RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C ENV7Q12003 364 aa10.32□□□□□ -0.76
SHU1YHL006C ATG31Q12421 196 aa10.32□□□□□ -0.76
SHU1YHL006C SPS2P08459 502 aa10.31□□□□□ -0.76
SHU1YHL006C NHP6BP11633 99 aaKnown RBP10.31□□□□□ -0.76
SHU1YHL006C ERV15P38312 142 aa10.31□□□□□ -0.76
SHU1YHL006C MRPL49P40858 161 aaPredicted RBP10.31□□□□□ -0.76
SHU1YHL006C YGL258W-AQ3E740 77 aa10.31□□□□□ -0.76
SHU1YHL006C ERV1P27882 189 aa10.3□□□□□ -0.76
SHU1YHL006C BFR1P38934 470 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
SHU1YHL006C GPG1P53130 126 aa10.3□□□□□ -0.76
SHU1YHL006C CPD1P53314 239 aa10.3□□□□□ -0.76
SHU1YHL006C SSU72P53538 206 aaPredicted RBP10.3□□□□□ -0.76
SHU1YHL006C VPS28Q02767 242 aa10.3□□□□□ -0.76
SHU1YHL006C TRM13Q12383 476 aa10.3□□□□□ -0.76
SHU1YHL006C PET494P07390 489 aaPredicted RBP10.29□□□□□ -0.76
SHU1YHL006C YKE4P40544 346 aa10.29□□□□□ -0.76
SHU1YHL006C EST3Q03096 181 aa10.29□□□□□ -0.76
SHU1YHL006C YCT1Q12235 531 aa10.29□□□□□ -0.76
SHU1YHL006C TPI1P00942 248 aaKnown RBP10.28□□□□□ -0.76
SHU1YHL006C RPS8AP0CX39 200 aaKnown RBP10.28□□□□□ -0.76
SHU1YHL006C RPS8BP0CX40 200 aaKnown RBP10.28□□□□□ -0.76
SHU1YHL006C MRPL3P36516 390 aa10.28□□□□□ -0.76
SHU1YHL006C MIC12P38341 106 aa10.28□□□□□ -0.76
SHU1YHL006C YAR068WP39564 161 aa10.28□□□□□ -0.76
SHU1YHL006C YNL194CP40169 301 aa10.28□□□□□ -0.76
SHU1YHL006C YGR050CP53231 118 aa10.28□□□□□ -0.76
SHU1YHL006C DYN2Q02647 92 aa10.28□□□□□ -0.76
SHU1YHL006C GRH1Q04410 372 aaKnown RBP10.28□□□□□ -0.76
SHU1YHL006C TRP4P07285 380 aaPredicted RBP10.27□□□□□ -0.77
SHU1YHL006C URA5P13298 226 aaKnown RBP10.27□□□□□ -0.77
SHU1YHL006C IMD2P38697 523 aaKnown RBP10.27□□□□□ -0.77
SHU1YHL006C DUO1P53168 247 aaKnown RBP10.27□□□□□ -0.77
SHU1YHL006C MRP17P28778 131 aa10.26□□□□□ -0.77
SHU1YHL006C ACT1P60010 375 aaKnown RBP10.26□□□□□ -0.77
SHU1YHL006C RAD28Q12021 506 aa10.26□□□□□ -0.77
SHU1YHL006C SUA5P32579 426 aa10.25□□□□□ -0.77
SHU1YHL006C SWT21P53873 357 aaPredicted RBP10.25□□□□□ -0.77
SHU1YHL006C PEX10Q05568 337 aa10.25□□□□□ -0.77
SHU1YHL006C YLR281CQ05863 155 aa10.25□□□□□ -0.77
SHU1YHL006C YBR242WP38331 238 aa10.24□□□□□ -0.77
SHU1YHL006C BUL1P48524 976 aa10.24□□□□□ -0.77
SHU1YHL006C CAX4P53223 239 aa10.24□□□□□ -0.77
SHU1YHL006C MSO1P53604 210 aaKnown RBP10.24□□□□□ -0.77
SHU1YHL006C AUA1P32450 94 aa10.23□□□□□ -0.77
SHU1YHL006C SDH4P37298 181 aa10.23□□□□□ -0.77
SHU1YHL006C DOG2P38773 246 aa10.23□□□□□ -0.77
SHU1YHL006C DOG1P38774 246 aa10.23□□□□□ -0.77
SHU1YHL006C FLO5P38894 1075 aa10.23□□□□□ -0.77
SHU1YHL006C ECM27P47144 725 aa10.23□□□□□ -0.77
SHU1YHL006C MSC3Q05812 728 aa10.23□□□□□ -0.77
SHU1YHL006C YLR224WQ05947 369 aa10.23□□□□□ -0.77
SHU1YHL006C PDC2P32896 925 aa10.22□□□□□ -0.77
SHU1YHL006C ECM33P38248 429 aaKnown RBP10.22□□□□□ -0.77
SHU1YHL006C ARO8P53090 500 aaKnown RBP10.22□□□□□ -0.77
SHU1YHL006C RXT3Q07458 294 aa10.22□□□□□ -0.77
SHU1YHL006C YPR013CQ12145 317 aa10.22□□□□□ -0.77
SHU1YHL006C TFB5Q3E7C1 72 aaPredicted RBP10.22□□□□□ -0.77
SHU1YHL006C PUT1P09368 476 aa10.21□□□□□ -0.77
SHU1YHL006C MRS3P10566 314 aa10.21□□□□□ -0.77
SHU1YHL006C GRX2P17695 143 aaKnown RBP10.21□□□□□ -0.77
SHU1YHL006C YRA2P36036 203 aaKnown RBP RIP-Chip data10.21□□□□□ -0.77not detected
SHU1YHL006C YKL162CP36052 402 aa10.21□□□□□ -0.77
SHU1YHL006C MPC2P38857 129 aa10.21□□□□□ -0.77
SHU1YHL006C NSA2P40078 261 aaKnown RBP10.21□□□□□ -0.77
SHU1YHL006C YGR210CP42942 411 aa10.21□□□□□ -0.77
SHU1YHL006C NCE103P53615 221 aa10.21□□□□□ -0.77
SHU1YHL006C LRS4Q04087 347 aaKnown RBP10.21□□□□□ -0.77
SHU1YHL006C TAR1Q8TGM6 124 aa10.21□□□□□ -0.77
SHU1YHL006C QDR3P38227 689 aa10.2□□□□□ -0.78
SHU1YHL006C WSS1P38838 269 aa10.2□□□□□ -0.78
SHU1YHL006C YIR035CP40579 254 aa10.2□□□□□ -0.78
SHU1YHL006C TDA6Q06466 467 aa10.2□□□□□ -0.78
SHU1YHL006C YOR352WQ08816 343 aa10.2□□□□□ -0.78
SHU1YHL006C COX2P00410 251 aa10.19□□□□□ -0.78
SHU1YHL006C ARG80P07249 177 aa10.19□□□□□ -0.78
SHU1YHL006C CDS1P38221 457 aa10.19□□□□□ -0.78
SHU1YHL006C GET2P40056 285 aa10.19□□□□□ -0.78
SHU1YHL006C YPI1P43587 155 aa10.19□□□□□ -0.78
SHU1YHL006C HCH1P53834 153 aa10.19□□□□□ -0.78
SHU1YHL006C YDR274CP87283 123 aa10.19□□□□□ -0.78
SHU1YHL006C FRQ1Q06389 190 aa10.19□□□□□ -0.78
SHU1YHL006C YPS3Q12303 508 aa10.19□□□□□ -0.78
SHU1YHL006C CYC3P06182 269 aa10.18□□□□□ -0.78
SHU1YHL006C ALK2P32789 676 aaPredicted RBP10.18□□□□□ -0.78
SHU1YHL006C YIF1P53845 314 aaKnown RBP10.18□□□□□ -0.78
SHU1YHL006C MRPS16Q02608 121 aa10.18□□□□□ -0.78
SHU1YHL006C PAA1Q12447 191 aaKnown RBP10.18□□□□□ -0.78
SHU1YHL006C YBL071CP38185 102 aa10.17□□□□□ -0.78
SHU1YHL006C YPC1P38298 316 aa10.17□□□□□ -0.78
SHU1YHL006C YER137CP40083 148 aaKnown RBP10.17□□□□□ -0.78
SHU1YHL006C POC4Q12245 148 aaPredicted RBP10.17□□□□□ -0.78
SHU1YHL006C AIM45Q12480 344 aaKnown RBP10.17□□□□□ -0.78
SHU1YHL006C COA2Q3E823 68 aa10.17□□□□□ -0.78
SHU1YHL006C SEC22P22214 214 aa10.16□□□□□ -0.78
SHU1YHL006C RRT1P38192 103 aa10.16□□□□□ -0.78
SHU1YHL006C SNU13P39990 126 aaKnown RBP10.16□□□□□ -0.78
SHU1YHL006C YPL264CQ08980 353 aa10.16□□□□□ -0.78
SHU1YHL006C HAM1P47119 197 aaKnown RBP10.15□□□□□ -0.78
SHU1YHL006C ERV25P54837 211 aaKnown RBP10.15□□□□□ -0.78
SHU1YHL006C TIM18Q08749 192 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 108.9 ms