RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	UBA3	Q99344	299 aa		4.4	□□□□□ -1.71
CSL4	YNL232W	QCR7	P00128	127 aa		4.39	□□□□□ -1.71
CSL4	YNL232W	PMR1	P13586	950 aa		4.39	□□□□□ -1.71
CSL4	YNL232W	NRG2	P38082	220 aa		4.39	□□□□□ -1.71
CSL4	YNL232W	YHR122W	P38829	231 aa		4.39	□□□□□ -1.71
CSL4	YNL232W	CWC23	P52868	283 aa	Predicted RBP	4.39	□□□□□ -1.71
CSL4	YNL232W	PKP2	P53170	491 aa		4.39	□□□□□ -1.71
CSL4	YNL232W	YIP3	P53633	176 aa		4.39	□□□□□ -1.71
CSL4	YNL232W	HTB1	P02293	131 aa	Known RBP	4.38	□□□□□ -1.71
CSL4	YNL232W	HTB2	P02294	131 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	YBR121C-A	P0C5L4	52 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	GRX2	P17695	143 aa	Known RBP	4.38	□□□□□ -1.71
CSL4	YNL232W	PEX4	P29340	183 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	MPC2	P38857	129 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	PHM8	P40025	321 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	ERG28	P40030	148 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	CCS1	P40202	249 aa	Known RBP	4.38	□□□□□ -1.71
CSL4	YNL232W	SWP82	P43554	623 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	NEJ1	Q06148	342 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	HEM25	Q07534	307 aa		4.38	□□□□□ -1.71
CSL4	YNL232W	DTD1	Q07648	150 aa	Known RBP	4.38	□□□□□ -1.71
CSL4	YNL232W	MRP1	P10662	321 aa	Known RBP	4.37	□□□□□ -1.71
CSL4	YNL232W	MRS4	P23500	304 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	SRL3	P36167	246 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	ECM33	P38248	429 aa	Known RBP	4.37	□□□□□ -1.71
CSL4	YNL232W	SRP14	P38985	146 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	AVT6	P40074	448 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	YKE4	P40544	346 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	IMD3	P50095	523 aa	Known RBP	4.37	□□□□□ -1.71
CSL4	YNL232W	SOL1	P50278	321 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	RPL9B	P51401	191 aa	Known RBP	4.37	□□□□□ -1.71
CSL4	YNL232W	ARR3	Q06598	404 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	PEX27	Q08580	376 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	YPL225W	Q08971	146 aa	Known RBP	4.37	□□□□□ -1.71
CSL4	YNL232W	TPT1	Q12272	230 aa	Known RBP	4.37	□□□□□ -1.71
CSL4	YNL232W	TFC7	Q12415	435 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	YOR192C-C	Q3E736	78 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	YKL183C-A	Q3E765	70 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	PET20	Q99373	253 aa		4.37	□□□□□ -1.71
CSL4	YNL232W	ADH2	P00331	348 aa	Known RBP	4.36	□□□□□ -1.71
CSL4	YNL232W	SWD3	P38123	315 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	SHE1	P38200	338 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	SDS24	P38314	527 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	MIC12	P38341	106 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	OCA2	P53949	197 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	TDA1	Q03533	586 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	SMP3	Q04174	516 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	FIT1	Q04433	528 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	PEX10	Q05568	337 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	PEX30	Q06169	523 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	NOC4	Q06512	552 aa	Predicted RBP	4.36	□□□□□ -1.71
CSL4	YNL232W	ORT1	Q12375	292 aa		4.36	□□□□□ -1.71
CSL4	YNL232W	RPL31B	P0C2H9	113 aa	Known RBP	4.35	□□□□□ -1.71
CSL4	YNL232W	YCR101C	P25607	182 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	RCN1	P36054	211 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	COX15	P40086	486 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	YNL194C	P40169	301 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	YIL024C	P40543	189 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	YGR210C	P42942	411 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	YFR035C	P43608	114 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	CRH1	P53301	507 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	CWC25	P53854	179 aa	Known RBP	4.35	□□□□□ -1.71
CSL4	YNL232W	YMR099C	Q03161	297 aa	Known RBP	4.35	□□□□□ -1.71
CSL4	YNL232W	YMD8	Q03697	442 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	RDS3	Q06835	107 aa	Predicted RBP	4.35	□□□□□ -1.71
CSL4	YNL232W	YOS1	Q3E834	85 aa		4.35	□□□□□ -1.71
CSL4	YNL232W	YGL041W-A	P0C5N3	154 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	RPL18A	P0CX49	186 aa	Known RBP	4.34	□□□□□ -1.71
CSL4	YNL232W	RPL18B	P0CX50	186 aa	Known RBP	4.34	□□□□□ -1.71
CSL4	YNL232W	NHP6A	P11632	93 aa	Known RBP	4.34	□□□□□ -1.71
CSL4	YNL232W	YMR31	P19955	123 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	SPS18	P32572	300 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	SNC2	P33328	115 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	YKR045C	P36138	183 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	DER1	P38307	211 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	YBR285W	P38354	144 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	BMT5	P40493	336 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	YMR181C	Q03231	154 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	NMA1	Q06178	401 aa	Known RBP	4.34	□□□□□ -1.71
CSL4	YNL232W	YPR1	Q12458	312 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	YBR255C-A	Q3E776	120 aa		4.34	□□□□□ -1.71
CSL4	YNL232W	TRR1	P29509	319 aa	Known RBP	4.33	□□□□□ -1.72
CSL4	YNL232W	HYM1	P32464	399 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	UMP1	P38293	148 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	SHG1	P38337	142 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	YHK8	P38776	514 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	UIP3	P39547	235 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	YJR012C	P47087	207 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	MOG1	P47123	218 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	ASR1	Q06834	288 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	POS5	Q06892	414 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	YOL118C	Q08259	102 aa		4.33	□□□□□ -1.72
CSL4	YNL232W	YLL053C	P0CD98	152 aa		4.32	□□□□□ -1.72
CSL4	YNL232W	ROX3	P25046	220 aa		4.32	□□□□□ -1.72
CSL4	YNL232W	BUD23	P25627	275 aa	Predicted RBP	4.32	□□□□□ -1.72
CSL4	YNL232W	RFA3	P26755	122 aa	Known RBP	4.32	□□□□□ -1.72
CSL4	YNL232W	IKI1	P38874	309 aa		4.32	□□□□□ -1.72
CSL4	YNL232W	GWT1	P47026	490 aa		4.32	□□□□□ -1.72
CSL4	YNL232W	COG5	P53951	403 aa		4.32	□□□□□ -1.72
CSL4	YNL232W	YML108W	Q03759	105 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms