RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 EDC4Q6P2E9 1401 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 BIRC5O15392 142 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 WDR36Q8NI36 951 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZNF473Q8WTR7 871 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 VIPAS39Q9H9C1 493 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 AVENQ9NQS1 362 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 RAB6BQ9NRW1 208 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 MAP3K20Q9NYL2 800 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 MCM8Q9UJA3 840 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZMYND8Q9ULU4 1186 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 AP4S1Q9Y587 144 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 NUP160Q12769 1436 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CIAO1O76071 339 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ATP6V1B2P21281 511 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 MDH1P40925 334 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 RGS4P49798 205 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ARMC4Q5T2S8 1044 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 TRIM63Q969Q1 353 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 C6orf62Q9GZU0 229 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 KIAA0232Q92628 1395 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 PPP1R37O75864 691 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 LARGE1O95461 756 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 YWHAQP27348 245 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 SARSP49591 514 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 RESTQ13127 1097 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 HIST2H2ACQ16777 129 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 PROSER3Q2NL68 480 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 HIST2H2AA3Q6FI13 130 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 TMC4Q7Z404 712 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 OR2W6PQ8NHA6 318 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ATL2Q8NHH9 583 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 SLC30A5Q8TAD4 765 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 NSUN6Q8TEA1 469 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 DCAF4Q8WV16 495 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 RNFT2Q96EX2 444 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 SH3GLB2Q9NR46 395 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZSWIM5Q9P217 1185 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CRLS1Q9UJA2 301 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 SNX13Q9Y5W8 968 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 HPGDP15428 266 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CCND1P24385 295 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 HOXA7P31268 230 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 ZNF200P98182 395 aaPredicted RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 KRT76Q01546 638 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 ATP1A4Q13733 1029 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CHI3L2Q15782 390 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 CACHD1Q5VU97 1274 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 TNIP3Q96KP6 325 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 MXD3Q9BW11 206 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 OSBPL6Q9BZF3 934 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 RPRD1BQ9NQG5 326 aaKnown RBP6.27□□□□□ -1.41
RFX3-212ENST00000617270 TBC1D22BQ9NU19 505 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 TRAPPC8Q9Y2L5 1435 aa6.27□□□□□ -1.41
RFX3-212ENST00000617270 FAM196BA6NMK8 535 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 AP3B1O00203 1094 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 P4HA2O15460 535 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 TEX28O15482 410 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 KLHL2O95198 593 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 CTSHP09668 335 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 TYW3Q6IPR3 259 aaKnown RBP6.26□□□□□ -1.41
RFX3-212ENST00000617270 LRRC8DQ7L1W4 858 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 HIC2Q96JB3 615 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 CCT8L2Q96SF2 557 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 TMEM260Q9NX78 707 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 N6AMT1Q9Y5N5 214 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 SYNCRIPO60506 623 aaKnown RBP6.26□□□□□ -1.41
RFX3-212ENST00000617270 CYP7B1O75881 506 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 PRR29P0C7W0 189 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 GPC1P35052 558 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 SERPINB5P36952 375 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 NUP107P57740 925 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 MMRN1Q13201 1228 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 NAA30Q147X3 362 aaPredicted RBP6.26□□□□□ -1.41
RFX3-212ENST00000617270 MAPK11Q15759 364 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
RFX3-212ENST00000617270 DDI1Q8WTU0 396 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 LRRC1Q9BTT6 524 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 GPR63Q9BZJ6 419 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 C2orf40Q9H1Z8 148 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 FANCEQ9HB96 536 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 GJB4Q9NTQ9 266 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 FBXO40Q9UH90 709 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 POLG2Q9UHN1 485 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 HERC5Q9UII4 1024 aaKnown RBP6.26□□□□□ -1.41
RFX3-212ENST00000617270 KLHL20Q9Y2M5 609 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 NEU2Q9Y3R4 380 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 NFICP08651 508 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 CYP2D6P10635 497 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 PHKG2P15735 406 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 COPAP53621 1224 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 TRIQKQ629K1 86 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 FAM117BQ6P1L5 589 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 TTC39CQ8N584 583 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 POMGNT2Q8NAT1 580 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 NACC2Q96BF6 587 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 RNF146Q9NTX7 359 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 CYP39A1Q9NYL5 469 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 APPL1Q9UKG1 709 aa6.26□□□□□ -1.41
RFX3-212ENST00000617270 AGO2Q9UKV8 859 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms