RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB2	YPR175W	ARO8	P53090	500 aa	Known RBP	4.15	□□□□□ -1.74
DPB2	YPR175W	DPM1	P14020	267 aa	Known RBP	4.15	□□□□□ -1.75
DPB2	YPR175W	RPB3	P16370	318 aa	Known RBP	4.15	□□□□□ -1.75
DPB2	YPR175W	LSM4	P40070	187 aa	Known RBP	4.15	□□□□□ -1.75
DPB2	YPR175W	PEX12	Q04370	399 aa		4.15	□□□□□ -1.75
DPB2	YPR175W	ATP15	P21306	62 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	ATG22	P25568	528 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	AHC2	P25649	128 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	YIL059C	P40520	121 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	SPG3	Q04398	127 aa	Predicted RBP	4.14	□□□□□ -1.75
DPB2	YPR175W	MID2	P36027	376 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	SOL1	P50278	321 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	YDC1	Q02896	317 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	ECM11	Q04110	302 aa		4.14	□□□□□ -1.75
DPB2	YPR175W	RIO1	Q12196	484 aa	Known RBP	4.14	□□□□□ -1.75
DPB2	YPR175W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.14	□□□□□ -1.75
DPB2	YPR175W	SRB8	P25648	1427 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	BCK1	Q01389	1478 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	RPS24A	P0CX31	135 aa	Known RBP	4.13	□□□□□ -1.75
DPB2	YPR175W	RPS24B	P0CX32	135 aa	Known RBP	4.13	□□□□□ -1.75
DPB2	YPR175W	EDC3	P39998	551 aa	Known RBP	4.13	□□□□□ -1.75
DPB2	YPR175W	GLE2	P40066	365 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	PRM10	P42946	383 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
DPB2	YPR175W	FEX1	Q08913	375 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	FEX2	Q08991	375 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	RDI1	Q12434	202 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	YIL177C	P40434	1758 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	YJL225C	P40889	1758 aa		4.13	□□□□□ -1.75
DPB2	YPR175W	DER1	P38307	211 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	YER188W	P40103	239 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	RSM25	P40496	264 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	SAS5	Q99314	248 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	SNF4	P12904	322 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	KDX1	P36005	433 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	TIF34	P40217	347 aa	Known RBP	4.12	□□□□□ -1.75
DPB2	YPR175W	FMP32	P43557	207 aa		4.12	□□□□□ -1.75
DPB2	YPR175W	FKS1	P38631	1876 aa	Known RBP	4.12	□□□□□ -1.75
DPB2	YPR175W	SKI6	P46948	246 aa	Predicted RBP	4.11	□□□□□ -1.75
DPB2	YPR175W	AIM34	Q03673	198 aa		4.11	□□□□□ -1.75
DPB2	YPR175W	ARR2	Q06597	130 aa		4.11	□□□□□ -1.75
DPB2	YPR175W	NSL1	Q12143	216 aa		4.11	□□□□□ -1.75
DPB2	YPR175W	PDR11	P40550	1411 aa		4.11	□□□□□ -1.75
DPB2	YPR175W	PDR5	P33302	1511 aa	Known RBP	4.1	□□□□□ -1.75
DPB2	YPR175W	YCR023C	P25351	611 aa		4.1	□□□□□ -1.75
DPB2	YPR175W	SHH4	Q06236	168 aa		4.1	□□□□□ -1.75
DPB2	YPR175W	PET20	Q99373	253 aa		4.1	□□□□□ -1.75
DPB2	YPR175W	YRF1-2	P40105	1681 aa		4.1	□□□□□ -1.75
DPB2	YPR175W	GPI17	Q04080	534 aa		4.1	□□□□□ -1.75
DPB2	YPR175W	AKR2	Q12013	749 aa		4.1	□□□□□ -1.75
DPB2	YPR175W	CDC8	P00572	216 aa		4.09	□□□□□ -1.75
DPB2	YPR175W	BET1	P22804	142 aa		4.09	□□□□□ -1.75
DPB2	YPR175W	UBC8	P28263	218 aa		4.09	□□□□□ -1.75
DPB2	YPR175W	YKL102C	P34249	101 aa		4.09	□□□□□ -1.75
DPB2	YPR175W	YDL012C	Q12489	107 aa		4.09	□□□□□ -1.75
DPB2	YPR175W	KRE1	P17260	313 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	CCA1	P21269	546 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	OCH1	P31755	480 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	MED6	P38782	295 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	PGA1	P53896	198 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	DGA1	Q08650	418 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	PEX11	Q12462	236 aa		4.09	□□□□□ -1.76
DPB2	YPR175W	YFH7	P43591	353 aa		4.08	□□□□□ -1.76
DPB2	YPR175W	SCO1	P23833	295 aa		4.07	□□□□□ -1.76
DPB2	YPR175W	MRPL17	P36528	281 aa		4.07	□□□□□ -1.76
DPB2	YPR175W	YJR146W	P47174	117 aa		4.07	□□□□□ -1.76
DPB2	YPR175W	KRE5	P22023	1365 aa		4.07	□□□□□ -1.76
DPB2	YPR175W	SLM6	P38343	150 aa		4.07	□□□□□ -1.76
DPB2	YPR175W	MPD1	Q12404	318 aa	Known RBP	4.07	□□□□□ -1.76
DPB2	YPR175W	GCN2	P15442	1659 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	TIM9	O74700	87 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	YKR032W	P36127	104 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	YLR053C	Q12026	108 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	ADH3	P07246	375 aa	Known RBP	4.06	□□□□□ -1.76
DPB2	YPR175W	MRPS28	P21771	286 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	NQM1	P53228	333 aa	Predicted RBP	4.06	□□□□□ -1.76
DPB2	YPR175W	HNT1	Q04344	158 aa	Known RBP	4.06	□□□□□ -1.76
DPB2	YPR175W	DYN3	Q04949	312 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	NAT3	Q06504	195 aa		4.06	□□□□□ -1.76
DPB2	YPR175W	URA5	P13298	226 aa	Known RBP	4.05	□□□□□ -1.76
DPB2	YPR175W	CKS1	P20486	150 aa	Known RBP	4.05	□□□□□ -1.76
DPB2	YPR175W	CSH1	P38287	376 aa		4.05	□□□□□ -1.76
DPB2	YPR175W	YIR035C	P40579	254 aa		4.05	□□□□□ -1.76
DPB2	YPR175W	SNX4	P47057	423 aa		4.05	□□□□□ -1.76
DPB2	YPR175W	HPT1	Q04178	221 aa	Known RBP	4.05	□□□□□ -1.76
DPB2	YPR175W	YPR127W	Q06494	345 aa		4.05	□□□□□ -1.76
DPB2	YPR175W	IES4	Q08561	116 aa		4.05	□□□□□ -1.76
DPB2	YPR175W	RRP5	Q05022	1729 aa	Known RBP	4.05	□□□□□ -1.76
DPB2	YPR175W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
DPB2	YPR175W	OPY1	P38271	328 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	MHT1	Q12525	324 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	RPS28B	P0C0X0	67 aa	Known RBP	4.04	□□□□□ -1.76
DPB2	YPR175W	YHR180W	P38868	163 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	AIF1	P52923	378 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	SUE1	Q06524	206 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	YLR031W	Q07978	186 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.04	□□□□□ -1.76
DPB2	YPR175W	NUP192	P47054	1683 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	FAB1	P34756	2278 aa		4.04	□□□□□ -1.76
DPB2	YPR175W	VMA11	P32842	164 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms