RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W MDM32Q12171 622 aa1.12□□□□□ -2.23
MSH5YDL154W OCA6Q12454 224 aa1.12□□□□□ -2.23
MSH5YDL154W UTR5P32630 166 aa1.11□□□□□ -2.23
MSH5YDL154W CBT1P36038 271 aaPredicted RBP1.11□□□□□ -2.23
MSH5YDL154W MSA2P36157 363 aa1.11□□□□□ -2.23
MSH5YDL154W RMD6P39975 231 aa1.11□□□□□ -2.23
MSH5YDL154W INM2Q05533 292 aa1.11□□□□□ -2.23
MSH5YDL154W RIF1P29539 1916 aa1.11□□□□□ -2.23
MSH5YDL154W YLR462WO13556 202 aa1.11□□□□□ -2.23
MSH5YDL154W FCY2P17064 533 aa1.11□□□□□ -2.23
MSH5YDL154W PBN1P25580 416 aa1.11□□□□□ -2.23
MSH5YDL154W ASF2P32448 525 aaPredicted RBP1.11□□□□□ -2.23
MSH5YDL154W VMA11P32842 164 aa1.11□□□□□ -2.23
MSH5YDL154W RPS1AP33442 255 aaKnown RBP1.11□□□□□ -2.23
MSH5YDL154W UTP30P36144 274 aaKnown RBP1.11□□□□□ -2.23
MSH5YDL154W YPT31P38555 223 aaKnown RBP1.11□□□□□ -2.23
MSH5YDL154W YEL075CP39972 122 aa1.11□□□□□ -2.23
MSH5YDL154W HPM1P40481 377 aa1.11□□□□□ -2.23
MSH5YDL154W ARC15P40518 154 aaRIP-Chip data1.11□□□□□ -2.23 RIP-Chip
MSH5YDL154W CAT5P41735 233 aa1.11□□□□□ -2.23
MSH5YDL154W GLR1P41921 483 aaKnown RBP1.11□□□□□ -2.23
MSH5YDL154W YJL016WP47072 561 aa1.11□□□□□ -2.23
MSH5YDL154W HAM1P47119 197 aaKnown RBP1.11□□□□□ -2.23
MSH5YDL154W PAC10P48363 199 aa1.11□□□□□ -2.23
MSH5YDL154W VMA10P48836 114 aaKnown RBP1.11□□□□□ -2.23
MSH5YDL154W YGR017WP53210 297 aa1.11□□□□□ -2.23
MSH5YDL154W YKR005CQ02203 525 aa1.11□□□□□ -2.23
MSH5YDL154W CWC27Q02770 301 aa1.11□□□□□ -2.23
MSH5YDL154W ARL3Q02804 198 aa1.11□□□□□ -2.23
MSH5YDL154W YMR279CQ03263 540 aa1.11□□□□□ -2.23
MSH5YDL154W YPR174CQ06616 221 aaPredicted RBP1.11□□□□□ -2.23
MSH5YDL154W YOR214CQ12282 236 aa1.11□□□□□ -2.23
MSH5YDL154W JLP1Q12358 412 aa1.11□□□□□ -2.23
MSH5YDL154W AGC1Q12482 902 aa1.11□□□□□ -2.23
MSH5YDL154W MHT1Q12525 324 aa1.11□□□□□ -2.23
MSH5YDL154W YHR213W-AQ8TGT4 77 aa1.11□□□□□ -2.23
MSH5YDL154W SPS2P08459 502 aa1.1□□□□□ -2.23
MSH5YDL154W DSF1P0CX08 502 aa1.1□□□□□ -2.23
MSH5YDL154W YNR073CP0CX09 502 aa1.1□□□□□ -2.23
MSH5YDL154W BUB2P26448 306 aaPredicted RBP1.1□□□□□ -2.23
MSH5YDL154W SUI1P32911 108 aaKnown RBP1.1□□□□□ -2.23
MSH5YDL154W YER084WP40057 128 aa1.1□□□□□ -2.23
MSH5YDL154W YNL194CP40169 301 aa1.1□□□□□ -2.23
MSH5YDL154W MSS2P40990 351 aa1.1□□□□□ -2.23
MSH5YDL154W RPC17P47076 161 aa1.1□□□□□ -2.23
MSH5YDL154W ADO1P47143 340 aaKnown RBP1.1□□□□□ -2.23
MSH5YDL154W MIC26P50087 233 aa1.1□□□□□ -2.23
MSH5YDL154W YGL034CP53186 121 aa1.1□□□□□ -2.23
MSH5YDL154W YGR026WP53217 278 aa1.1□□□□□ -2.23
MSH5YDL154W YNL046WP53956 172 aa1.1□□□□□ -2.23
MSH5YDL154W NHP10Q03435 203 aa1.1□□□□□ -2.23
MSH5YDL154W YML096WQ04489 525 aa1.1□□□□□ -2.23
MSH5YDL154W FAR8Q05040 523 aa1.1□□□□□ -2.23
MSH5YDL154W KIN28P06242 306 aa1.1□□□□□ -2.23
MSH5YDL154W BCY1P07278 416 aaKnown RBP1.1□□□□□ -2.23
MSH5YDL154W TOM40P23644 387 aaKnown RBP1.1□□□□□ -2.23
MSH5YDL154W EHD3P28817 500 aa1.1□□□□□ -2.23
MSH5YDL154W MDH3P32419 343 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
MSH5YDL154W POP4P38336 279 aa1.1□□□□□ -2.23
MSH5YDL154W YHL026CP38740 315 aa1.1□□□□□ -2.23
MSH5YDL154W EGD2P38879 174 aaKnown RBP1.1□□□□□ -2.23
MSH5YDL154W SWM2P40342 146 aa1.1□□□□□ -2.23
MSH5YDL154W GTT1P40582 234 aa1.1□□□□□ -2.23
MSH5YDL154W RAD17P48581 401 aa1.1□□□□□ -2.23
MSH5YDL154W ARO8P53090 500 aaKnown RBP1.1□□□□□ -2.23
MSH5YDL154W SLM2P53955 656 aa1.1□□□□□ -2.23
MSH5YDL154W DIA1P54005 336 aa1.1□□□□□ -2.23
MSH5YDL154W CSN9Q03981 162 aa1.1□□□□□ -2.23
MSH5YDL154W HRT1Q08273 121 aa1.1□□□□□ -2.23
MSH5YDL154W YOR020W-AQ3E824 90 aa1.1□□□□□ -2.23
MSH5YDL154W CDC33P07260 213 aaKnown RBP1.09□□□□□ -2.23
MSH5YDL154W URA6P15700 204 aa1.09□□□□□ -2.23
MSH5YDL154W RPO26P20435 155 aa1.09□□□□□ -2.23
MSH5YDL154W APA2P22108 325 aa1.09□□□□□ -2.23
MSH5YDL154W TCA17P32613 152 aa1.09□□□□□ -2.23
MSH5YDL154W PRP18P33411 251 aaPredicted RBP1.09□□□□□ -2.23
MSH5YDL154W MRPL17P36528 281 aa1.09□□□□□ -2.23
MSH5YDL154W SDH4P37298 181 aa1.09□□□□□ -2.23
MSH5YDL154W MED6P38782 295 aa1.09□□□□□ -2.23
MSH5YDL154W YHR125WP38831 101 aa1.09□□□□□ -2.23
MSH5YDL154W VMA7P39111 118 aa1.09□□□□□ -2.23
MSH5YDL154W SPO73P40031 143 aa1.09□□□□□ -2.23
MSH5YDL154W YGR201CP42936 225 aa1.09□□□□□ -2.23
MSH5YDL154W NUP57P48837 541 aa1.09□□□□□ -2.23
MSH5YDL154W SPC24Q04477 213 aa1.09□□□□□ -2.23
MSH5YDL154W GIM5Q04493 163 aa1.09□□□□□ -2.23
MSH5YDL154W TVP18Q04767 167 aa1.09□□□□□ -2.23
MSH5YDL154W PRP11Q07350 266 aaPredicted RBP1.09□□□□□ -2.23
MSH5YDL154W YLR030WQ07967 263 aa1.09□□□□□ -2.23
MSH5YDL154W Q0144Q9ZZW2 109 aa1.09□□□□□ -2.23
MSH5YDL154W MLP1Q02455 1875 aaKnown RBP1.09□□□□□ -2.23
MSH5YDL154W ARG80P07249 177 aa1.09□□□□□ -2.23
MSH5YDL154W YHR032W-AP0C5N6 59 aa1.09□□□□□ -2.23
MSH5YDL154W YPR170W-BP0C5R9 85 aa1.09□□□□□ -2.23
MSH5YDL154W ATP7P30902 174 aa1.09□□□□□ -2.23
MSH5YDL154W YKL075CP36083 450 aa1.09□□□□□ -2.23
MSH5YDL154W MRPL24P36525 258 aaPredicted RBP1.09□□□□□ -2.23
MSH5YDL154W AME1P38313 324 aa1.09□□□□□ -2.23
MSH5YDL154W AST2P39945 430 aaKnown RBP1.09□□□□□ -2.23
MSH5YDL154W MCM22P47167 239 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms