RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 MAFFQ9ULX9 164 aa7.13□□□□□ -1.27
DNMT1-222ENST00000590619 SLC12A7Q9Y666 1083 aa7.13□□□□□ -1.27
DNMT1-222ENST00000590619 TDRD15B5MCY1 1934 aaKnown RBP7.13□□□□□ -1.27
DNMT1-222ENST00000590619 PDCD11Q14690 1871 aaKnown RBP7.13□□□□□ -1.27
DNMT1-222ENST00000590619 TEX51A0A1B0GUA7 166 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 FAM149AA5PLN7 773 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 TTLL13PA6NNM8 815 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 H7C4K7 107 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 CCER2I3L3R5 266 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 HIP1O00291 1037 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 ZBTB39O15060 712 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 TBX3O15119 743 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 TLX3O43711 291 aaPredicted RBP7.12□□□□□ -1.27
DNMT1-222ENST00000590619 ATXN1LP0C7T5 689 aaKnown RBP7.12□□□□□ -1.27
DNMT1-222ENST00000590619 ARSAP15289 507 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 GJA4P35212 333 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 RFC5P40937 340 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 DPP6P42658 865 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 LIFRP42702 1097 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 MCM2P49736 904 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 AMPD2Q01433 879 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 MXD4Q14582 209 aaPredicted RBP7.12□□□□□ -1.27
DNMT1-222ENST00000590619 CRY1Q16526 586 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 MAP7D1Q3KQU3 841 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 CASC1Q6TDU7 716 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 TMEM92Q6UXU6 159 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 NAXDQ8IW45 347 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 ASAP3Q8TDY4 903 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 USP33Q8TEY7 942 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 ACDQ96AP0 544 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 MTA3Q9BTC8 594 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 SEMA4CQ9C0C4 833 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 ZMYND12Q9H0C1 365 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 CRISPLD1Q9H336 500 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 TASP1Q9H6P5 420 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 GOLGA2P5Q9HBQ8 144 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 DNMT3LQ9UJW3 386 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 PCOLCE2Q9UKZ9 415 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 COL12A1Q99715 3063 aa7.12□□□□□ -1.27
DNMT1-222ENST00000590619 CNTNAP5Q8WYK1 1306 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 K7EQS6 105 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 RECQL4O94761 1208 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 SYPP08247 313 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 GABRR2P28476 465 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 HOXD12P35452 270 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 ARL2P36404 184 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 QARSP47897 775 aaKnown RBP7.11□□□□□ -1.27
DNMT1-222ENST00000590619 USP11P51784 963 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 HNRNPUQ00839 825 aaKnown RBP eCLIP7.11□□□□□ -1.27
DNMT1-222ENST00000590619 DUSP4Q13115 394 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 EMC2Q15006 297 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 CTXN3Q4LDR2 81 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 C2orf27AQ580R0 203 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 GLRA4Q5JXX5 417 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 LRRC69Q6ZNQ3 347 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 KRT25Q7Z3Z0 450 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 TTC30AQ86WT1 665 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 FMNL3Q8IVF7 1028 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 NOSTRINQ8IVI9 506 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 CCDC33Q8N5R6 958 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 BEST2Q8NFU1 509 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 TMEM87BQ96K49 555 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 PPP1R10Q96QC0 940 aaKnown RBP7.11□□□□□ -1.27
DNMT1-222ENST00000590619 KIF2CQ99661 725 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 XPNPEP1Q9NQW7 623 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 CIZ1Q9ULV3 898 aaPredicted RBP7.11□□□□□ -1.27
DNMT1-222ENST00000590619 USP20Q9Y2K6 914 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 SLC27A5Q9Y2P5 690 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 PPME1Q9Y570 386 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 PTPRQQ9UMZ3 2332 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 COL6A6A6NMZ7 2263 aa7.11□□□□□ -1.27
DNMT1-222ENST00000590619 PTPRBP23467 1997 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 ADAMTS9Q9P2N4 1935 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 hCG_1984214I3L0E3 225 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 SYN3O14994 580 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 GLRA2P23416 452 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 CSRP3P50461 194 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 EPHB3P54753 998 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 CYP4F8P98187 520 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 CYP4A11Q02928 519 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 ZNF33AQ06730 810 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 SOX4Q06945 474 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-222ENST00000590619 CAPSQ13938 189 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 TFDP1Q14186 410 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 Q4G0T1 1027 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 TAF1BQ53T94 588 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-222ENST00000590619 DBX2Q6ZNG2 339 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 MICU3Q86XE3 530 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 GALNT15Q8N3T1 639 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 ZNF713Q8N859 430 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-222ENST00000590619 RIN3Q8TB24 985 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 SETD7Q8WTS6 366 aaKnown RBP7.1□□□□□ -1.27
DNMT1-222ENST00000590619 USP13Q92995 863 aaPredicted RBP7.1□□□□□ -1.27
DNMT1-222ENST00000590619 CD101Q93033 1021 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 WBP1Q96G27 269 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 UROC1Q96N76 676 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 TBC1D32Q96NH3 1257 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 PGLYRP2Q96PD5 576 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
DNMT1-222ENST00000590619 MTRQ99707 1265 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms