RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C VTC1P40046 129 aaRIP-Chip data1.77□□□□□ -2.13not detected
NYV1YLR093C RFC2P40348 353 aa1.77□□□□□ -2.13
NYV1YLR093C YFL019CP43576 117 aa1.77□□□□□ -2.13
NYV1YLR093C LSM1P47017 172 aaKnown RBP1.77□□□□□ -2.13
NYV1YLR093C GPI14P47088 403 aaKnown RBP1.77□□□□□ -2.13
NYV1YLR093C MOG1P47123 218 aa1.77□□□□□ -2.13
NYV1YLR093C SLM2P53955 656 aa1.77□□□□□ -2.13
NYV1YLR093C YDR274CP87283 123 aa1.77□□□□□ -2.13
NYV1YLR093C PLP1Q04004 230 aa1.77□□□□□ -2.13
NYV1YLR093C YPR127WQ06494 345 aa1.77□□□□□ -2.13
NYV1YLR093C FSF1Q12029 327 aaKnown RBP1.77□□□□□ -2.13
NYV1YLR093C DAS2Q12084 232 aa1.77□□□□□ -2.13
NYV1YLR093C YDL180WQ12301 547 aa1.77□□□□□ -2.13
NYV1YLR093C DGK1Q12382 290 aa1.77□□□□□ -2.13
NYV1YLR093C YLR412C-AQ3E742 68 aa1.77□□□□□ -2.13
NYV1YLR093C RPS28AQ3E7X9 67 aaPredicted RBP1.77□□□□□ -2.13
NYV1YLR093C ODC2Q99297 307 aa1.77□□□□□ -2.13
NYV1YLR093C BEM2P39960 2167 aaKnown RBP1.76□□□□□ -2.13
NYV1YLR093C YAR023CD6VPM8 179 aa1.76□□□□□ -2.13
NYV1YLR093C CLB6P32943 380 aa1.76□□□□□ -2.13
NYV1YLR093C CSH1P38287 376 aa1.76□□□□□ -2.13
NYV1YLR093C YBR285WP38354 144 aa1.76□□□□□ -2.13
NYV1YLR093C NSG1P38837 291 aa1.76□□□□□ -2.13
NYV1YLR093C YER134CP40081 178 aa1.76□□□□□ -2.13
NYV1YLR093C YNL200CP40165 246 aaKnown RBP1.76□□□□□ -2.13
NYV1YLR093C TTI2P47168 421 aa1.76□□□□□ -2.13
NYV1YLR093C SBH2P52871 88 aa1.76□□□□□ -2.13
NYV1YLR093C NQM1P53228 333 aaPredicted RBP1.76□□□□□ -2.13
NYV1YLR093C YGR219WP53307 113 aa1.76□□□□□ -2.13
NYV1YLR093C MPC3P53311 146 aa1.76□□□□□ -2.13
NYV1YLR093C RDS3Q06835 107 aaPredicted RBP1.76□□□□□ -2.13
NYV1YLR093C YOR342CQ12182 319 aa1.76□□□□□ -2.13
NYV1YLR093C YML100W-AQ8TGT0 57 aa1.76□□□□□ -2.13
NYV1YLR093C YIL177CP40434 1758 aa1.75□□□□□ -2.13
NYV1YLR093C YJL225CP40889 1758 aa1.75□□□□□ -2.13
NYV1YLR093C PDR18P53756 1333 aa1.75□□□□□ -2.13
NYV1YLR093C POR1P04840 283 aaKnown RBP1.75□□□□□ -2.13
NYV1YLR093C CPA1P07258 411 aaKnown RBP1.75□□□□□ -2.13
NYV1YLR093C SNC2P33328 115 aa1.75□□□□□ -2.13
NYV1YLR093C SRP102P36057 244 aaPredicted RBP1.75□□□□□ -2.13
NYV1YLR093C AVT2P39981 480 aa1.75□□□□□ -2.13
NYV1YLR093C XPT1P47165 209 aa1.75□□□□□ -2.13
NYV1YLR093C YGL101WP53144 215 aa1.75□□□□□ -2.13
NYV1YLR093C MAK3Q03503 176 aa1.75□□□□□ -2.13
NYV1YLR093C RRP17Q04031 235 aaPredicted RBP1.75□□□□□ -2.13
NYV1YLR093C YLR046CQ12253 270 aa1.75□□□□□ -2.13
NYV1YLR093C FKS1P38631 1876 aaKnown RBP1.75□□□□□ -2.13
NYV1YLR093C UBI4P0CG63 381 aaKnown RBP1.74□□□□□ -2.13
NYV1YLR093C CPR5P35176 225 aa1.74□□□□□ -2.13
NYV1YLR093C YOR062CP36025 268 aa1.74□□□□□ -2.13
NYV1YLR093C SHE2P36068 246 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
NYV1YLR093C RPL33BP41056 107 aaKnown RBP1.74□□□□□ -2.13
NYV1YLR093C BOL2P53082 120 aa1.74□□□□□ -2.13
NYV1YLR093C ORM1P53224 222 aa1.74□□□□□ -2.13
NYV1YLR093C TMA20P89886 181 aaPredicted RBP1.74□□□□□ -2.13
NYV1YLR093C YMR099CQ03161 297 aaKnown RBP1.74□□□□□ -2.13
NYV1YLR093C VPS71Q03433 280 aa1.74□□□□□ -2.13
NYV1YLR093C MRPS8Q03799 155 aa1.74□□□□□ -2.13
NYV1YLR093C THI74Q04083 370 aa1.74□□□□□ -2.13
NYV1YLR093C YPR202WQ08993 238 aa1.74□□□□□ -2.13
NYV1YLR093C ATO3Q12359 275 aa1.74□□□□□ -2.13
NYV1YLR093C PET54P10834 293 aa1.73□□□□□ -2.13
NYV1YLR093C TIR1P10863 254 aa1.73□□□□□ -2.13
NYV1YLR093C SCL1P21243 252 aaKnown RBP1.73□□□□□ -2.13
NYV1YLR093C PEX4P29340 183 aa1.73□□□□□ -2.13
NYV1YLR093C YET1P35723 206 aa1.73□□□□□ -2.13
NYV1YLR093C FYV4P38783 130 aaPredicted RBP1.73□□□□□ -2.13
NYV1YLR093C FCY21P40039 528 aa1.73□□□□□ -2.13
NYV1YLR093C TIR3P40552 269 aa1.73□□□□□ -2.13
NYV1YLR093C YFR054CP43622 192 aa1.73□□□□□ -2.13
NYV1YLR093C YJL027CP47063 138 aaPredicted RBP1.73□□□□□ -2.13
NYV1YLR093C YNR077CP53758 84 aa1.73□□□□□ -2.13
NYV1YLR093C DAD3P69850 94 aa1.73□□□□□ -2.13
NYV1YLR093C RGM1Q00453 211 aa1.73□□□□□ -2.13
NYV1YLR093C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
NYV1YLR093C EMC6Q12431 108 aa1.73□□□□□ -2.13
NYV1YLR093C ATG40Q99325 256 aa1.73□□□□□ -2.13
NYV1YLR093C RAS2P01120 322 aaKnown RBP1.72□□□□□ -2.13
NYV1YLR093C RPL2AP0CX45 254 aaKnown RBP1.72□□□□□ -2.13
NYV1YLR093C RPL2BP0CX46 254 aaKnown RBP1.72□□□□□ -2.13
NYV1YLR093C PHO85P17157 305 aa1.72□□□□□ -2.13
NYV1YLR093C BUB2P26448 306 aaPredicted RBP1.72□□□□□ -2.13
NYV1YLR093C PHO88P38264 188 aaPredicted RBP1.72□□□□□ -2.13
NYV1YLR093C ERV15P38312 142 aa1.72□□□□□ -2.13
NYV1YLR093C SVP26P38869 228 aa1.72□□□□□ -2.13
NYV1YLR093C CIS3P47001 227 aa1.72□□□□□ -2.13
NYV1YLR093C EAF6P47128 113 aa1.72□□□□□ -2.13
NYV1YLR093C LSM3P57743 89 aaKnown RBP1.72□□□□□ -2.13
NYV1YLR093C FYV12Q08559 129 aa1.72□□□□□ -2.13
NYV1YLR093C NUF2P33895 451 aa1.71□□□□□ -2.14
NYV1YLR093C VMA22P38784 181 aa1.71□□□□□ -2.14
NYV1YLR093C IPI1P38803 334 aaPredicted RBP1.71□□□□□ -2.14
NYV1YLR093C SPC25P40014 221 aa1.71□□□□□ -2.14
NYV1YLR093C APQ12P40532 138 aa1.71□□□□□ -2.14
NYV1YLR093C ERJ5P43613 295 aaPredicted RBP1.71□□□□□ -2.14
NYV1YLR093C YDR476CQ03362 224 aa1.71□□□□□ -2.14
NYV1YLR093C MIX17Q03667 156 aa1.71□□□□□ -2.14
NYV1YLR093C CGI121Q03705 181 aaKnown RBP1.71□□□□□ -2.14
NYV1YLR093C GAL83Q04739 417 aa1.71□□□□□ -2.14
NYV1YLR093C ATP20Q12233 115 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms