RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W DOP1Q03921 1698 aa1.7□□□□□ -2.14
RPN9YDR427W VTH1P40438 1549 aa1.7□□□□□ -2.14
RPN9YDR427W VTH2P40890 1549 aa1.7□□□□□ -2.14
RPN9YDR427W YIL177CP40434 1758 aa1.7□□□□□ -2.14
RPN9YDR427W YJL225CP40889 1758 aa1.7□□□□□ -2.14
RPN9YDR427W RPL2AP0CX45 254 aaKnown RBP1.69□□□□□ -2.14
RPN9YDR427W RPL2BP0CX46 254 aaKnown RBP1.69□□□□□ -2.14
RPN9YDR427W MATALPHA2P0CY08 210 aa1.69□□□□□ -2.14
RPN9YDR427W HMLALPHA2P0CY09 210 aa1.69□□□□□ -2.14
RPN9YDR427W CBF1P17106 351 aa1.69□□□□□ -2.14
RPN9YDR427W YBR285WP38354 144 aa1.69□□□□□ -2.14
RPN9YDR427W HMF1P40037 129 aaKnown RBP1.69□□□□□ -2.14
RPN9YDR427W RPL13BP40212 199 aaKnown RBP1.69□□□□□ -2.14
RPN9YDR427W NUP49Q02199 472 aa1.69□□□□□ -2.14
RPN9YDR427W RPL13AQ12690 199 aaPredicted RBP1.69□□□□□ -2.14
RPN9YDR427W TY3B-GQ99315 1547 aa1.69□□□□□ -2.14
RPN9YDR427W CYR1P08678 2026 aaKnown RBP1.69□□□□□ -2.14
RPN9YDR427W CHD1P32657 1468 aa1.69□□□□□ -2.14
RPN9YDR427W BNI1P41832 1953 aa1.68□□□□□ -2.14
RPN9YDR427W IRC20Q06554 1556 aa1.68□□□□□ -2.14
RPN9YDR427W TOP2P06786 1428 aaKnown RBP1.68□□□□□ -2.14
RPN9YDR427W SNQ2P32568 1501 aaKnown RBP1.68□□□□□ -2.14
RPN9YDR427W PDR15Q04182 1529 aaKnown RBP1.68□□□□□ -2.14
RPN9YDR427W SHE2P36068 246 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
RPN9YDR427W ERG10P41338 398 aaKnown RBP1.68□□□□□ -2.14
RPN9YDR427W AIM25P47140 327 aa1.68□□□□□ -2.14
RPN9YDR427W CGR1P53188 120 aa1.68□□□□□ -2.14
RPN9YDR427W POP3P53833 195 aaPredicted RBP1.68□□□□□ -2.14
RPN9YDR427W YDR274CP87283 123 aa1.68□□□□□ -2.14
RPN9YDR427W MRPS17Q03246 237 aaPredicted RBP1.68□□□□□ -2.14
RPN9YDR427W ANT1Q06497 328 aa1.68□□□□□ -2.14
RPN9YDR427W ABP140Q08641 628 aaKnown RBP1.68□□□□□ -2.14
RPN9YDR427W GET4Q12125 312 aa1.68□□□□□ -2.14
RPN9YDR427W ATG40Q99325 256 aa1.68□□□□□ -2.14
RPN9YDR427W MYO4P32492 1471 aa1.68□□□□□ -2.14
RPN9YDR427W MMS22Q06164 1454 aa1.68□□□□□ -2.14
RPN9YDR427W SMC4Q12267 1418 aa1.67□□□□□ -2.14
RPN9YDR427W QCR7P00128 127 aa1.67□□□□□ -2.14
RPN9YDR427W SIR2P06700 562 aa1.67□□□□□ -2.14
RPN9YDR427W CPA1P07258 411 aaKnown RBP1.67□□□□□ -2.14
RPN9YDR427W FPR1P20081 114 aaKnown RBP1.67□□□□□ -2.14
RPN9YDR427W TMA19P35691 167 aaKnown RBP1.67□□□□□ -2.14
RPN9YDR427W YBR209WP38311 105 aa1.67□□□□□ -2.14
RPN9YDR427W GET1P53192 235 aa1.67□□□□□ -2.14
RPN9YDR427W NOP19P53317 196 aaPredicted RBP1.67□□□□□ -2.14
RPN9YDR427W SAY1P53324 424 aa1.67□□□□□ -2.14
RPN9YDR427W CHC1P22137 1653 aaKnown RBP1.67□□□□□ -2.14
RPN9YDR427W IKI3Q06706 1349 aaKnown RBP1.66□□□□□ -2.14
RPN9YDR427W RPL27AP0C2H6 136 aaKnown RBP1.66□□□□□ -2.14
RPN9YDR427W CKS1P20486 150 aaKnown RBP1.66□□□□□ -2.14
RPN9YDR427W TFC1P32367 649 aa1.66□□□□□ -2.14
RPN9YDR427W UBR2Q07963 1872 aa1.66□□□□□ -2.14
RPN9YDR427W GDB1Q06625 1536 aa1.66□□□□□ -2.14
RPN9YDR427W SPP41P38904 1435 aa1.66□□□□□ -2.14
RPN9YDR427W MET5P47169 1442 aa1.66□□□□□ -2.14
RPN9YDR427W YLR236CA0A023PZG4 107 aa1.65□□□□□ -2.15
RPN9YDR427W CNB1P25296 175 aa1.65□□□□□ -2.15
RPN9YDR427W ERJ5P43613 295 aaPredicted RBP1.65□□□□□ -2.15
RPN9YDR427W KNH1P50112 268 aa1.65□□□□□ -2.15
RPN9YDR427W MMS2P53152 137 aa1.65□□□□□ -2.15
RPN9YDR427W HNT1Q04344 158 aaKnown RBP1.65□□□□□ -2.15
RPN9YDR427W VPS15P22219 1454 aa1.64□□□□□ -2.15
RPN9YDR427W NUP159P40477 1460 aa1.64□□□□□ -2.15
RPN9YDR427W MRS1P07266 363 aa1.64□□□□□ -2.15
RPN9YDR427W OCH1P31755 480 aa1.64□□□□□ -2.15
RPN9YDR427W ASF2P32448 525 aaPredicted RBP1.64□□□□□ -2.15
RPN9YDR427W KDX1P36005 433 aa1.64□□□□□ -2.15
RPN9YDR427W VMA22P38784 181 aa1.64□□□□□ -2.15
RPN9YDR427W BUD3P25558 1636 aa1.64□□□□□ -2.15
RPN9YDR427W DNF2Q12675 1612 aa1.64□□□□□ -2.15
RPN9YDR427W TSC11P40061 1430 aa1.64□□□□□ -2.15
RPN9YDR427W ARO1P08566 1588 aaKnown RBP1.64□□□□□ -2.15
RPN9YDR427W YOR093CQ12275 1648 aa1.63□□□□□ -2.15
RPN9YDR427W OPY1P38271 328 aa1.63□□□□□ -2.15
RPN9YDR427W ODC2Q99297 307 aa1.63□□□□□ -2.15
RPN9YDR427W NUP170P38181 1502 aa1.62□□□□□ -2.15
RPN9YDR427W PDR12Q02785 1511 aa1.62□□□□□ -2.15
RPN9YDR427W MBF1O14467 151 aaKnown RBP1.62□□□□□ -2.15
RPN9YDR427W GPA2P10823 449 aa1.62□□□□□ -2.15
RPN9YDR427W MPC3P53311 146 aa1.62□□□□□ -2.15
RPN9YDR427W RIO1Q12196 484 aaKnown RBP1.62□□□□□ -2.15
RPN9YDR427W SNT2P53127 1403 aa1.62□□□□□ -2.15
RPN9YDR427W TRM732Q03496 1420 aa1.62□□□□□ -2.15
RPN9YDR427W PDR10P51533 1564 aa1.62□□□□□ -2.15
RPN9YDR427W VMR1P38735 1592 aa1.61□□□□□ -2.15
RPN9YDR427W SEC11P15367 167 aa1.61□□□□□ -2.15
RPN9YDR427W YPK2P18961 677 aa1.61□□□□□ -2.15
RPN9YDR427W YCR090CP25654 182 aaKnown RBP1.61□□□□□ -2.15
RPN9YDR427W YEA4P40004 342 aa1.61□□□□□ -2.15
RPN9YDR427W YER034WP40022 185 aaKnown RBP1.61□□□□□ -2.15
RPN9YDR427W SKI6P46948 246 aaPredicted RBP1.61□□□□□ -2.15
RPN9YDR427W ARP3P47117 449 aaKnown RBP1.61□□□□□ -2.15
RPN9YDR427W CUE4Q04201 117 aaPredicted RBP1.61□□□□□ -2.15
RPN9YDR427W GEA2P39993 1459 aaKnown RBP1.61□□□□□ -2.15
RPN9YDR427W GCN2P15442 1659 aa1.61□□□□□ -2.15
RPN9YDR427W POR1P04840 283 aaKnown RBP1.6□□□□□ -2.15
RPN9YDR427W QCR8P08525 94 aa1.6□□□□□ -2.15
RPN9YDR427W SPO13P23624 291 aa1.6□□□□□ -2.15
RPN9YDR427W PAN3P36102 679 aaPredicted RBP1.6□□□□□ -2.15
RPN9YDR427W ARO80Q04052 950 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms