RNA–Protein interactions for RNA: YHL009W-A

YHL009W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHL009W-A, Length 1,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-AYHL009W-A UMP1P38293 148 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A YBR285WP38354 144 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A CTR2P38865 189 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A YHR180WP38868 163 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A GVP36P40531 326 aaKnown RBP0.9□□□□□ -2.27
YHL009W-AYHL009W-A RPL33BP41056 107 aaKnown RBP0.9□□□□□ -2.27
YHL009W-AYHL009W-A SER2P42941 309 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A PRM10P42946 383 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A EAF6P47128 113 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A YGL235WP53071 178 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A PGA1P53896 198 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A YDR274CP87283 123 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A GPI17Q04080 534 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A ARR2Q06597 130 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A MPD1Q12404 318 aaKnown RBP0.9□□□□□ -2.27
YHL009W-AYHL009W-A RPS28AQ3E7X9 67 aaPredicted RBP0.9□□□□□ -2.27
YHL009W-AYHL009W-A YML100W-AQ8TGT0 57 aa0.9□□□□□ -2.27
YHL009W-AYHL009W-A PDR18P53756 1333 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A MET5P47169 1442 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A YOR1P53049 1477 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A ATP15P21306 62 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A BUB2P26448 306 aaPredicted RBP0.89□□□□□ -2.27
YHL009W-AYHL009W-A FMP23P38231 175 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A PHO88P38264 188 aaPredicted RBP0.89□□□□□ -2.27
YHL009W-AYHL009W-A DER1P38307 211 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A NSG1P38837 291 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A YEA4P40004 342 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A RFC2P40348 353 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A GPI14P47088 403 aaKnown RBP0.89□□□□□ -2.27
YHL009W-AYHL009W-A YJR111CP47148 283 aaKnown RBP0.89□□□□□ -2.27
YHL009W-AYHL009W-A TDA4P47153 279 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A XPT1P47165 209 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A ERG25P53045 309 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A TIM13P53299 105 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A YMR295CQ03559 197 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A SPG3Q04398 127 aaPredicted RBP0.89□□□□□ -2.27
YHL009W-AYHL009W-A MEU1Q07938 337 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
YHL009W-AYHL009W-A YOL014WQ08110 124 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A ODC2Q99297 307 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A TAF2P23255 1407 aa0.89□□□□□ -2.27
YHL009W-AYHL009W-A YAR023CD6VPM8 179 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A RAS2P01120 322 aaKnown RBP0.88□□□□□ -2.27
YHL009W-AYHL009W-A PBI2P0CT04 75 aaKnown RBP0.88□□□□□ -2.27
YHL009W-AYHL009W-A NSP1P14907 823 aaKnown RBP0.88□□□□□ -2.27
YHL009W-AYHL009W-A SPO13P23624 291 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A ERV15P38312 142 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A YAP3P38749 330 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A TVP23P38962 199 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A EDC3P39998 551 aaKnown RBP0.88□□□□□ -2.27
YHL009W-AYHL009W-A VTC1P40046 129 aaRIP-Chip data0.88□□□□□ -2.27not detected
YHL009W-AYHL009W-A TIR3P40552 269 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A CUP9P41817 306 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A DAD3P69850 94 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A VPS28Q02767 242 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A MRPS8Q03799 155 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A YPR127WQ06494 345 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A NSL1Q12143 216 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A RDI1Q12434 202 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A YLR412C-AQ3E742 68 aa0.88□□□□□ -2.27
YHL009W-AYHL009W-A POR1P04840 283 aaKnown RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A SCL1P21243 252 aaKnown RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A PEX34P25584 144 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A NUF2P33895 451 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A KDX1P36005 433 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A SHE2P36068 246 aaKnown RBP RIP-Chip data0.87□□□□□ -2.27not detected
YHL009W-AYHL009W-A SLM6P38343 150 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A YNL217WP40152 326 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A AYR1P40471 297 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A YFL019CP43576 117 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A ERJ5P43613 295 aaPredicted RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A LSM1P47017 172 aaKnown RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A DOC1P53068 250 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A BOL2P53082 120 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A SAY1P53324 424 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A MPA43P53583 542 aaPredicted RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A YNR077CP53758 84 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A GRX5Q02784 150 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A YMR099CQ03161 297 aaKnown RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A VPS71Q03433 280 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A FSF1Q12029 327 aaKnown RBP0.87□□□□□ -2.27
YHL009W-AYHL009W-A YDL180WQ12301 547 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A DGK1Q12382 290 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A ATG40Q99325 256 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A TRM3Q07527 1436 aa0.87□□□□□ -2.27
YHL009W-AYHL009W-A PET54P10834 293 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A STP22P25604 385 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A FZF1P32805 299 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A YBR209WP38311 105 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A SVP26P38869 228 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A SOK1P40317 901 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A GLR1P41921 483 aaKnown RBP0.86□□□□□ -2.27
YHL009W-AYHL009W-A TTI2P47168 421 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A SBH1P52870 82 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A YGL101WP53144 215 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A YNR062CP53748 327 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A LSM3P57743 89 aaKnown RBP0.86□□□□□ -2.27
YHL009W-AYHL009W-A HHT1P61830 136 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A HSK3P69852 69 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A CYT2Q00873 224 aa0.86□□□□□ -2.27
YHL009W-AYHL009W-A YKR005CQ02203 525 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms