RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W YBR285WP38354 144 aa2.33□□□□□ -2.04
VMA5YKL080W PGD1P40356 397 aa2.33□□□□□ -2.04
VMA5YKL080W DLS1P40366 167 aa2.33□□□□□ -2.04
VMA5YKL080W APQ12P40532 138 aa2.33□□□□□ -2.04
VMA5YKL080W GLR1P41921 483 aaKnown RBP2.33□□□□□ -2.04
VMA5YKL080W YJR111CP47148 283 aaKnown RBP2.33□□□□□ -2.04
VMA5YKL080W TTI2P47168 421 aa2.33□□□□□ -2.04
VMA5YKL080W HHT1P61830 136 aa2.33□□□□□ -2.04
VMA5YKL080W CSN9Q03981 162 aa2.33□□□□□ -2.04
VMA5YKL080W YOR268CQ08734 132 aa2.33□□□□□ -2.04
VMA5YKL080W ATP14Q12349 124 aa2.33□□□□□ -2.04
VMA5YKL080W ATP15P21306 62 aa2.32□□□□□ -2.04
VMA5YKL080W PEX34P25584 144 aa2.32□□□□□ -2.04
VMA5YKL080W UBC8P28263 218 aa2.32□□□□□ -2.04
VMA5YKL080W GPI14P47088 403 aaKnown RBP2.32□□□□□ -2.04
VMA5YKL080W CCC1P47818 322 aa2.32□□□□□ -2.04
VMA5YKL080W AIF1P52923 378 aa2.32□□□□□ -2.04
VMA5YKL080W LSM3P57743 89 aaKnown RBP2.32□□□□□ -2.04
VMA5YKL080W VPS71Q03433 280 aa2.32□□□□□ -2.04
VMA5YKL080W MRPS8Q03799 155 aa2.32□□□□□ -2.04
VMA5YKL080W ARR2Q06597 130 aa2.32□□□□□ -2.04
VMA5YKL080W YML100W-AQ8TGT0 57 aa2.32□□□□□ -2.04
VMA5YKL080W RPL26AP05743 127 aaKnown RBP2.31□□□□□ -2.04
VMA5YKL080W UBI4P0CG63 381 aaKnown RBP2.31□□□□□ -2.04
VMA5YKL080W YCR023CP25351 611 aa2.31□□□□□ -2.04
VMA5YKL080W STP22P25604 385 aa2.31□□□□□ -2.04
VMA5YKL080W YET1P35723 206 aa2.31□□□□□ -2.04
VMA5YKL080W IPI1P38803 334 aaPredicted RBP2.31□□□□□ -2.04
VMA5YKL080W RPL26BP53221 127 aaKnown RBP2.31□□□□□ -2.04
VMA5YKL080W YGR219WP53307 113 aa2.31□□□□□ -2.04
VMA5YKL080W YMR295CQ03559 197 aa2.31□□□□□ -2.04
VMA5YKL080W NEJ1Q06148 342 aa2.31□□□□□ -2.04
VMA5YKL080W YOR214CQ12282 236 aa2.31□□□□□ -2.04
VMA5YKL080W DGK1Q12382 290 aa2.31□□□□□ -2.04
VMA5YKL080W PDR18P53756 1333 aa2.31□□□□□ -2.04
VMA5YKL080W YAR023CD6VPM8 179 aa2.3□□□□□ -2.04
VMA5YKL080W FMT1P32785 401 aa2.3□□□□□ -2.04
VMA5YKL080W PAN3P36102 679 aaPredicted RBP2.3□□□□□ -2.04
VMA5YKL080W PRM10P42946 383 aa2.3□□□□□ -2.04
VMA5YKL080W THI74Q04083 370 aa2.3□□□□□ -2.04
VMA5YKL080W SHH3Q04487 196 aa2.3□□□□□ -2.04
VMA5YKL080W IES4Q08561 116 aa2.3□□□□□ -2.04
VMA5YKL080W FSF1Q12029 327 aaKnown RBP2.3□□□□□ -2.04
VMA5YKL080W YHR032W-AP0C5N6 59 aa2.29□□□□□ -2.04
VMA5YKL080W OPY1P38271 328 aa2.29□□□□□ -2.04
VMA5YKL080W VMA22P38784 181 aa2.29□□□□□ -2.04
VMA5YKL080W CTR2P38865 189 aa2.29□□□□□ -2.04
VMA5YKL080W CYC2P38909 366 aa2.29□□□□□ -2.04
VMA5YKL080W FCY21P40039 528 aa2.29□□□□□ -2.04
VMA5YKL080W NSA2P40078 261 aaKnown RBP2.29□□□□□ -2.04
VMA5YKL080W YDR366CP87287 132 aa2.29□□□□□ -2.04
VMA5YKL080W YDR391CQ04170 232 aa2.29□□□□□ -2.04
VMA5YKL080W YOL014WQ08110 124 aa2.29□□□□□ -2.04
VMA5YKL080W FEX1Q08913 375 aa2.29□□□□□ -2.04
VMA5YKL080W FEX2Q08991 375 aa2.29□□□□□ -2.04
VMA5YKL080W DAS2Q12084 232 aa2.29□□□□□ -2.04
VMA5YKL080W RAS2P01120 322 aaKnown RBP2.28□□□□□ -2.04
VMA5YKL080W CIN5P40917 295 aa2.28□□□□□ -2.04
VMA5YKL080W PHB1P40961 287 aa2.28□□□□□ -2.04
VMA5YKL080W YDR274CP87283 123 aa2.28□□□□□ -2.04
VMA5YKL080W PST2Q12335 198 aaKnown RBP2.28□□□□□ -2.04
VMA5YKL080W YPR096CO13587 100 aa2.27□□□□□ -2.05
VMA5YKL080W RPL2AP0CX45 254 aaKnown RBP2.27□□□□□ -2.05
VMA5YKL080W RPL2BP0CX46 254 aaKnown RBP2.27□□□□□ -2.05
VMA5YKL080W YBR209WP38311 105 aa2.27□□□□□ -2.05
VMA5YKL080W SLM6P38343 150 aa2.27□□□□□ -2.05
VMA5YKL080W CUP9P41817 306 aa2.27□□□□□ -2.05
VMA5YKL080W YGR201CP42936 225 aa2.27□□□□□ -2.05
VMA5YKL080W YFL019CP43576 117 aa2.27□□□□□ -2.05
VMA5YKL080W DOC1P53068 250 aa2.27□□□□□ -2.05
VMA5YKL080W YGR039WP53225 103 aa2.27□□□□□ -2.05
VMA5YKL080W DAD3P69850 94 aa2.27□□□□□ -2.05
VMA5YKL080W VPS28Q02767 242 aa2.27□□□□□ -2.05
VMA5YKL080W NAT3Q06504 195 aa2.27□□□□□ -2.05
VMA5YKL080W YPR202WQ08993 238 aa2.27□□□□□ -2.05
VMA5YKL080W ATP5P09457 212 aa2.26□□□□□ -2.05
VMA5YKL080W RPS23AP0CX29 145 aaKnown RBP2.26□□□□□ -2.05
VMA5YKL080W RPS23BP0CX30 145 aa2.26□□□□□ -2.05
VMA5YKL080W NHP6AP11632 93 aaKnown RBP2.26□□□□□ -2.05
VMA5YKL080W RPL30P14120 105 aaKnown RBP2.26□□□□□ -2.05
VMA5YKL080W NSP1P14907 823 aaKnown RBP2.26□□□□□ -2.05
VMA5YKL080W HSP30P25619 332 aa2.26□□□□□ -2.05
VMA5YKL080W SUA7P29055 345 aaPredicted RBP2.26□□□□□ -2.05
VMA5YKL080W CLB6P32943 380 aa2.26□□□□□ -2.05
VMA5YKL080W ERV15P38312 142 aa2.26□□□□□ -2.05
VMA5YKL080W SVP26P38869 228 aa2.26□□□□□ -2.05
VMA5YKL080W YPL073CP40323 161 aa2.26□□□□□ -2.05
VMA5YKL080W TIR3P40552 269 aa2.26□□□□□ -2.05
VMA5YKL080W RPL33BP41056 107 aaKnown RBP2.26□□□□□ -2.05
VMA5YKL080W SMD3P43321 101 aaKnown RBP2.26□□□□□ -2.05
VMA5YKL080W CAB4P53332 305 aa2.26□□□□□ -2.05
VMA5YKL080W ATO3Q12359 275 aa2.26□□□□□ -2.05
VMA5YKL080W ATG40Q99325 256 aa2.26□□□□□ -2.05
VMA5YKL080W YOR1P53049 1477 aa2.26□□□□□ -2.05
VMA5YKL080W POR1P04840 283 aaKnown RBP2.25□□□□□ -2.05
VMA5YKL080W RAD6P06104 172 aa2.25□□□□□ -2.05
VMA5YKL080W SCL1P21243 252 aaKnown RBP2.25□□□□□ -2.05
VMA5YKL080W PTC1P35182 281 aa2.25□□□□□ -2.05
VMA5YKL080W SPC25P40014 221 aa2.25□□□□□ -2.05
VMA5YKL080W VTC1P40046 129 aaRIP-Chip data2.25□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms