RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C NKP2Q06162 153 aa5.16□□□□□ -1.58
SHO1YER118C SMT3Q12306 101 aaKnown RBP5.16□□□□□ -1.58
SHO1YER118C DGK1Q12382 290 aa5.16□□□□□ -1.58
SHO1YER118C DFM1Q12743 341 aaKnown RBP5.16□□□□□ -1.58
SHO1YER118C SHE2P36068 246 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
SHO1YER118C ASP1P38986 381 aaPredicted RBP5.15□□□□□ -1.59
SHO1YER118C IGD1P43598 195 aa5.15□□□□□ -1.59
SHO1YER118C TDA4P47153 279 aa5.15□□□□□ -1.59
SHO1YER118C TTI2P47168 421 aa5.15□□□□□ -1.59
SHO1YER118C PST1Q12355 444 aa5.15□□□□□ -1.59
SHO1YER118C YIR021W-AQ3E739 70 aa5.15□□□□□ -1.59
SHO1YER118C RPB3P16370 318 aaKnown RBP5.14□□□□□ -1.59
SHO1YER118C RSA4P25382 515 aaKnown RBP5.14□□□□□ -1.59
SHO1YER118C SFC1P33303 322 aa5.14□□□□□ -1.59
SHO1YER118C MIG3P39943 394 aa5.14□□□□□ -1.59
SHO1YER118C PGD1P40356 397 aa5.14□□□□□ -1.59
SHO1YER118C YFR054CP43622 192 aa5.14□□□□□ -1.59
SHO1YER118C YDR366CP87287 132 aa5.14□□□□□ -1.59
SHO1YER118C TVP15Q03860 143 aa5.14□□□□□ -1.59
SHO1YER118C LDB18Q07887 179 aa5.14□□□□□ -1.59
SHO1YER118C YOL029CQ08187 201 aa5.14□□□□□ -1.59
SHO1YER118C YPL225WQ08971 146 aaKnown RBP5.14□□□□□ -1.59
SHO1YER118C YPL247CQ12523 523 aa5.14□□□□□ -1.59
SHO1YER118C TY2B-BQ12491 1770 aa5.14□□□□□ -1.59
SHO1YER118C SNQ2P32568 1501 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C GSP1P32835 219 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C GSP2P32836 220 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C YBL059WP34224 193 aa5.13□□□□□ -1.59
SHO1YER118C PAN3P36102 679 aaPredicted RBP5.13□□□□□ -1.59
SHO1YER118C SKG1P36169 355 aa5.13□□□□□ -1.59
SHO1YER118C AVT2P39981 480 aa5.13□□□□□ -1.59
SHO1YER118C RGI1P40043 161 aaPredicted RBP5.13□□□□□ -1.59
SHO1YER118C TIF34P40217 347 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C YIL054WP40524 105 aa5.13□□□□□ -1.59
SHO1YER118C PFS2P42841 465 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C PGU1P47180 361 aa5.13□□□□□ -1.59
SHO1YER118C SCW4P53334 386 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C HHO1P53551 258 aa5.13□□□□□ -1.59
SHO1YER118C SLM2P53955 656 aa5.13□□□□□ -1.59
SHO1YER118C DIG2Q03373 323 aaKnown RBP5.13□□□□□ -1.59
SHO1YER118C ECM19Q06011 112 aa5.13□□□□□ -1.59
SHO1YER118C GEP5Q12393 293 aa5.13□□□□□ -1.59
SHO1YER118C SPP41P38904 1435 aa5.13□□□□□ -1.59
SHO1YER118C TY1B-BRQ12193 1756 aa5.12□□□□□ -1.59
SHO1YER118C TY1B-GR3Q12316 1755 aa5.12□□□□□ -1.59
SHO1YER118C TY1B-ORQ92393 1755 aa5.12□□□□□ -1.59
SHO1YER118C BET1P22804 142 aa5.12□□□□□ -1.59
SHO1YER118C YCR101CP25607 182 aa5.12□□□□□ -1.59
SHO1YER118C ARO2P28777 376 aaKnown RBP5.12□□□□□ -1.59
SHO1YER118C YAR068WP39564 161 aa5.12□□□□□ -1.59
SHO1YER118C AIM2P39721 246 aa5.12□□□□□ -1.59
SHO1YER118C YGR039WP53225 103 aa5.12□□□□□ -1.59
SHO1YER118C NSG1P38837 291 aa5.11□□□□□ -1.59
SHO1YER118C FIP1P45976 327 aa5.11□□□□□ -1.59
SHO1YER118C YGR219WP53307 113 aa5.11□□□□□ -1.59
SHO1YER118C ALG9P53868 555 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C APS2Q00381 147 aa5.11□□□□□ -1.59
SHO1YER118C OSH6Q02201 448 aa5.11□□□□□ -1.59
SHO1YER118C MCP1Q12106 302 aa5.11□□□□□ -1.59
SHO1YER118C FYV7Q12247 151 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-HO13535 1793 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-DR5P0C2I2 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-DR6P0C2I3 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-LR2P0C2I5 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-LR3P0C2I6 1755 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C TY1B-PR1P0C2I9 1755 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C TY1B-PR2P0C2J0 1756 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-PR3P0C2J1 1755 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C TY1B-JR1P47098 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-ML2Q03434 1755 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C TY1B-ER1Q03612 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-ML1Q04711 1755 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C TY1B-GR2Q12269 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-OLQ12273 1755 aa5.11□□□□□ -1.59
SHO1YER118C TY1B-PLQ12414 1755 aaKnown RBP5.11□□□□□ -1.59
SHO1YER118C YEL009C-AA0A023PZF2 135 aa5.1□□□□□ -1.59
SHO1YER118C CDC25P04821 1589 aa5.1□□□□□ -1.59
SHO1YER118C ADH3P07246 375 aaKnown RBP5.1□□□□□ -1.59
SHO1YER118C YLR156WP0CE96 114 aa5.1□□□□□ -1.59
SHO1YER118C YLR159WP0CE97 114 aa5.1□□□□□ -1.59
SHO1YER118C YLR161WP0CE98 114 aa5.1□□□□□ -1.59
SHO1YER118C SPT15P13393 240 aaKnown RBP5.1□□□□□ -1.59
SHO1YER118C CCA1P21269 546 aa5.1□□□□□ -1.59
SHO1YER118C PAN1P32521 1480 aa5.1□□□□□ -1.59
SHO1YER118C RFS1P38234 210 aaKnown RBP5.1□□□□□ -1.59
SHO1YER118C TSC11P40061 1430 aa5.1□□□□□ -1.59
SHO1YER118C FIS1P40515 155 aa5.1□□□□□ -1.59
SHO1YER118C SER2P42941 309 aa5.1□□□□□ -1.59
SHO1YER118C VPS71Q03433 280 aa5.1□□□□□ -1.59
SHO1YER118C SRL1Q08673 210 aa5.1□□□□□ -1.59
SHO1YER118C YDL211CQ12121 372 aa5.1□□□□□ -1.59
SHO1YER118C URA5P13298 226 aaKnown RBP5.09□□□□□ -1.59
SHO1YER118C PHO85P17157 305 aa5.09□□□□□ -1.59
SHO1YER118C RPB9P27999 122 aa5.09□□□□□ -1.59
SHO1YER118C RNP1P32385 249 aa5.09□□□□□ -1.59
SHO1YER118C AYR1P40471 297 aa5.09□□□□□ -1.59
SHO1YER118C CGI121Q03705 181 aaKnown RBP5.09□□□□□ -1.59
SHO1YER118C PPT2Q12036 173 aa5.09□□□□□ -1.59
SHO1YER118C YLR412C-AQ3E742 68 aa5.09□□□□□ -1.59
SHO1YER118C ISD11Q6Q560 94 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms