RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC2	YDR180W	IES6	P32617	166 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	MNS1	P32906	549 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	SKN1	P33336	771 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	COS9	P36034	407 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	SHE3	P38272	425 aa	Known RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	SHG1	P38337	142 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	UFE1	P41834	346 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	MCM22	P47167	239 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	TOS2	P50078	622 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	MSO1	P53604	210 aa	Known RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	YNL234W	P53857	426 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	GOT1	Q03554	138 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	HRD1	Q08109	551 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	AAD15	Q08361	143 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YLR112W	Q12130	139 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YOR029W	Q12243	111 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	MHF1	Q3E835	90 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	TIM9	O74700	87 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YCL068C	P25593	260 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	SHE1	P38200	338 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	AME1	P38313	324 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YBR220C	P38318	560 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	MIC12	P38341	106 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YHL044W	P38727	235 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	PHO90	P39535	881 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YEL028W	P39989	153 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	AVT7	P40501	490 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	CAT5	P41735	233 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	LOC1	P43586	204 aa	Predicted RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	ECO1	P43605	281 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	AIM23	P47015	356 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	SAY1	P53324	424 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YLR296W	Q05898	108 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	DGA1	Q08650	418 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	TIR4	Q12218	487 aa	Predicted RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	THP2	O13539	261 aa	Known RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	COX5A	P00424	153 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	HHF1	P02309	103 aa	Known RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	HEM2	P05373	342 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	COX9	P07255	59 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YHR213W	P0CI67	198 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	POP5	P28005	173 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	ARO4	P32449	370 aa	Known RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	YCR041W	P37265	110 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	IML3	P38265	245 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	HPA3	P39979	161 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	XBP1	P40489	647 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	CDC1	P40986	491 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	TIM8	P57744	87 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	CWC27	Q02770	301 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	PIR3	Q03180	325 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	YPR174C	Q06616	221 aa	Predicted RBP	0.86	□□□□□ -2.27
SCC2	YDR180W	RRI1	Q12468	440 aa		0.86	□□□□□ -2.27
SCC2	YDR180W	TPI1	P00942	248 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	RPS16A	P0CX51	143 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	RPS16B	P0CX52	143 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	RBK1	P25332	333 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YCR090C	P25654	182 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	ADE1	P27616	306 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	COX13	P32799	129 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	REC114	P32841	428 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	PAU16	P35994	123 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	BAT1	P38891	393 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	SUR2	P38992	349 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	SNU13	P39990	126 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	LST7	P53237	242 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	PAU12	P53343	120 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	INP1	Q03694	420 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YMR317W	Q04893	1140 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	RRG8	Q06109	277 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	PBP4	Q07362	185 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	RNH203	Q12338	110 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	ATO3	Q12359	275 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	MHF2	Q3E829	80 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	SPS100	P13130	326 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	DAL82	P21705	255 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	MSK1	P32048	576 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	TMA19	P35691	167 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	YBL028C	P38202	106 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YEA6	P39953	335 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	TES1	P41903	349 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	SPG5	P42933	373 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	RIP-Chip
SCC2	YDR180W	LCB3	P47013	409 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	TTI2	P47168	421 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YGL230C	P53074	147 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	IES4	Q08561	116 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	DAP1	Q12091	152 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YCT1	Q12235	531 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YDR262W	Q12331	272 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	PRP46	Q12417	451 aa	Predicted RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	SNF8	Q12483	233 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	ILV1	P00927	576 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	RPL42A	P0CX27	106 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	RPL42B	P0CX28	106 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	CWP1	P28319	239 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	RPA12	P32529	125 aa	Known RBP	0.85	□□□□□ -2.27
SCC2	YDR180W	MID2	P36027	376 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	YBR063C	P38083	404 aa		0.85	□□□□□ -2.27
SCC2	YDR180W	RPF1	P38805	295 aa	Known RBP	0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms