RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W YMR244WQ04018 355 aa3.31□□□□□ -1.88
PTR3YFR029W ZEO1Q08245 113 aa3.31□□□□□ -1.88
PTR3YFR029W TY1B-HO13535 1793 aa3.31□□□□□ -1.88
PTR3YFR029W PTC1P35182 281 aa3.31□□□□□ -1.88
PTR3YFR029W SKI6P46948 246 aaPredicted RBP3.31□□□□□ -1.88
PTR3YFR029W DAD3P69850 94 aa3.31□□□□□ -1.88
PTR3YFR029W TAD3Q9URQ3 322 aa3.31□□□□□ -1.88
PTR3YFR029W TIR1P10863 254 aa3.3□□□□□ -1.88
PTR3YFR029W FMP46P36141 133 aaKnown RBP3.3□□□□□ -1.88
PTR3YFR029W YNL200CP40165 246 aaKnown RBP3.3□□□□□ -1.88
PTR3YFR029W ATG18P43601 500 aa3.3□□□□□ -1.88
PTR3YFR029W XPT1P47165 209 aa3.3□□□□□ -1.88
PTR3YFR029W YGR039WP53225 103 aa3.3□□□□□ -1.88
PTR3YFR029W CRH1P53301 507 aa3.3□□□□□ -1.88
PTR3YFR029W ALG9P53868 555 aaKnown RBP3.3□□□□□ -1.88
PTR3YFR029W FMP42Q04991 504 aa3.3□□□□□ -1.88
PTR3YFR029W YTH1Q06102 208 aaPredicted RBP3.3□□□□□ -1.88
PTR3YFR029W SPC3Q12133 184 aa3.3□□□□□ -1.88
PTR3YFR029W ATG5Q12380 294 aa3.3□□□□□ -1.88
PTR3YFR029W VAR1P02381 398 aa3.29□□□□□ -1.88
PTR3YFR029W RPL14AP36105 138 aaKnown RBP3.29□□□□□ -1.88
PTR3YFR029W RPL14BP38754 138 aaKnown RBP3.29□□□□□ -1.88
PTR3YFR029W LSM12P38828 187 aaKnown RBP3.29□□□□□ -1.88
PTR3YFR029W PRM5P40476 318 aa3.29□□□□□ -1.88
PTR3YFR029W YJL028WP47062 111 aa3.29□□□□□ -1.88
PTR3YFR029W PGU1P47180 361 aa3.29□□□□□ -1.88
PTR3YFR029W APJ1P53940 528 aa3.29□□□□□ -1.88
PTR3YFR029W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
PTR3YFR029W YPR114WQ06107 315 aa3.29□□□□□ -1.88
PTR3YFR029W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
PTR3YFR029W YDL211CQ12121 372 aa3.29□□□□□ -1.88
PTR3YFR029W RPC19P28000 142 aaKnown RBP3.29□□□□□ -1.88
PTR3YFR029W CSE2P33308 149 aa3.29□□□□□ -1.88
PTR3YFR029W YND1P40009 630 aa3.29□□□□□ -1.88
PTR3YFR029W YER181CP40097 107 aa3.29□□□□□ -1.88
PTR3YFR029W SCW10Q04951 389 aa3.29□□□□□ -1.88
PTR3YFR029W FCY1Q12178 158 aa3.29□□□□□ -1.88
PTR3YFR029W YNL277W-AQ3E7Z0 62 aa3.29□□□□□ -1.88
PTR3YFR029W REV3P14284 1504 aa3.28□□□□□ -1.88
PTR3YFR029W YOR062CP36025 268 aa3.28□□□□□ -1.88
PTR3YFR029W YER189WP40104 122 aa3.28□□□□□ -1.88
PTR3YFR029W MOB1P40484 314 aa3.28□□□□□ -1.88
PTR3YFR029W YAE1P47118 141 aaPredicted RBP3.28□□□□□ -1.88
PTR3YFR029W TIM13P53299 105 aa3.28□□□□□ -1.88
PTR3YFR029W BUD25P85052 153 aa3.28□□□□□ -1.88
PTR3YFR029W NAT3Q06504 195 aa3.28□□□□□ -1.88
PTR3YFR029W ERG2P32352 222 aa3.27□□□□□ -1.89
PTR3YFR029W PHO89P38361 574 aa3.27□□□□□ -1.89
PTR3YFR029W RPF1P38805 295 aaKnown RBP3.27□□□□□ -1.89
PTR3YFR029W PRE5P40302 234 aaKnown RBP3.27□□□□□ -1.89
PTR3YFR029W YFL019CP43576 117 aa3.27□□□□□ -1.89
PTR3YFR029W TDA4P47153 279 aa3.27□□□□□ -1.89
PTR3YFR029W YLR042CQ07990 161 aa3.27□□□□□ -1.89
PTR3YFR029W MCP1Q12106 302 aa3.27□□□□□ -1.89
PTR3YFR029W IZH2Q12442 317 aa3.27□□□□□ -1.89
PTR3YFR029W YPR014CQ6B0W2 109 aa3.27□□□□□ -1.89
PTR3YFR029W ATP5P09457 212 aa3.27□□□□□ -1.89
PTR3YFR029W YPR170W-BP0C5R9 85 aa3.27□□□□□ -1.89
PTR3YFR029W CPR1P14832 162 aaKnown RBP3.27□□□□□ -1.89
PTR3YFR029W RPB3P16370 318 aaKnown RBP3.27□□□□□ -1.89
PTR3YFR029W SRP21P32342 167 aa3.27□□□□□ -1.89
PTR3YFR029W FYV4P38783 130 aaPredicted RBP3.27□□□□□ -1.89
PTR3YFR029W SNM1P40993 198 aa3.27□□□□□ -1.89
PTR3YFR029W STB1P42845 420 aa3.27□□□□□ -1.89
PTR3YFR029W YGL262WP53054 175 aa3.27□□□□□ -1.89
PTR3YFR029W YOL014WQ08110 124 aa3.27□□□□□ -1.89
PTR3YFR029W OCA6Q12454 224 aa3.27□□□□□ -1.89
PTR3YFR029W BOL1Q3E793 110 aa3.27□□□□□ -1.89
PTR3YFR029W HTL1Q9URQ5 78 aa3.27□□□□□ -1.89
PTR3YFR029W SPP41P38904 1435 aa3.26□□□□□ -1.89
PTR3YFR029W TSC11P40061 1430 aa3.26□□□□□ -1.89
PTR3YFR029W SHB17P36136 271 aaKnown RBP3.26□□□□□ -1.89
PTR3YFR029W AIM18P38884 321 aa3.26□□□□□ -1.89
PTR3YFR029W GPI2P46961 280 aa3.26□□□□□ -1.89
PTR3YFR029W DIE2P50076 525 aa3.26□□□□□ -1.89
PTR3YFR029W YNL033WP53964 284 aa3.26□□□□□ -1.89
PTR3YFR029W YNL019CP53975 284 aa3.26□□□□□ -1.89
PTR3YFR029W YMR099CQ03161 297 aaKnown RBP3.26□□□□□ -1.89
PTR3YFR029W NAG1Q8TGN9 163 aa3.26□□□□□ -1.89
PTR3YFR029W HAP2P06774 265 aa3.26□□□□□ -1.89
PTR3YFR029W SPS2P08459 502 aa3.26□□□□□ -1.89
PTR3YFR029W ATP15P21306 62 aa3.26□□□□□ -1.89
PTR3YFR029W YNL208WP40159 199 aaKnown RBP3.26□□□□□ -1.89
PTR3YFR029W MIC19P43594 170 aa3.26□□□□□ -1.89
PTR3YFR029W AIF1P52923 378 aa3.26□□□□□ -1.89
PTR3YFR029W AIM11P87275 137 aa3.26□□□□□ -1.89
PTR3YFR029W FYV12Q08559 129 aa3.26□□□□□ -1.89
PTR3YFR029W SCP1Q08873 200 aa3.26□□□□□ -1.89
PTR3YFR029W YML100W-AQ8TGT0 57 aa3.26□□□□□ -1.89
PTR3YFR029W RPB5P20434 215 aa3.25□□□□□ -1.89
PTR3YFR029W OM14P38325 134 aa3.25□□□□□ -1.89
PTR3YFR029W AVT2P39981 480 aa3.25□□□□□ -1.89
PTR3YFR029W AVT6P40074 448 aa3.25□□□□□ -1.89
PTR3YFR029W CLD1P53264 445 aa3.25□□□□□ -1.89
PTR3YFR029W VPS28Q02767 242 aa3.25□□□□□ -1.89
PTR3YFR029W RNH202Q05635 350 aa3.25□□□□□ -1.89
PTR3YFR029W YPL247CQ12523 523 aa3.25□□□□□ -1.89
PTR3YFR029W RPL21BQ12672 160 aaKnown RBP3.25□□□□□ -1.89
PTR3YFR029W YLR462WO13556 202 aa3.24□□□□□ -1.89
PTR3YFR029W YLR156WP0CE96 114 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms