RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YJL225CP40889 1758 aa2.21□□□□□ -2.06
TRM112YNR046W DDI2P0CH63 225 aa2.2□□□□□ -2.06
TRM112YNR046W DDI3P0CH64 225 aa2.2□□□□□ -2.06
TRM112YNR046W MDH2P22133 377 aa2.2□□□□□ -2.06
TRM112YNR046W TRR1P29509 319 aaKnown RBP2.2□□□□□ -2.06
TRM112YNR046W OCH1P31755 480 aa2.2□□□□□ -2.06
TRM112YNR046W SHE2P36068 246 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
TRM112YNR046W YAP3P38749 330 aa2.2□□□□□ -2.06
TRM112YNR046W FCY21P40039 528 aa2.2□□□□□ -2.06
TRM112YNR046W CIN5P40917 295 aa2.2□□□□□ -2.06
TRM112YNR046W FMP32P43557 207 aa2.2□□□□□ -2.06
TRM112YNR046W SKI6P46948 246 aaPredicted RBP2.2□□□□□ -2.06
TRM112YNR046W BOL2P53082 120 aa2.2□□□□□ -2.06
TRM112YNR046W YGL204CP53089 101 aa2.2□□□□□ -2.06
TRM112YNR046W ARO8P53090 500 aaKnown RBP2.2□□□□□ -2.06
TRM112YNR046W DYN3Q04949 312 aa2.2□□□□□ -2.06
TRM112YNR046W YLR053CQ12026 108 aa2.2□□□□□ -2.06
TRM112YNR046W NSL1Q12143 216 aa2.2□□□□□ -2.06
TRM112YNR046W ODC2Q99297 307 aa2.2□□□□□ -2.06
TRM112YNR046W RAS2P01120 322 aaKnown RBP2.19□□□□□ -2.06
TRM112YNR046W GCY1P14065 312 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
TRM112YNR046W MGT1P26188 188 aa2.19□□□□□ -2.06
TRM112YNR046W CLG1P35190 452 aa2.19□□□□□ -2.06
TRM112YNR046W YBR209WP38311 105 aa2.19□□□□□ -2.06
TRM112YNR046W YEA4P40004 342 aa2.19□□□□□ -2.06
TRM112YNR046W PEP8P40335 379 aa2.19□□□□□ -2.06
TRM112YNR046W SER2P42941 309 aa2.19□□□□□ -2.06
TRM112YNR046W SBH2P52871 88 aa2.19□□□□□ -2.06
TRM112YNR046W JAC1P53193 184 aa2.19□□□□□ -2.06
TRM112YNR046W YPD1Q07688 167 aa2.19□□□□□ -2.06
TRM112YNR046W YHR086W-AQ3E746 53 aa2.19□□□□□ -2.06
TRM112YNR046W CPA1P07258 411 aaKnown RBP2.18□□□□□ -2.06
TRM112YNR046W CYC2P38909 366 aa2.18□□□□□ -2.06
TRM112YNR046W YER134CP40081 178 aa2.18□□□□□ -2.06
TRM112YNR046W AYR1P40471 297 aa2.18□□□□□ -2.06
TRM112YNR046W PHB1P40961 287 aa2.18□□□□□ -2.06
TRM112YNR046W APS3P47064 194 aa2.18□□□□□ -2.06
TRM112YNR046W MOG1P47123 218 aa2.18□□□□□ -2.06
TRM112YNR046W YGL235WP53071 178 aa2.18□□□□□ -2.06
TRM112YNR046W NQM1P53228 333 aaPredicted RBP2.18□□□□□ -2.06
TRM112YNR046W SAY1P53324 424 aa2.18□□□□□ -2.06
TRM112YNR046W RCF2P53721 224 aa2.18□□□□□ -2.06
TRM112YNR046W YNR077CP53758 84 aa2.18□□□□□ -2.06
TRM112YNR046W BUD25P85052 153 aa2.18□□□□□ -2.06
TRM112YNR046W NUP49Q02199 472 aa2.18□□□□□ -2.06
TRM112YNR046W AIM34Q03673 198 aa2.18□□□□□ -2.06
TRM112YNR046W YPR014CQ6B0W2 109 aa2.18□□□□□ -2.06
TRM112YNR046W ATG40Q99325 256 aa2.18□□□□□ -2.06
TRM112YNR046W UBC8P28263 218 aa2.17□□□□□ -2.06
TRM112YNR046W FZF1P32805 299 aa2.17□□□□□ -2.06
TRM112YNR046W PAN3P36102 679 aaPredicted RBP2.17□□□□□ -2.06
TRM112YNR046W OPY1P38271 328 aa2.17□□□□□ -2.06
TRM112YNR046W AVT2P39981 480 aa2.17□□□□□ -2.06
TRM112YNR046W EDC3P39998 551 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W YER137CP40083 148 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W YJR111CP47148 283 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W TDA4P47153 279 aa2.17□□□□□ -2.06
TRM112YNR046W YMR315WQ04869 349 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W MET5P47169 1442 aa2.17□□□□□ -2.06
TRM112YNR046W RAD50P12753 1312 aa2.17□□□□□ -2.06
TRM112YNR046W RPS28BP0C0X0 67 aaKnown RBP2.16□□□□□ -2.06
TRM112YNR046W AHC2P25649 128 aa2.16□□□□□ -2.06
TRM112YNR046W TFC1P32367 649 aa2.16□□□□□ -2.06
TRM112YNR046W CPR5P35176 225 aa2.16□□□□□ -2.06
TRM112YNR046W UPS2P35200 230 aa2.16□□□□□ -2.06
TRM112YNR046W SML1Q04964 104 aa2.16□□□□□ -2.06
TRM112YNR046W RFU1Q08003 200 aa2.16□□□□□ -2.06
TRM112YNR046W YOL014WQ08110 124 aa2.16□□□□□ -2.06
TRM112YNR046W RPS28AQ3E7X9 67 aaPredicted RBP2.16□□□□□ -2.06
TRM112YNR046W YML100W-AQ8TGT0 57 aa2.16□□□□□ -2.06
TRM112YNR046W PET54P10834 293 aa2.15□□□□□ -2.07
TRM112YNR046W SEC14P24280 304 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W YKR041WP36134 250 aa2.15□□□□□ -2.07
TRM112YNR046W GAA1P39012 614 aa2.15□□□□□ -2.07
TRM112YNR046W LSM4P40070 187 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W YGR201CP42936 225 aa2.15□□□□□ -2.07
TRM112YNR046W YFH7P43591 353 aa2.15□□□□□ -2.07
TRM112YNR046W ALB1P47019 175 aaPredicted RBP2.15□□□□□ -2.07
TRM112YNR046W PGA1P53896 198 aa2.15□□□□□ -2.07
TRM112YNR046W SHH4Q06236 168 aa2.15□□□□□ -2.07
TRM112YNR046W YLR050CQ12155 161 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W MPD1Q12404 318 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W PDR18P53756 1333 aa2.15□□□□□ -2.07
TRM112YNR046W RPO41P13433 1351 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W YLR236CA0A023PZG4 107 aa2.14□□□□□ -2.07
TRM112YNR046W YAR023CD6VPM8 179 aa2.14□□□□□ -2.07
TRM112YNR046W POR1P04840 283 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W NHP6AP11632 93 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W UTP11P34247 250 aaPredicted RBP2.14□□□□□ -2.07
TRM112YNR046W YMR295CQ03559 197 aa2.14□□□□□ -2.07
TRM112YNR046W HPT1Q04178 221 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W CUE4Q04201 117 aaPredicted RBP2.14□□□□□ -2.07
TRM112YNR046W YPR127WQ06494 345 aa2.14□□□□□ -2.07
TRM112YNR046W RDI1Q12434 202 aa2.14□□□□□ -2.07
TRM112YNR046W TAF2P23255 1407 aa2.14□□□□□ -2.07
TRM112YNR046W IDP1P21954 428 aaKnown RBP2.13□□□□□ -2.07
TRM112YNR046W NVJ1P38881 321 aa2.13□□□□□ -2.07
TRM112YNR046W YER076CP40049 302 aa2.13□□□□□ -2.07
TRM112YNR046W TMA20P89886 181 aaPredicted RBP2.13□□□□□ -2.07
TRM112YNR046W DYN2Q02647 92 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms