RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W YLR126CQ12288 251 aa1.63□□□□□ -2.15
SSF2YDR312W URA2P07259 2214 aaKnown RBP1.63□□□□□ -2.15
SSF2YDR312W THP2O13539 261 aaKnown RBP1.62□□□□□ -2.15
SSF2YDR312W RPL9AP05738 191 aaKnown RBP1.62□□□□□ -2.15
SSF2YDR312W YBR121C-AP0C5L4 52 aa1.62□□□□□ -2.15
SSF2YDR312W MATALPHA1P0CY06 175 aa1.62□□□□□ -2.15
SSF2YDR312W HMLALPHA1P0CY07 175 aa1.62□□□□□ -2.15
SSF2YDR312W NSP1P14907 823 aaKnown RBP1.62□□□□□ -2.15
SSF2YDR312W CDC10P25342 322 aaKnown RBP1.62□□□□□ -2.15
SSF2YDR312W PBN1P25580 416 aa1.62□□□□□ -2.15
SSF2YDR312W YET1P35723 206 aa1.62□□□□□ -2.15
SSF2YDR312W YHR125WP38831 101 aa1.62□□□□□ -2.15
SSF2YDR312W SOK1P40317 901 aa1.62□□□□□ -2.15
SSF2YDR312W APQ12P40532 138 aa1.62□□□□□ -2.15
SSF2YDR312W YIR020CP40575 100 aa1.62□□□□□ -2.15
SSF2YDR312W RPL9BP51401 191 aaKnown RBP1.62□□□□□ -2.15
SSF2YDR312W BRR6P53062 197 aa1.62□□□□□ -2.15
SSF2YDR312W CDC123Q05791 360 aa1.62□□□□□ -2.15
SSF2YDR312W DCR2Q05924 578 aa1.62□□□□□ -2.15
SSF2YDR312W YLR036CQ07986 203 aa1.62□□□□□ -2.15
SSF2YDR312W BBP1Q12365 385 aa1.62□□□□□ -2.15
SSF2YDR312W DCN1Q12395 269 aa1.62□□□□□ -2.15
SSF2YDR312W YSF3P0C074 85 aaPredicted RBP1.61□□□□□ -2.15
SSF2YDR312W SNF6P18888 332 aa1.61□□□□□ -2.15
SSF2YDR312W NTF2P33331 125 aaKnown RBP1.61□□□□□ -2.15
SSF2YDR312W RIB1P38066 345 aa1.61□□□□□ -2.15
SSF2YDR312W YAR068WP39564 161 aa1.61□□□□□ -2.15
SSF2YDR312W CAT5P41735 233 aa1.61□□□□□ -2.15
SSF2YDR312W RPA43P46669 326 aa1.61□□□□□ -2.15
SSF2YDR312W SNX4P47057 423 aa1.61□□□□□ -2.15
SSF2YDR312W DSK2P48510 373 aa1.61□□□□□ -2.15
SSF2YDR312W PRM8P53174 237 aa1.61□□□□□ -2.15
SSF2YDR312W CAB4P53332 305 aa1.61□□□□□ -2.15
SSF2YDR312W YMD8Q03697 442 aa1.61□□□□□ -2.15
SSF2YDR312W RDS3Q06835 107 aaPredicted RBP1.61□□□□□ -2.15
SSF2YDR312W MHT1Q12525 324 aa1.61□□□□□ -2.15
SSF2YDR312W RHO1P06780 209 aaKnown RBP1.6□□□□□ -2.15
SSF2YDR312W DSF1P0CX08 502 aa1.6□□□□□ -2.15
SSF2YDR312W YNR073CP0CX09 502 aa1.6□□□□□ -2.15
SSF2YDR312W URA6P15700 204 aa1.6□□□□□ -2.15
SSF2YDR312W STE18P18852 110 aa1.6□□□□□ -2.15
SSF2YDR312W YMR31P19955 123 aa1.6□□□□□ -2.15
SSF2YDR312W PEX17P40155 199 aa1.6□□□□□ -2.15
SSF2YDR312W FAR7P43592 221 aa1.6□□□□□ -2.15
SSF2YDR312W IRC18P47056 224 aa1.6□□□□□ -2.15
SSF2YDR312W SBH2P52871 88 aa1.6□□□□□ -2.15
SSF2YDR312W CGR1P53188 120 aa1.6□□□□□ -2.15
SSF2YDR312W MPA43P53583 542 aaPredicted RBP1.6□□□□□ -2.15
SSF2YDR312W SLM2P53955 656 aa1.6□□□□□ -2.15
SSF2YDR312W LSM3P57743 89 aaKnown RBP1.6□□□□□ -2.15
SSF2YDR312W BNA7Q04066 261 aa1.6□□□□□ -2.15
SSF2YDR312W RIM9Q04734 239 aa1.6□□□□□ -2.15
SSF2YDR312W YDR278CQ05612 105 aa1.6□□□□□ -2.15
SSF2YDR312W RAF1Q06891 181 aa1.6□□□□□ -2.15
SSF2YDR312W HEM25Q07534 307 aa1.6□□□□□ -2.15
SSF2YDR312W RTR2Q12378 196 aa1.6□□□□□ -2.15
SSF2YDR312W DDP1Q99321 188 aaKnown RBP1.6□□□□□ -2.15
SSF2YDR312W BPH1P25356 2167 aa1.6□□□□□ -2.15
SSF2YDR312W YHR214C-DP0CX93 97 aa1.59□□□□□ -2.15
SSF2YDR312W TRX3P25372 127 aa1.59□□□□□ -2.15
SSF2YDR312W MDH3P32419 343 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
SSF2YDR312W HSP150P32478 413 aa1.59□□□□□ -2.15
SSF2YDR312W YOR062CP36025 268 aa1.59□□□□□ -2.15
SSF2YDR312W MSA2P36157 363 aa1.59□□□□□ -2.15
SSF2YDR312W YBR063CP38083 404 aa1.59□□□□□ -2.15
SSF2YDR312W YBR220CP38318 560 aa1.59□□□□□ -2.15
SSF2YDR312W AYR1P40471 297 aa1.59□□□□□ -2.15
SSF2YDR312W AGE2P40529 298 aa1.59□□□□□ -2.15
SSF2YDR312W ALB1P47019 175 aaPredicted RBP1.59□□□□□ -2.15
SSF2YDR312W YJR146WP47174 117 aa1.59□□□□□ -2.15
SSF2YDR312W NUP57P48837 541 aa1.59□□□□□ -2.15
SSF2YDR312W YNL010WP53981 241 aaKnown RBP1.59□□□□□ -2.15
SSF2YDR312W YLR460CP54007 376 aa1.59□□□□□ -2.15
SSF2YDR312W VPS71Q03433 280 aa1.59□□□□□ -2.15
SSF2YDR312W YMR226CQ05016 267 aaKnown RBP1.59□□□□□ -2.15
SSF2YDR312W ATG39Q06159 398 aa1.59□□□□□ -2.15
SSF2YDR312W YLR179CQ06252 201 aaKnown RBP1.59□□□□□ -2.15
SSF2YDR312W NIP7Q08962 181 aaKnown RBP1.59□□□□□ -2.15
SSF2YDR312W YPR202WQ08993 238 aa1.59□□□□□ -2.15
SSF2YDR312W MSW1P04803 379 aa1.59□□□□□ -2.16
SSF2YDR312W DOA4P32571 926 aa1.59□□□□□ -2.16
SSF2YDR312W VMA11P32842 164 aa1.59□□□□□ -2.16
SSF2YDR312W MIC12P38341 106 aa1.59□□□□□ -2.16
SSF2YDR312W DOG2P38773 246 aa1.59□□□□□ -2.16
SSF2YDR312W PRM10P42946 383 aa1.59□□□□□ -2.16
SSF2YDR312W USB1Q12208 290 aaKnown RBP1.59□□□□□ -2.16
SSF2YDR312W JLP1Q12358 412 aa1.59□□□□□ -2.16
SSF2YDR312W RPL28P02406 149 aaKnown RBP1.58□□□□□ -2.16
SSF2YDR312W FBA1P14540 359 aaKnown RBP1.58□□□□□ -2.16
SSF2YDR312W FCY2P17064 533 aa1.58□□□□□ -2.16
SSF2YDR312W GRX2P17695 143 aaKnown RBP1.58□□□□□ -2.16
SSF2YDR312W MDH2P22133 377 aa1.58□□□□□ -2.16
SSF2YDR312W SEC14P24280 304 aaKnown RBP1.58□□□□□ -2.16
SSF2YDR312W ECM33P38248 429 aaKnown RBP1.58□□□□□ -2.16
SSF2YDR312W AST2P39945 430 aaKnown RBP1.58□□□□□ -2.16
SSF2YDR312W APS3P47064 194 aa1.58□□□□□ -2.16
SSF2YDR312W BXI1P48558 297 aa1.58□□□□□ -2.16
SSF2YDR312W MGA1P53050 456 aa1.58□□□□□ -2.16
SSF2YDR312W TOS8P53147 276 aa1.58□□□□□ -2.16
SSF2YDR312W YGR219WP53307 113 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms