RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W EMC6Q12431 108 aa2.12□□□□□ -2.07
SRL1YOR247W TIM9O74700 87 aa2.11□□□□□ -2.07
SRL1YOR247W RAD51P25454 400 aa2.11□□□□□ -2.07
SRL1YOR247W MDH3P32419 343 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SRL1YOR247W PGD1P40356 397 aa2.11□□□□□ -2.07
SRL1YOR247W HNT1Q04344 158 aaKnown RBP2.11□□□□□ -2.07
SRL1YOR247W GRX8Q05926 109 aa2.11□□□□□ -2.07
SRL1YOR247W RPL35AP0CX84 120 aaKnown RBP2.1□□□□□ -2.07
SRL1YOR247W RPL35BP0CX85 120 aaKnown RBP2.1□□□□□ -2.07
SRL1YOR247W GCY1P14065 312 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SRL1YOR247W YCR090CP25654 182 aaKnown RBP2.1□□□□□ -2.07
SRL1YOR247W MGT1P26188 188 aa2.1□□□□□ -2.07
SRL1YOR247W SNC2P33328 115 aa2.1□□□□□ -2.07
SRL1YOR247W MRPL17P36528 281 aa2.1□□□□□ -2.07
SRL1YOR247W GVP36P40531 326 aaKnown RBP2.1□□□□□ -2.07
SRL1YOR247W FMP32P43557 207 aa2.1□□□□□ -2.07
SRL1YOR247W YIP3P53633 176 aa2.1□□□□□ -2.07
SRL1YOR247W GRE1Q08969 168 aa2.1□□□□□ -2.07
SRL1YOR247W MEI4P29467 408 aa2.09□□□□□ -2.07
SRL1YOR247W ARC19P33204 171 aaKnown RBP2.09□□□□□ -2.07
SRL1YOR247W UMP1P38293 148 aa2.09□□□□□ -2.07
SRL1YOR247W ERV15P38312 142 aa2.09□□□□□ -2.07
SRL1YOR247W ICE2P40499 491 aa2.09□□□□□ -2.07
SRL1YOR247W RPL33BP41056 107 aaKnown RBP2.09□□□□□ -2.07
SRL1YOR247W PRM10P42946 383 aa2.09□□□□□ -2.07
SRL1YOR247W UBC12P52491 188 aa2.09□□□□□ -2.07
SRL1YOR247W DAD3P69850 94 aa2.09□□□□□ -2.07
SRL1YOR247W FKS1P38631 1876 aaKnown RBP2.09□□□□□ -2.08
SRL1YOR247W RPS24AP0CX31 135 aaKnown RBP2.08□□□□□ -2.08
SRL1YOR247W RPS24BP0CX32 135 aaKnown RBP2.08□□□□□ -2.08
SRL1YOR247W SEC14P24280 304 aaKnown RBP2.08□□□□□ -2.08
SRL1YOR247W PEX4P29340 183 aa2.08□□□□□ -2.08
SRL1YOR247W YET1P35723 206 aa2.08□□□□□ -2.08
SRL1YOR247W YOR062CP36025 268 aa2.08□□□□□ -2.08
SRL1YOR247W YHR180WP38868 163 aa2.08□□□□□ -2.08
SRL1YOR247W YKE4P40544 346 aa2.08□□□□□ -2.08
SRL1YOR247W TMA22P47089 198 aaPredicted RBP2.08□□□□□ -2.08
SRL1YOR247W ARP3P47117 449 aaKnown RBP2.08□□□□□ -2.08
SRL1YOR247W JAC1P53193 184 aa2.08□□□□□ -2.08
SRL1YOR247W YLR460CP54007 376 aa2.08□□□□□ -2.08
SRL1YOR247W AIM34Q03673 198 aa2.08□□□□□ -2.08
SRL1YOR247W MRPS8Q03799 155 aa2.08□□□□□ -2.08
SRL1YOR247W DGA1Q08650 418 aa2.08□□□□□ -2.08
SRL1YOR247W YPR014CQ6B0W2 109 aa2.08□□□□□ -2.08
SRL1YOR247W PET9P18239 318 aaKnown RBP2.07□□□□□ -2.08
SRL1YOR247W ATP15P21306 62 aa2.07□□□□□ -2.08
SRL1YOR247W YBR285WP38354 144 aa2.07□□□□□ -2.08
SRL1YOR247W LSM4P40070 187 aaKnown RBP2.07□□□□□ -2.08
SRL1YOR247W SKI6P46948 246 aaPredicted RBP2.07□□□□□ -2.08
SRL1YOR247W ERG25P53045 309 aa2.07□□□□□ -2.08
SRL1YOR247W ARO8P53090 500 aaKnown RBP2.07□□□□□ -2.08
SRL1YOR247W YDR274CP87283 123 aa2.07□□□□□ -2.08
SRL1YOR247W PLP1Q04004 230 aa2.07□□□□□ -2.08
SRL1YOR247W SPG3Q04398 127 aaPredicted RBP2.07□□□□□ -2.08
SRL1YOR247W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SRL1YOR247W YOR283WQ12040 230 aaKnown RBP2.07□□□□□ -2.08
SRL1YOR247W YLR050CQ12155 161 aaKnown RBP2.07□□□□□ -2.08
SRL1YOR247W AHC2P25649 128 aa2.06□□□□□ -2.08
SRL1YOR247W PHO88P38264 188 aaPredicted RBP2.06□□□□□ -2.08
SRL1YOR247W TIR3P40552 269 aa2.06□□□□□ -2.08
SRL1YOR247W DOC1P53068 250 aa2.06□□□□□ -2.08
SRL1YOR247W YNR062CP53748 327 aa2.06□□□□□ -2.08
SRL1YOR247W YNL140CP53910 189 aa2.06□□□□□ -2.08
SRL1YOR247W DYN3Q04949 312 aa2.06□□□□□ -2.08
SRL1YOR247W SHH4Q06236 168 aa2.06□□□□□ -2.08
SRL1YOR247W QCR2P07257 368 aa2.05□□□□□ -2.08
SRL1YOR247W CPA1P07258 411 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W OCH1P31755 480 aa2.05□□□□□ -2.08
SRL1YOR247W RME1P32338 300 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W MAK5P38112 773 aaPredicted RBP2.05□□□□□ -2.08
SRL1YOR247W FES1P38260 290 aa2.05□□□□□ -2.08
SRL1YOR247W AVT2P39981 480 aa2.05□□□□□ -2.08
SRL1YOR247W SER2P42941 309 aa2.05□□□□□ -2.08
SRL1YOR247W EAF6P47128 113 aa2.05□□□□□ -2.08
SRL1YOR247W TDA4P47153 279 aa2.05□□□□□ -2.08
SRL1YOR247W YNL247WP53852 767 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W PGA1P53896 198 aa2.05□□□□□ -2.08
SRL1YOR247W RGM1Q00453 211 aa2.05□□□□□ -2.08
SRL1YOR247W NUP49Q02199 472 aa2.05□□□□□ -2.08
SRL1YOR247W CGI121Q03705 181 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W HPT1Q04178 221 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W YMR315WQ04869 349 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W MPD1Q12404 318 aaKnown RBP2.05□□□□□ -2.08
SRL1YOR247W PEX11Q12462 236 aa2.05□□□□□ -2.08
SRL1YOR247W ODC2Q99297 307 aa2.05□□□□□ -2.08
SRL1YOR247W SCL1P21243 252 aaKnown RBP2.04□□□□□ -2.08
SRL1YOR247W CLG1P35190 452 aa2.04□□□□□ -2.08
SRL1YOR247W YKR041WP36134 250 aa2.04□□□□□ -2.08
SRL1YOR247W SVP26P38869 228 aa2.04□□□□□ -2.08
SRL1YOR247W NVJ1P38881 321 aa2.04□□□□□ -2.08
SRL1YOR247W YEA4P40004 342 aa2.04□□□□□ -2.08
SRL1YOR247W YER076CP40049 302 aa2.04□□□□□ -2.08
SRL1YOR247W YER134CP40081 178 aa2.04□□□□□ -2.08
SRL1YOR247W YNL217WP40152 326 aa2.04□□□□□ -2.08
SRL1YOR247W YJR111CP47148 283 aaKnown RBP2.04□□□□□ -2.08
SRL1YOR247W BRX1Q08235 291 aaKnown RBP2.04□□□□□ -2.08
SRL1YOR247W FSF1Q12029 327 aaKnown RBP2.04□□□□□ -2.08
SRL1YOR247W CMD1P06787 147 aaKnown RBP2.03□□□□□ -2.08
SRL1YOR247W KDX1P36005 433 aa2.03□□□□□ -2.08
SRL1YOR247W SHE2P36068 246 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms