-238	ENST00000636803	COPS2	P61201	443 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	MAGOH	P61326	146 aa	Known RBP	18.34	■□□□□ 0.53
AMT-238	ENST00000636803	ZNF252P-AS1	Q0IIN9	211 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	BYSL	Q13895	437 aa	Known RBP	18.34	■□□□□ 0.53
AMT-238	ENST00000636803	C1orf127	Q8N9H9	656 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	MCEE	Q96PE7	176 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	C16orf70	Q9BSU1	422 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	AKT3	Q9Y243	479 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	NEU2	Q9Y3R4	380 aa		18.34	■□□□□ 0.53
AMT-238	ENST00000636803	IQCA1L	A6NCM1	817 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	TP73	O15350	636 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	RIPK2	O43353	540 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	POLR2B	P30876	1174 aa	Known RBP	18.33	■□□□□ 0.53
AMT-238	ENST00000636803	GTF2A2	P52657	109 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	ADCY2	Q08462	1091 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	NFX1	Q12986	1120 aa	Known RBP	18.33	■□□□□ 0.53
AMT-238	ENST00000636803	JADE1	Q6IE81	842 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	DENND1B	Q6P3S1	775 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	SRL	Q86TD4	932 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	MS4A4A	Q96JQ5	239 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	SCLT1	Q96NL6	688 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	VRTN	Q9H8Y1	702 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	IVNS1ABP	Q9Y6Y0	642 aa		18.33	■□□□□ 0.53
AMT-238	ENST00000636803	BTBD19	C9JJ37	291 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	CAND2	O75155	1236 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	ATF2	P15336	505 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	PTPN7	P35236	360 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	GJC1	P36383	396 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	CCT5	P48643	541 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	LMNB2	Q03252	620 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	C6orf118	Q5T5N4	469 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	MTHFD1L	Q6UB35	978 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	PNMA8A	Q86V59	439 aa	Predicted RBP	18.33	■□□□□ 0.52
AMT-238	ENST00000636803	BBOF1	Q8ND07	529 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	CXorf38	Q8TB03	319 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	CCDC114	Q96M63	670 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	SLITRK1	Q96PX8	696 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	CNOT10	Q9H9A5	744 aa	Known RBP	18.33	■□□□□ 0.52
AMT-238	ENST00000636803	CYP3A43	Q9HB55	503 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	LRRC4C	Q9HCJ2	640 aa		18.33	■□□□□ 0.52
AMT-238	ENST00000636803	DDX56	Q9NY93	547 aa	Known RBP	18.33	■□□□□ 0.52
AMT-238	ENST00000636803	RRP15	Q9Y3B9	282 aa	Known RBP	18.33	■□□□□ 0.52
AMT-238	ENST00000636803	EBAG9	O00559	213 aa		18.32	■□□□□ 0.52
AMT-238	ENST00000636803	MEFV	O15553	781 aa	Predicted RBP	18.32	■□□□□ 0.52
AMT-238	ENST00000636803	SNAI1	O95863	264 aa	Predicted RBP	18.32	■□□□□ 0.52
AMT-238	ENST00000636803	CD19	P15391	556 aa		18.32	■□□□□ 0.52
AMT-238	ENST00000636803	ADCYAP1R1	P41586	468 aa		18.32	■□□□□ 0.52
AMT-238	ENST00000636803	CDR1	P51861	262 aa		18.32	■□□□□ 0.52
AMT-238	ENST00000636803	RAD23B	P54727	409 aa		18.32	■□□□□ 0.52
AMT-238	ENST00000636803	OGDH	Q02218	1023 aa		18.32	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms