RNA–Protein interactions for RNA: YCL037C

SRO9, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SRO9, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRO9	YCL037C	AME1	P38313	324 aa		2.69	□□□□□ -1.98
SRO9	YCL037C	NUP49	Q02199	472 aa		2.69	□□□□□ -1.98
SRO9	YCL037C	YOL014W	Q08110	124 aa		2.69	□□□□□ -1.98
SRO9	YCL037C	PEX11	Q12462	236 aa		2.69	□□□□□ -1.98
SRO9	YCL037C	YPR014C	Q6B0W2	109 aa		2.69	□□□□□ -1.98
SRO9	YCL037C	RAS2	P01120	322 aa	Known RBP	2.68	□□□□□ -1.98
SRO9	YCL037C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
SRO9	YCL037C	PAN3	P36102	679 aa	Predicted RBP	2.68	□□□□□ -1.98
SRO9	YCL037C	YHR022C	P38763	256 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	YER134C	P40081	178 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	TMA22	P47089	198 aa	Predicted RBP	2.68	□□□□□ -1.98
SRO9	YCL037C	EAF6	P47128	113 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	YNR077C	P53758	84 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	RGM1	Q00453	211 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	NAT3	Q06504	195 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	CPA1	P07258	411 aa	Known RBP	2.68	□□□□□ -1.98
SRO9	YCL037C	UBC6	P33296	250 aa	Predicted RBP	2.68	□□□□□ -1.98
SRO9	YCL037C	TVP38	P36164	337 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	FCY21	P40039	528 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	YNL217W	P40152	326 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	YJL027C	P47063	138 aa	Predicted RBP	2.68	□□□□□ -1.98
SRO9	YCL037C	DAN1	P47178	298 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	ERG25	P53045	309 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	YML100W-A	Q8TGT0	57 aa		2.68	□□□□□ -1.98
SRO9	YCL037C	YAR023C	D6VPM8	179 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	POR1	P04840	283 aa	Known RBP	2.67	□□□□□ -1.98
SRO9	YCL037C	DDI2	P0CH63	225 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	DDI3	P0CH64	225 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	AVT2	P39981	480 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	MPC3	P53311	146 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	CYT2	Q00873	224 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	PLP1	Q04004	230 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	YLR053C	Q12026	108 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	ATG40	Q99325	256 aa		2.67	□□□□□ -1.98
SRO9	YCL037C	PDR18	P53756	1333 aa		2.66	□□□□□ -1.98
SRO9	YCL037C	CMD1	P06787	147 aa	Known RBP	2.66	□□□□□ -1.98
SRO9	YCL037C	VTC1	P40046	129 aa	RIP-Chip data	2.66	□□□□□ -1.98	not detected
SRO9	YCL037C	YFL019C	P43576	117 aa		2.66	□□□□□ -1.98
SRO9	YCL037C	GPI14	P47088	403 aa	Known RBP	2.66	□□□□□ -1.98
SRO9	YCL037C	HSK3	P69852	69 aa		2.66	□□□□□ -1.98
SRO9	YCL037C	YMR099C	Q03161	297 aa	Known RBP	2.66	□□□□□ -1.98
SRO9	YCL037C	YOR342C	Q12182	319 aa		2.66	□□□□□ -1.98
SRO9	YCL037C	RDI1	Q12434	202 aa		2.66	□□□□□ -1.98
SRO9	YCL037C	YLR412C-A	Q3E742	68 aa		2.66	□□□□□ -1.98
SRO9	YCL037C	NSG1	P38837	291 aa		2.65	□□□□□ -1.99
SRO9	YCL037C	AGE2	P40529	298 aa		2.65	□□□□□ -1.99
SRO9	YCL037C	NSL1	Q12143	216 aa		2.65	□□□□□ -1.99
SRO9	YCL037C	DGK1	Q12382	290 aa		2.65	□□□□□ -1.99
SRO9	YCL037C	SPO13	P23624	291 aa		2.64	□□□□□ -1.99
SRO9	YCL037C	YBR209W	P38311	105 aa		2.64	□□□□□ -1.99
SRO9	YCL037C	MTW1	P39731	289 aa		2.64	□□□□□ -1.99
SRO9	YCL037C	EDC3	P39998	551 aa	Known RBP	2.64	□□□□□ -1.99
SRO9	YCL037C	RFC2	P40348	353 aa		2.64	□□□□□ -1.99
SRO9	YCL037C	VPS71	Q03433	280 aa		2.64	□□□□□ -1.99
SRO9	YCL037C	DER1	P38307	211 aa		2.63	□□□□□ -1.99
SRO9	YCL037C	YFR054C	P43622	192 aa		2.63	□□□□□ -1.99
SRO9	YCL037C	SOL1	P50278	321 aa		2.63	□□□□□ -1.99
SRO9	YCL037C	YLR236C	A0A023PZG4	107 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	FZF1	P32805	299 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	NRG2	P38082	220 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	DSE2	P38844	325 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	GAA1	P39012	614 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	TTI2	P47168	421 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	YGL235W	P53071	178 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	IGO1	P53897	168 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	YDL180W	Q12301	547 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	NUM1	Q00402	2748 aa		2.62	□□□□□ -1.99
SRO9	YCL037C	TIR1	P10863	254 aa		2.61	□□□□□ -1.99
SRO9	YCL037C	FIG1	P38224	298 aa		2.61	□□□□□ -1.99
SRO9	YCL037C	MPA43	P53583	542 aa	Predicted RBP	2.61	□□□□□ -1.99
SRO9	YCL037C	POP3	P53833	195 aa	Predicted RBP	2.61	□□□□□ -1.99
SRO9	YCL037C	SHH3	Q04487	196 aa		2.61	□□□□□ -1.99
SRO9	YCL037C	VMA22	P38784	181 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	YNL200C	P40165	246 aa	Known RBP	2.6	□□□□□ -1.99
SRO9	YCL037C	AYR1	P40471	297 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	YFH7	P43591	353 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	XPT1	P47165	209 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	YMR295C	Q03559	197 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	SML1	Q04964	104 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	DAS2	Q12084	232 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	BOL1	Q3E793	110 aa		2.6	□□□□□ -1.99
SRO9	YCL037C	RPS28B	P0C0X0	67 aa	Known RBP	2.59	□□□□□ -2
SRO9	YCL037C	MDH2	P22133	377 aa		2.59	□□□□□ -2
SRO9	YCL037C	YCR023C	P25351	611 aa		2.59	□□□□□ -2
SRO9	YCL037C	SPC25	P40014	221 aa		2.59	□□□□□ -2
SRO9	YCL037C	ERJ5	P43613	295 aa	Predicted RBP	2.59	□□□□□ -2
SRO9	YCL037C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.59	□□□□□ -2
SRO9	YCL037C	PHO85	P17157	305 aa		2.58	□□□□□ -2
SRO9	YCL037C	TFC1	P32367	649 aa		2.58	□□□□□ -2
SRO9	YCL037C	NSA2	P40078	261 aa	Known RBP	2.58	□□□□□ -2
SRO9	YCL037C	KNH1	P50112	268 aa		2.58	□□□□□ -2
SRO9	YCL037C	TMA20	P89886	181 aa	Predicted RBP	2.58	□□□□□ -2
SRO9	YCL037C	CUE4	Q04201	117 aa	Predicted RBP	2.58	□□□□□ -2
SRO9	YCL037C	FYV12	Q08559	129 aa		2.58	□□□□□ -2
SRO9	YCL037C	YHR086W-A	Q3E746	53 aa		2.58	□□□□□ -2
SRO9	YCL037C	KOG1	P38873	1557 aa		2.57	□□□□□ -2
SRO9	YCL037C	NSP1	P14907	823 aa	Known RBP	2.57	□□□□□ -2
SRO9	YCL037C	IDP1	P21954	428 aa	Known RBP	2.57	□□□□□ -2
SRO9	YCL037C	CSH1	P38287	376 aa		2.57	□□□□□ -2
SRO9	YCL037C	CUP9	P41817	306 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms