RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	ATP6V1G2	O95670	118 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	SSR1	P43307	286 aa	Known RBP	14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	PTK6	Q13882	451 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	CAPS	Q13938	189 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	NOL9	Q5SY16	702 aa	Known RBP	14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	CPLX4	Q7Z7G2	160 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	PHF13	Q86YI8	300 aa	Predicted RBP	14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	THOC1	Q96FV9	657 aa	Known RBP	14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	PCYT2	Q99447	389 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	IMPG2	Q9BZV3	1241 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	STMN4	Q9H169	189 aa	Predicted RBP	14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	TMEM134	Q9H6X4	195 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	NOD2	Q9HC29	1040 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	AAAS	Q9NRG9	546 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	NRBP2	Q9NSY0	501 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	SCIN	Q9Y6U3	715 aa		14.03	□□□□□ -0.16
CSNK1D-222	ENST00000584377	ADCY3	O60266	1144 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	ATP2C2	O75185	946 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	ATL2	Q8NHH9	583 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	STAMBPL1	Q96FJ0	436 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	ADAM7	Q9H2U9	754 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	BAIAP2L1	Q9UHR4	511 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	CNTN6	Q9UQ52	1028 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	UST	Q9Y2C2	406 aa		14.02	□□□□□ -0.16
CSNK1D-222	ENST00000584377	C5orf60	A6NFR6	353 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TLR3	O15455	904 aa	Known RBP	14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ACSL3	O95573	720 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GJC1	P36383	396 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	STAT5B	P51692	787 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TAS2R40	P59535	323 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MYO1E	Q12965	1108 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KLF1	Q13351	362 aa	Predicted RBP	14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	AUH	Q13825	339 aa	Known RBP	14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TARBP2	Q15633	366 aa	Known RBP	14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LACTB2	Q53H82	288 aa	Predicted RBP	14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PLEKHA7	Q6IQ23	1121 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RHBDF2	Q6PJF5	856 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CHMP6	Q96FZ7	201 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SEC16B	Q96JE7	1060 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DDX23	Q9BUQ8	820 aa	Known RBP	14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	EBF2	Q9HAK2	575 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LCT	P09848	1927 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SSC5D	A1L4H1	1573 aa		14.02	□□□□□ -0.17
CSNK1D-222	ENST00000584377	AP1G2	O75843	785 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ATF2	P15336	505 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	IVD	P26440	423 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CHKA	P35790	457 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ADCY8	P40145	1251 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ITGA8	P53708	1063 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ELF3	P78545	371 aa	Predicted RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	C1QBP	Q07021	282 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZNF568	Q3ZCX4	644 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SH3D19	Q5HYK7	790 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TREML2	Q5T2D2	321 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GKAP1	Q5VSY0	366 aa	Predicted RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LBX2	Q6XYB7	198 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	BZW1	Q7L1Q6	419 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZBTB10	Q96DT7	871 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TCHP	Q9BT92	498 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	HOMER3	Q9NSC5	361 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SH3BP1	Q9Y3L3	701 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	BRCA1	P38398	1863 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TTLL13P	A6NNM8	815 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ENO4	A6NNW6	628 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	VPS41	P49754	854 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	FAM160B1	Q5W0V3	765 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SCARA3	Q6AZY7	606 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PPP1R2P3	Q6NXS1	205 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KATNAL2	Q8IYT4	538 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CACNA2D3	Q8IZS8	1091 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	OSBPL8	Q9BZF1	889 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ROPN1B	Q9BZX4	212 aa	Predicted RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CCDC113	Q9H0I3	377 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ROPN1	Q9HAT0	212 aa	Predicted RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PARVA	Q9NVD7	372 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PPP2R3B	Q9Y5P8	575 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GJB6	O95452	261 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CD58	P19256	250 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DRD4	P21917	467 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TNFSF9	P41273	254 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RBBP5	Q15291	538 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MFSD5	Q6N075	450 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZPBP2	Q6X784	338 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZBTB33	Q86T24	672 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	BRSK2	Q8IWQ3	736 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ATXN2L	Q8WWM7	1075 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PRPF31	Q8WWY3	499 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZNF606	Q8WXB4	792 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	FAM118B	Q9BPY3	351 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TRAIP	Q9BWF2	469 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	INTS9	Q9NV88	658 aa	Known RBP	14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	BTBD7	Q9P203	1132 aa		14.01	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DNAJC8	O75937	253 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SNUPN	O95149	360 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CST3	P01034	146 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TCF7	P36402	384 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CAV1	Q03135	178 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CCNG2	Q16589	344 aa		14	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms