RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C PCL1P24867 279 aa2.33□□□□□ -2.04
ATG3YNR007C DOA4P32571 926 aa2.33□□□□□ -2.04
ATG3YNR007C RAD23P32628 398 aaKnown RBP2.33□□□□□ -2.04
ATG3YNR007C MID2P36027 376 aa2.33□□□□□ -2.04
ATG3YNR007C FMP23P38231 175 aa2.33□□□□□ -2.04
ATG3YNR007C POP2P39008 433 aa2.33□□□□□ -2.04
ATG3YNR007C SOP4P39543 234 aaPredicted RBP2.33□□□□□ -2.04
ATG3YNR007C RMD6P39975 231 aa2.33□□□□□ -2.04
ATG3YNR007C YRB2P40517 327 aa2.33□□□□□ -2.04
ATG3YNR007C TTI2P47168 421 aa2.33□□□□□ -2.04
ATG3YNR007C NSA1P53136 463 aaPredicted RBP2.33□□□□□ -2.04
ATG3YNR007C SPO19Q03029 223 aa2.33□□□□□ -2.04
ATG3YNR007C FSH2Q05015 223 aa2.33□□□□□ -2.04
ATG3YNR007C MSA1Q08471 629 aa2.33□□□□□ -2.04
ATG3YNR007C DGK1Q12382 290 aa2.33□□□□□ -2.04
ATG3YNR007C TRM10Q12400 293 aa2.33□□□□□ -2.04
ATG3YNR007C MED11Q99278 115 aa2.33□□□□□ -2.04
ATG3YNR007C ATG40Q99325 256 aa2.33□□□□□ -2.04
ATG3YNR007C CDC28P00546 298 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C REP2P03872 296 aa2.32□□□□□ -2.04
ATG3YNR007C ADK1P07170 222 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C GRX2P17695 143 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C TOM40P23644 387 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C PET18P25362 215 aa2.32□□□□□ -2.04
ATG3YNR007C VMA6P32366 345 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C CPR5P35176 225 aa2.32□□□□□ -2.04
ATG3YNR007C AST1P35183 429 aa2.32□□□□□ -2.04
ATG3YNR007C SFK1P35735 353 aa2.32□□□□□ -2.04
ATG3YNR007C CBT1P36038 271 aaPredicted RBP2.32□□□□□ -2.04
ATG3YNR007C SHE2P36068 246 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
ATG3YNR007C ECM4P36156 370 aa2.32□□□□□ -2.04
ATG3YNR007C PAU24P38155 120 aa2.32□□□□□ -2.04
ATG3YNR007C SHE1P38200 338 aa2.32□□□□□ -2.04
ATG3YNR007C FIG1P38224 298 aa2.32□□□□□ -2.04
ATG3YNR007C NVJ1P38881 321 aa2.32□□□□□ -2.04
ATG3YNR007C CCS1P40202 249 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C RFC2P40348 353 aa2.32□□□□□ -2.04
ATG3YNR007C SLM1P40485 686 aa2.32□□□□□ -2.04
ATG3YNR007C FMC1P40491 155 aa2.32□□□□□ -2.04
ATG3YNR007C SYS1P41544 203 aa2.32□□□□□ -2.04
ATG3YNR007C IGD1P43598 195 aa2.32□□□□□ -2.04
ATG3YNR007C BNA6P43619 295 aa2.32□□□□□ -2.04
ATG3YNR007C YGL159WP53110 370 aa2.32□□□□□ -2.04
ATG3YNR007C SAY1P53324 424 aa2.32□□□□□ -2.04
ATG3YNR007C CTF19Q02732 369 aa2.32□□□□□ -2.04
ATG3YNR007C HNT1Q04344 158 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C YLR173WQ06247 608 aa2.32□□□□□ -2.04
ATG3YNR007C ATG17Q06410 417 aa2.32□□□□□ -2.04
ATG3YNR007C NOC4Q06512 552 aaPredicted RBP2.32□□□□□ -2.04
ATG3YNR007C GPN3Q06543 272 aa2.32□□□□□ -2.04
ATG3YNR007C YOR186WQ08560 144 aa2.32□□□□□ -2.04
ATG3YNR007C ATP16Q12165 160 aa2.32□□□□□ -2.04
ATG3YNR007C BPH1P25356 2167 aa2.32□□□□□ -2.04
ATG3YNR007C URA2P07259 2214 aaKnown RBP2.32□□□□□ -2.04
ATG3YNR007C PRE7P23724 241 aaKnown RBP2.31□□□□□ -2.04
ATG3YNR007C ACB1P31787 87 aa2.31□□□□□ -2.04
ATG3YNR007C PAU2P32612 120 aa2.31□□□□□ -2.04
ATG3YNR007C EGD2P38879 174 aaKnown RBP2.31□□□□□ -2.04
ATG3YNR007C PEX22P39718 180 aa2.31□□□□□ -2.04
ATG3YNR007C SSO2P39926 295 aa2.31□□□□□ -2.04
ATG3YNR007C AVT6P40074 448 aa2.31□□□□□ -2.04
ATG3YNR007C GON7P46984 123 aa2.31□□□□□ -2.04
ATG3YNR007C ERG25P53045 309 aa2.31□□□□□ -2.04
ATG3YNR007C YPS5P53057 165 aa2.31□□□□□ -2.04
ATG3YNR007C CAB4P53332 305 aa2.31□□□□□ -2.04
ATG3YNR007C SPG4Q04438 115 aa2.31□□□□□ -2.04
ATG3YNR007C YPD1Q07688 167 aa2.31□□□□□ -2.04
ATG3YNR007C YOL029CQ08187 201 aa2.31□□□□□ -2.04
ATG3YNR007C YPL225WQ08971 146 aaKnown RBP2.31□□□□□ -2.04
ATG3YNR007C KIN28P06242 306 aa2.3□□□□□ -2.04
ATG3YNR007C FUS3P16892 353 aaKnown RBP2.3□□□□□ -2.04
ATG3YNR007C IFM1P25038 676 aa2.3□□□□□ -2.04
ATG3YNR007C VMA5P31412 392 aaKnown RBP2.3□□□□□ -2.04
ATG3YNR007C ERG2P32352 222 aa2.3□□□□□ -2.04
ATG3YNR007C HYM1P32464 399 aa2.3□□□□□ -2.04
ATG3YNR007C PRS4P38063 326 aaPredicted RBP2.3□□□□□ -2.04
ATG3YNR007C UMP1P38293 148 aa2.3□□□□□ -2.04
ATG3YNR007C YBR285WP38354 144 aa2.3□□□□□ -2.04
ATG3YNR007C RTC3P38804 111 aaPredicted RBP2.3□□□□□ -2.04
ATG3YNR007C CTR2P38865 189 aa2.3□□□□□ -2.04
ATG3YNR007C PDS1P40316 373 aaPredicted RBP2.3□□□□□ -2.04
ATG3YNR007C PRM3Q08931 133 aa2.3□□□□□ -2.04
ATG3YNR007C ATG22P25568 528 aa2.29□□□□□ -2.04
ATG3YNR007C IMP1P28627 190 aa2.29□□□□□ -2.04
ATG3YNR007C PEX4P29340 183 aa2.29□□□□□ -2.04
ATG3YNR007C RIB7P33312 244 aa2.29□□□□□ -2.04
ATG3YNR007C YUH1P35127 236 aa2.29□□□□□ -2.04
ATG3YNR007C FCY21P40039 528 aa2.29□□□□□ -2.04
ATG3YNR007C AIM20P40451 204 aa2.29□□□□□ -2.04
ATG3YNR007C PIR5P46999 287 aa2.29□□□□□ -2.04
ATG3YNR007C YJR056CP47115 236 aa2.29□□□□□ -2.04
ATG3YNR007C YAE1P47118 141 aaPredicted RBP2.29□□□□□ -2.04
ATG3YNR007C SOL1P50278 321 aa2.29□□□□□ -2.04
ATG3YNR007C ASI3P53983 676 aa2.29□□□□□ -2.04
ATG3YNR007C TMA20P89886 181 aaPredicted RBP2.29□□□□□ -2.04
ATG3YNR007C MRPS16Q02608 121 aa2.29□□□□□ -2.04
ATG3YNR007C RPL21AQ02753 160 aaKnown RBP2.29□□□□□ -2.04
ATG3YNR007C YLR283WQ05867 314 aa2.29□□□□□ -2.04
ATG3YNR007C RFM1Q12192 310 aa2.29□□□□□ -2.04
ATG3YNR007C RPL21BQ12672 160 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms