RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C YJL027CP47063 138 aaPredicted RBP2.13□□□□□ -2.07
VPS9YML097C SOL1P50278 321 aa2.13□□□□□ -2.07
VPS9YML097C YNR077CP53758 84 aa2.13□□□□□ -2.07
VPS9YML097C HSK3P69852 69 aa2.13□□□□□ -2.07
VPS9YML097C YDR476CQ03362 224 aa2.13□□□□□ -2.07
VPS9YML097C MRPS8Q03799 155 aa2.13□□□□□ -2.07
VPS9YML097C VPS68Q12016 184 aa2.13□□□□□ -2.07
VPS9YML097C RDI1Q12434 202 aa2.13□□□□□ -2.07
VPS9YML097C NSP1P14907 823 aaKnown RBP2.12□□□□□ -2.07
VPS9YML097C YCR023CP25351 611 aa2.12□□□□□ -2.07
VPS9YML097C MDH3P32419 343 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
VPS9YML097C FMP23P38231 175 aa2.12□□□□□ -2.07
VPS9YML097C ERV15P38312 142 aa2.12□□□□□ -2.07
VPS9YML097C YER134CP40081 178 aa2.12□□□□□ -2.07
VPS9YML097C TDA4P47153 279 aa2.12□□□□□ -2.07
VPS9YML097C COS6P53344 381 aa2.12□□□□□ -2.07
VPS9YML097C YPR127WQ06494 345 aa2.12□□□□□ -2.07
VPS9YML097C FAB1P34756 2278 aa2.12□□□□□ -2.07
VPS9YML097C POR1P04840 283 aaKnown RBP2.11□□□□□ -2.07
VPS9YML097C BUB2P26448 306 aaPredicted RBP2.11□□□□□ -2.07
VPS9YML097C PEX4P29340 183 aa2.11□□□□□ -2.07
VPS9YML097C YET1P35723 206 aa2.11□□□□□ -2.07
VPS9YML097C YBR285WP38354 144 aa2.11□□□□□ -2.07
VPS9YML097C NSG1P38837 291 aa2.11□□□□□ -2.07
VPS9YML097C TVP23P38962 199 aa2.11□□□□□ -2.07
VPS9YML097C RFC2P40348 353 aa2.11□□□□□ -2.07
VPS9YML097C HRT1Q08273 121 aa2.11□□□□□ -2.07
VPS9YML097C DGK1Q12382 290 aa2.11□□□□□ -2.07
VPS9YML097C YAR023CD6VPM8 179 aa2.1□□□□□ -2.07
VPS9YML097C CSH1P38287 376 aa2.1□□□□□ -2.07
VPS9YML097C VTC1P40046 129 aaRIP-Chip data2.1□□□□□ -2.07not detected
VPS9YML097C YFL019CP43576 117 aa2.1□□□□□ -2.07
VPS9YML097C ERJ5P43613 295 aaPredicted RBP2.1□□□□□ -2.07
VPS9YML097C SBH1P52870 82 aa2.1□□□□□ -2.07
VPS9YML097C DOC1P53068 250 aa2.1□□□□□ -2.07
VPS9YML097C MPA43P53583 542 aaPredicted RBP2.1□□□□□ -2.07
VPS9YML097C YNR062CP53748 327 aa2.1□□□□□ -2.07
VPS9YML097C TMA20P89886 181 aaPredicted RBP2.1□□□□□ -2.07
VPS9YML097C RRP17Q04031 235 aaPredicted RBP2.1□□□□□ -2.07
VPS9YML097C NSL1Q12143 216 aa2.1□□□□□ -2.07
VPS9YML097C ODC2Q99297 307 aa2.1□□□□□ -2.07
VPS9YML097C CLB6P32943 380 aa2.1□□□□□ -2.07
VPS9YML097C YOR062CP36025 268 aa2.1□□□□□ -2.07
VPS9YML097C SRP102P36057 244 aaPredicted RBP2.1□□□□□ -2.07
VPS9YML097C PHO88P38264 188 aaPredicted RBP2.1□□□□□ -2.07
VPS9YML097C SLM6P38343 150 aa2.1□□□□□ -2.07
VPS9YML097C TIR3P40552 269 aa2.1□□□□□ -2.07
VPS9YML097C VPS71Q03433 280 aa2.1□□□□□ -2.07
VPS9YML097C NAT3Q06504 195 aa2.1□□□□□ -2.07
VPS9YML097C FYV12Q08559 129 aa2.1□□□□□ -2.07
VPS9YML097C EMC6Q12431 108 aa2.1□□□□□ -2.07
VPS9YML097C PET54P10834 293 aa2.09□□□□□ -2.08
VPS9YML097C SPO13P23624 291 aa2.09□□□□□ -2.08
VPS9YML097C PEX34P25584 144 aa2.09□□□□□ -2.08
VPS9YML097C KDX1P36005 433 aa2.09□□□□□ -2.08
VPS9YML097C NQM1P53228 333 aaPredicted RBP2.09□□□□□ -2.08
VPS9YML097C DIG2Q03373 323 aaKnown RBP2.09□□□□□ -2.08
VPS9YML097C YMR295CQ03559 197 aa2.09□□□□□ -2.08
VPS9YML097C YPR202WQ08993 238 aa2.09□□□□□ -2.08
VPS9YML097C UTR5P32630 166 aa2.08□□□□□ -2.08
VPS9YML097C YAP3P38749 330 aa2.08□□□□□ -2.08
VPS9YML097C YNL217WP40152 326 aa2.08□□□□□ -2.08
VPS9YML097C BOL2P53082 120 aa2.08□□□□□ -2.08
VPS9YML097C YGL101WP53144 215 aa2.08□□□□□ -2.08
VPS9YML097C MPC3P53311 146 aa2.08□□□□□ -2.08
VPS9YML097C CYT2Q00873 224 aa2.08□□□□□ -2.08
VPS9YML097C THI74Q04083 370 aa2.08□□□□□ -2.08
VPS9YML097C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
VPS9YML097C FSF1Q12029 327 aaKnown RBP2.08□□□□□ -2.08
VPS9YML097C DAS2Q12084 232 aa2.08□□□□□ -2.08
VPS9YML097C RPL2AP0CX45 254 aaKnown RBP2.07□□□□□ -2.08
VPS9YML097C RPL2BP0CX46 254 aaKnown RBP2.07□□□□□ -2.08
VPS9YML097C SCL1P21243 252 aaKnown RBP2.07□□□□□ -2.08
VPS9YML097C CPR5P35176 225 aa2.07□□□□□ -2.08
VPS9YML097C SOK1P40317 901 aa2.07□□□□□ -2.08
VPS9YML097C CUP9P41817 306 aa2.07□□□□□ -2.08
VPS9YML097C TTI2P47168 421 aa2.07□□□□□ -2.08
VPS9YML097C ERG25P53045 309 aa2.07□□□□□ -2.08
VPS9YML097C YLR412C-AQ3E742 68 aa2.07□□□□□ -2.08
VPS9YML097C MET5P47169 1442 aa2.07□□□□□ -2.08
VPS9YML097C YOR1P53049 1477 aa2.06□□□□□ -2.08
VPS9YML097C RAS2P01120 322 aaKnown RBP2.06□□□□□ -2.08
VPS9YML097C STP22P25604 385 aa2.06□□□□□ -2.08
VPS9YML097C FZF1P32805 299 aa2.06□□□□□ -2.08
VPS9YML097C PAM17P36147 197 aa2.06□□□□□ -2.08
VPS9YML097C YHR022CP38763 256 aa2.06□□□□□ -2.08
VPS9YML097C AGE2P40529 298 aa2.06□□□□□ -2.08
VPS9YML097C LSM1P47017 172 aaKnown RBP2.06□□□□□ -2.08
VPS9YML097C RGM1Q00453 211 aa2.06□□□□□ -2.08
VPS9YML097C YMR253CQ04835 414 aa2.06□□□□□ -2.08
VPS9YML097C YDL180WQ12301 547 aa2.06□□□□□ -2.08
VPS9YML097C UBI4P0CG63 381 aaKnown RBP2.05□□□□□ -2.08
VPS9YML097C TIR1P10863 254 aa2.05□□□□□ -2.08
VPS9YML097C SPC25P40014 221 aa2.05□□□□□ -2.08
VPS9YML097C TIM13P53299 105 aa2.05□□□□□ -2.08
VPS9YML097C LSM3P57743 89 aaKnown RBP2.05□□□□□ -2.08
VPS9YML097C YDC1Q02896 317 aa2.05□□□□□ -2.08
VPS9YML097C GAL83Q04739 417 aa2.05□□□□□ -2.08
VPS9YML097C YLR046CQ12253 270 aa2.05□□□□□ -2.08
VPS9YML097C EFG1Q3E705 233 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms