RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C YER134CP40081 178 aa2.57□□□□□ -2
CTF18YMR078C YMR099CQ03161 297 aaKnown RBP2.57□□□□□ -2
CTF18YMR078C DYN3Q04949 312 aa2.57□□□□□ -2
CTF18YMR078C RAD28Q12021 506 aa2.57□□□□□ -2
CTF18YMR078C CYR1P08678 2026 aaKnown RBP2.57□□□□□ -2
CTF18YMR078C SEC11P15367 167 aa2.57□□□□□ -2
CTF18YMR078C YGL010WP25338 174 aa2.57□□□□□ -2
CTF18YMR078C YER034WP40022 185 aaKnown RBP2.57□□□□□ -2
CTF18YMR078C YMR315WQ04869 349 aaKnown RBP2.57□□□□□ -2
CTF18YMR078C YML100W-AQ8TGT0 57 aa2.57□□□□□ -2
CTF18YMR078C GCY1P14065 312 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
CTF18YMR078C TRX3P25372 127 aa2.56□□□□□ -2
CTF18YMR078C UPS2P35200 230 aa2.56□□□□□ -2
CTF18YMR078C YBR220CP38318 560 aa2.56□□□□□ -2
CTF18YMR078C AIM2P39721 246 aa2.56□□□□□ -2
CTF18YMR078C TDA4P47153 279 aa2.56□□□□□ -2
CTF18YMR078C CUE4Q04201 117 aaPredicted RBP2.56□□□□□ -2
CTF18YMR078C YLR036CQ07986 203 aa2.56□□□□□ -2
CTF18YMR078C YOL162WP0CF19 215 aa2.56□□□□□ -2
CTF18YMR078C RPL2AP0CX45 254 aaKnown RBP2.56□□□□□ -2
CTF18YMR078C RPL2BP0CX46 254 aaKnown RBP2.56□□□□□ -2
CTF18YMR078C BRX1Q08235 291 aaKnown RBP2.56□□□□□ -2
CTF18YMR078C YDL085C-AQ3E7B7 68 aaKnown RBP2.55□□□□□ -2
CTF18YMR078C POG1P40473 351 aa2.54□□□□□ -2
CTF18YMR078C YFL019CP43576 117 aa2.54□□□□□ -2
CTF18YMR078C FAS1P07149 2051 aaKnown RBP2.54□□□□□ -2
CTF18YMR078C SEC72P39742 193 aaKnown RBP2.53□□□□□ -2
CTF18YMR078C RPL13BP40212 199 aaKnown RBP2.53□□□□□ -2
CTF18YMR078C RPL13AQ12690 199 aaPredicted RBP2.53□□□□□ -2
CTF18YMR078C CLG1P35190 452 aa2.53□□□□□ -2
CTF18YMR078C TVP23P38962 199 aa2.53□□□□□ -2
CTF18YMR078C MTW1P39731 289 aa2.53□□□□□ -2
CTF18YMR078C YIP3P53633 176 aa2.53□□□□□ -2
CTF18YMR078C PGA1P53896 198 aa2.53□□□□□ -2
CTF18YMR078C PHO85P17157 305 aa2.52□□□□□ -2.01
CTF18YMR078C AIM34Q03673 198 aa2.52□□□□□ -2.01
CTF18YMR078C SAC3P46674 1301 aa2.52□□□□□ -2.01
CTF18YMR078C MGT1P26188 188 aa2.52□□□□□ -2.01
CTF18YMR078C JAC1P53193 184 aa2.52□□□□□ -2.01
CTF18YMR078C YET3Q07451 203 aa2.52□□□□□ -2.01
CTF18YMR078C TIR1P10863 254 aa2.51□□□□□ -2.01
CTF18YMR078C AHC2P25649 128 aa2.51□□□□□ -2.01
CTF18YMR078C RNH202Q05635 350 aa2.51□□□□□ -2.01
CTF18YMR078C IRC23Q08416 157 aa2.51□□□□□ -2.01
CTF18YMR078C ARO7P32178 256 aa2.5□□□□□ -2.01
CTF18YMR078C EGD2P38879 174 aaKnown RBP2.5□□□□□ -2.01
CTF18YMR078C YPL073CP40323 161 aa2.5□□□□□ -2.01
CTF18YMR078C RPL35AP0CX84 120 aaKnown RBP2.5□□□□□ -2.01
CTF18YMR078C RPL35BP0CX85 120 aaKnown RBP2.5□□□□□ -2.01
CTF18YMR078C RPS24AP0CX31 135 aaKnown RBP2.49□□□□□ -2.01
CTF18YMR078C RPS24BP0CX32 135 aaKnown RBP2.49□□□□□ -2.01
CTF18YMR078C FMP32P43557 207 aa2.49□□□□□ -2.01
CTF18YMR078C GPA2P10823 449 aa2.49□□□□□ -2.01
CTF18YMR078C NVJ1P38881 321 aa2.49□□□□□ -2.01
CTF18YMR078C MPD1Q12404 318 aaKnown RBP2.49□□□□□ -2.01
CTF18YMR078C QCR8P08525 94 aa2.48□□□□□ -2.01
CTF18YMR078C MAK5P38112 773 aaPredicted RBP2.48□□□□□ -2.01
CTF18YMR078C YER076CP40049 302 aa2.48□□□□□ -2.01
CTF18YMR078C YMR295CQ03559 197 aa2.48□□□□□ -2.01
CTF18YMR078C SHH4Q06236 168 aa2.48□□□□□ -2.01
CTF18YMR078C FPR1P20081 114 aaKnown RBP2.48□□□□□ -2.01
CTF18YMR078C TRR1P29509 319 aaKnown RBP2.48□□□□□ -2.01
CTF18YMR078C PAM17P36147 197 aa2.48□□□□□ -2.01
CTF18YMR078C GPI14P47088 403 aaKnown RBP2.48□□□□□ -2.01
CTF18YMR078C YLR460CP54007 376 aa2.48□□□□□ -2.01
CTF18YMR078C YDL180WQ12301 547 aa2.48□□□□□ -2.01
CTF18YMR078C YKL102CP34249 101 aa2.47□□□□□ -2.01
CTF18YMR078C YNL247WP53852 767 aaKnown RBP2.47□□□□□ -2.01
CTF18YMR078C VPS71Q03433 280 aa2.47□□□□□ -2.01
CTF18YMR078C GPI17Q04080 534 aa2.47□□□□□ -2.01
CTF18YMR078C SHH3Q04487 196 aa2.47□□□□□ -2.01
CTF18YMR078C FYV12Q08559 129 aa2.46□□□□□ -2.01
CTF18YMR078C IDP1P21954 428 aaKnown RBP2.46□□□□□ -2.02
CTF18YMR078C NSG1P38837 291 aa2.46□□□□□ -2.02
CTF18YMR078C TMA22P47089 198 aaPredicted RBP2.46□□□□□ -2.02
CTF18YMR078C YPR174CQ06616 221 aaPredicted RBP2.46□□□□□ -2.02
CTF18YMR078C YHL018WP38744 120 aaPredicted RBP2.45□□□□□ -2.02
CTF18YMR078C SPC25P40014 221 aa2.45□□□□□ -2.02
CTF18YMR078C YNL033WP53964 284 aa2.45□□□□□ -2.02
CTF18YMR078C YMR253CQ04835 414 aa2.45□□□□□ -2.02
CTF18YMR078C DGK1Q12382 290 aa2.45□□□□□ -2.02
CTF18YMR078C YPR014CQ6B0W2 109 aa2.45□□□□□ -2.02
CTF18YMR078C UBR2Q07963 1872 aa2.45□□□□□ -2.02
CTF18YMR078C SOL1P50278 321 aa2.45□□□□□ -2.02
CTF18YMR078C DAD4P69851 72 aa2.45□□□□□ -2.02
CTF18YMR078C GIM5Q04493 163 aa2.45□□□□□ -2.02
CTF18YMR078C YOR342CQ12182 319 aa2.45□□□□□ -2.02
CTF18YMR078C TVP38P36164 337 aa2.44□□□□□ -2.02
CTF18YMR078C MPA43P53583 542 aaPredicted RBP2.44□□□□□ -2.02
CTF18YMR078C DIG2Q03373 323 aaKnown RBP2.44□□□□□ -2.02
CTF18YMR078C YLR412C-AQ3E742 68 aa2.44□□□□□ -2.02
CTF18YMR078C NSP1P14907 823 aaKnown RBP2.44□□□□□ -2.02
CTF18YMR078C TLG1Q03322 224 aa2.44□□□□□ -2.02
CTF18YMR078C CUP9P41817 306 aa2.43□□□□□ -2.02
CTF18YMR078C ATP20Q12233 115 aa2.43□□□□□ -2.02
CTF18YMR078C MDM35O60200 86 aa2.42□□□□□ -2.02
CTF18YMR078C CPR5P35176 225 aa2.42□□□□□ -2.02
CTF18YMR078C YNL140CP53910 189 aa2.42□□□□□ -2.02
CTF18YMR078C MZM1Q03429 123 aaPredicted RBP2.42□□□□□ -2.02
CTF18YMR078C YPR013CQ12145 317 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms