RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YBR063CP38083 404 aa2.21□□□□□ -2.06
MSH4YFL003C TRR2P38816 342 aa2.21□□□□□ -2.06
MSH4YFL003C RIO1Q12196 484 aaKnown RBP2.21□□□□□ -2.06
MSH4YFL003C GEP5Q12393 293 aa2.21□□□□□ -2.06
MSH4YFL003C MBF1O14467 151 aaKnown RBP2.2□□□□□ -2.06
MSH4YFL003C RPS24AP0CX31 135 aaKnown RBP2.2□□□□□ -2.06
MSH4YFL003C RPS24BP0CX32 135 aaKnown RBP2.2□□□□□ -2.06
MSH4YFL003C SEC17P32602 292 aa2.2□□□□□ -2.06
MSH4YFL003C COS6P53344 381 aa2.2□□□□□ -2.06
MSH4YFL003C SPC2Q04969 178 aa2.2□□□□□ -2.06
MSH4YFL003C MCH1Q07376 486 aa2.2□□□□□ -2.06
MSH4YFL003C PEX11Q12462 236 aa2.2□□□□□ -2.06
MSH4YFL003C RCN1P36054 211 aa2.2□□□□□ -2.06
MSH4YFL003C COS8P38723 381 aa2.2□□□□□ -2.06
MSH4YFL003C RSM25P40496 264 aa2.2□□□□□ -2.06
MSH4YFL003C YFR045WP43617 309 aa2.2□□□□□ -2.06
MSH4YFL003C MIG2P53035 382 aa2.2□□□□□ -2.06
MSH4YFL003C RSM10Q03201 203 aa2.2□□□□□ -2.06
MSH4YFL003C HPT1Q04178 221 aaKnown RBP2.2□□□□□ -2.06
MSH4YFL003C DYN3Q04949 312 aa2.2□□□□□ -2.06
MSH4YFL003C CMD1P06787 147 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C UBC8P28263 218 aa2.19□□□□□ -2.06
MSH4YFL003C MDH3P32419 343 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
MSH4YFL003C UTP30P36144 274 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C ICE2P40499 491 aa2.19□□□□□ -2.06
MSH4YFL003C MOG1P47123 218 aa2.19□□□□□ -2.06
MSH4YFL003C HSK3P69852 69 aa2.19□□□□□ -2.06
MSH4YFL003C GAS3Q03655 524 aa2.19□□□□□ -2.06
MSH4YFL003C AIM34Q03673 198 aa2.19□□□□□ -2.06
MSH4YFL003C FCF1Q05498 189 aaPredicted RBP2.19□□□□□ -2.06
MSH4YFL003C TOM1Q03280 3268 aa2.19□□□□□ -2.06
MSH4YFL003C RPS19AP07280 144 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C RPS19BP07281 144 aaPredicted RBP2.19□□□□□ -2.06
MSH4YFL003C RPL40AP0CH08 128 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C RPL40BP0CH09 128 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C AGA2P32781 87 aa2.19□□□□□ -2.06
MSH4YFL003C FMP23P38231 175 aa2.19□□□□□ -2.06
MSH4YFL003C GLE2P40066 365 aa2.19□□□□□ -2.06
MSH4YFL003C FIS1P40515 155 aa2.19□□□□□ -2.06
MSH4YFL003C ARP3P47117 449 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C YDR249CQ03787 373 aa2.19□□□□□ -2.06
MSH4YFL003C SHH4Q06236 168 aa2.19□□□□□ -2.06
MSH4YFL003C SUE1Q06524 206 aa2.19□□□□□ -2.06
MSH4YFL003C YPL162CQ12042 273 aa2.19□□□□□ -2.06
MSH4YFL003C EFG1Q3E705 233 aaKnown RBP2.19□□□□□ -2.06
MSH4YFL003C YPR170W-BP0C5R9 85 aa2.18□□□□□ -2.06
MSH4YFL003C PET9P18239 318 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C SEC14P24280 304 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C POP7P38291 140 aa2.18□□□□□ -2.06
MSH4YFL003C POP4P38336 279 aa2.18□□□□□ -2.06
MSH4YFL003C AST2P39945 430 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C SOK1P40317 901 aa2.18□□□□□ -2.06
MSH4YFL003C ARO8P53090 500 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C PLP1Q04004 230 aa2.18□□□□□ -2.06
MSH4YFL003C GPI17Q04080 534 aa2.18□□□□□ -2.06
MSH4YFL003C YPR127WQ06494 345 aa2.18□□□□□ -2.06
MSH4YFL003C IES3Q12345 250 aa2.18□□□□□ -2.06
MSH4YFL003C BBP1Q12365 385 aa2.18□□□□□ -2.06
MSH4YFL003C MHT1Q12525 324 aa2.18□□□□□ -2.06
MSH4YFL003C YFR032C-BQ8TGU2 87 aa2.18□□□□□ -2.06
MSH4YFL003C YCR023CP25351 611 aa2.18□□□□□ -2.06
MSH4YFL003C NUF2P33895 451 aa2.18□□□□□ -2.06
MSH4YFL003C MPA43P53583 542 aaPredicted RBP2.18□□□□□ -2.06
MSH4YFL003C ALG9P53868 555 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C PGA1P53896 198 aa2.18□□□□□ -2.06
MSH4YFL003C HNT1Q04344 158 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C MRX8Q05473 314 aa2.18□□□□□ -2.06
MSH4YFL003C MPD1Q12404 318 aaKnown RBP2.18□□□□□ -2.06
MSH4YFL003C PET54P10834 293 aa2.17□□□□□ -2.06
MSH4YFL003C SCO1P23833 295 aa2.17□□□□□ -2.06
MSH4YFL003C ATG22P25568 528 aa2.17□□□□□ -2.06
MSH4YFL003C YKL102CP34249 101 aa2.17□□□□□ -2.06
MSH4YFL003C YAR068WP39564 161 aa2.17□□□□□ -2.06
MSH4YFL003C YER084WP40057 128 aa2.17□□□□□ -2.06
MSH4YFL003C OST2P46964 130 aa2.17□□□□□ -2.06
MSH4YFL003C SWP1Q02795 286 aa2.17□□□□□ -2.06
MSH4YFL003C YLR031WQ07978 186 aa2.17□□□□□ -2.06
MSH4YFL003C PSF1Q12488 208 aa2.17□□□□□ -2.06
MSH4YFL003C REP2P03872 296 aa2.17□□□□□ -2.06
MSH4YFL003C YLR156WP0CE96 114 aa2.17□□□□□ -2.06
MSH4YFL003C YLR159WP0CE97 114 aa2.17□□□□□ -2.06
MSH4YFL003C YLR161WP0CE98 114 aa2.17□□□□□ -2.06
MSH4YFL003C RPB3P16370 318 aaKnown RBP2.17□□□□□ -2.06
MSH4YFL003C TVP38P36164 337 aa2.17□□□□□ -2.06
MSH4YFL003C SKI6P46948 246 aaPredicted RBP2.17□□□□□ -2.06
MSH4YFL003C ATG39Q06159 398 aa2.17□□□□□ -2.06
MSH4YFL003C DGA1Q08650 418 aa2.17□□□□□ -2.06
MSH4YFL003C MCP1Q12106 302 aa2.17□□□□□ -2.06
MSH4YFL003C RPS23AP0CX29 145 aaKnown RBP2.16□□□□□ -2.06
MSH4YFL003C RPS23BP0CX30 145 aa2.16□□□□□ -2.06
MSH4YFL003C YGP1P38616 354 aaKnown RBP2.16□□□□□ -2.06
MSH4YFL003C PFS2P42841 465 aaKnown RBP2.16□□□□□ -2.06
MSH4YFL003C YJR111CP47148 283 aaKnown RBP2.16□□□□□ -2.06
MSH4YFL003C CAB4P53332 305 aa2.16□□□□□ -2.06
MSH4YFL003C APJ1P53940 528 aa2.16□□□□□ -2.06
MSH4YFL003C MAK3Q03503 176 aa2.16□□□□□ -2.06
MSH4YFL003C RAD10P06838 210 aa2.16□□□□□ -2.06
MSH4YFL003C MRPS28P21771 286 aa2.16□□□□□ -2.06
MSH4YFL003C PRM10P42946 383 aa2.16□□□□□ -2.06
MSH4YFL003C YFL012WP43580 148 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms