RNA–Protein interactions for RNA: YLR451W

LEU3, Transcript of Zinc-knuckle transcription factor, repressor and activator, yeast

Gene LEU3, Length 2,661 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU3	YLR451W	FES1	P38260	290 aa		1.49	□□□□□ -2.17
LEU3	YLR451W	AIM25	P47140	327 aa		1.49	□□□□□ -2.17
LEU3	YLR451W	YNL140C	P53910	189 aa		1.49	□□□□□ -2.17
LEU3	YLR451W	RPB3	P16370	318 aa	Known RBP	1.49	□□□□□ -2.17
LEU3	YLR451W	YIL001W	P40560	513 aa		1.49	□□□□□ -2.17
LEU3	YLR451W	IRC20	Q06554	1556 aa		1.49	□□□□□ -2.17
LEU3	YLR451W	MSW1	P04803	379 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	UBC8	P28263	218 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	SEC72	P39742	193 aa	Known RBP	1.48	□□□□□ -2.17
LEU3	YLR451W	POG1	P40473	351 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	ARP3	P47117	449 aa	Known RBP	1.48	□□□□□ -2.17
LEU3	YLR451W	AIF1	P52923	378 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	MMS2	P53152	137 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	RRP17	Q04031	235 aa	Predicted RBP	1.48	□□□□□ -2.17
LEU3	YLR451W	DNF1	P32660	1571 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	RPL27B	P0C2H7	136 aa	Known RBP	1.48	□□□□□ -2.17
LEU3	YLR451W	YCR090C	P25654	182 aa	Known RBP	1.48	□□□□□ -2.17
LEU3	YLR451W	PEX4	P29340	183 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	VMA11	P32842	164 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	AGE2	P40529	298 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	YNL184C	P53876	108 aa		1.48	□□□□□ -2.17
LEU3	YLR451W	RPL27A	P0C2H6	136 aa	Known RBP	1.47	□□□□□ -2.17
LEU3	YLR451W	PET9	P18239	318 aa	Known RBP	1.47	□□□□□ -2.17
LEU3	YLR451W	PHO88	P38264	188 aa	Predicted RBP	1.47	□□□□□ -2.17
LEU3	YLR451W	MPC3	P53311	146 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	GPM2	Q12008	311 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	ATO3	Q12359	275 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	YHR086W-A	Q3E746	53 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	PDR18	P53756	1333 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	TIM9	O74700	87 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	ATG22	P25568	528 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.47	□□□□□ -2.17	not detected
LEU3	YLR451W	NRG2	P38082	220 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	JAC1	P53193	184 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	SPC2	Q04969	178 aa		1.47	□□□□□ -2.17
LEU3	YLR451W	NUF2	P33895	451 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	VMA22	P38784	181 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	DAD3	P69850	94 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	SNO1	Q03144	224 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	MHT1	Q12525	324 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	ADH3	P07246	375 aa	Known RBP	1.46	□□□□□ -2.18
LEU3	YLR451W	FBA1	P14540	359 aa	Known RBP	1.46	□□□□□ -2.18
LEU3	YLR451W	SEN2	P16658	377 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	OCH1	P31755	480 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	FIG1	P38224	298 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	YFR054C	P43622	192 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	RIO1	Q12196	484 aa	Known RBP	1.46	□□□□□ -2.18
LEU3	YLR451W	YIL177C	P40434	1758 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	YJL225C	P40889	1758 aa		1.46	□□□□□ -2.18
LEU3	YLR451W	CPA1	P07258	411 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	PUT1	P09368	476 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	MAG1	P22134	296 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	ERV15	P38312	142 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	NQM1	P53228	333 aa	Predicted RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	YLR460C	P54007	376 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	YMD8	Q03697	442 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	SSK2	P53599	1579 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	ACC1	Q00955	2233 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	CLG1	P35190	452 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	VPS51	P36116	164 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	EDC3	P39998	551 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	PGD1	P40356	397 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	GVP36	P40531	326 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	TIR3	P40552	269 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	SKI6	P46948	246 aa	Predicted RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	LSM1	P47017	172 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	YGR219W	P53307	113 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	YDR274C	P87283	123 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	PRM15	Q03262	622 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	SPC24	Q04477	213 aa		1.45	□□□□□ -2.18
LEU3	YLR451W	MYO2	P19524	1574 aa	Known RBP	1.45	□□□□□ -2.18
LEU3	YLR451W	HMF1	P40037	129 aa	Known RBP	1.44	□□□□□ -2.18
LEU3	YLR451W	NRK1	P53915	240 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	NAT3	Q06504	195 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	FSF1	Q12029	327 aa	Known RBP	1.44	□□□□□ -2.18
LEU3	YLR451W	TSC3	Q3E790	80 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	POP7	P38291	140 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	YJR111C	P47148	283 aa	Known RBP	1.44	□□□□□ -2.18
LEU3	YLR451W	RCF2	P53721	224 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	YML108W	Q03759	105 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	YMR315W	Q04869	349 aa	Known RBP	1.44	□□□□□ -2.18
LEU3	YLR451W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	1.44	□□□□□ -2.18	not detected
LEU3	YLR451W	YOR283W	Q12040	230 aa	Known RBP	1.44	□□□□□ -2.18
LEU3	YLR451W	PET20	Q99373	253 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	MDS3	P53094	1487 aa		1.44	□□□□□ -2.18
LEU3	YLR451W	RPL25	P04456	142 aa	Known RBP	1.43	□□□□□ -2.18
LEU3	YLR451W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	1.43	□□□□□ -2.18	not detected
LEU3	YLR451W	BET1	P22804	142 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	ARO7	P32178	256 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	YKR045C	P36138	183 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	UMP1	P38293	148 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	YHR022C	P38763	256 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	TRM5	P38793	499 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	VMA10	P48836	114 aa	Known RBP	1.43	□□□□□ -2.18
LEU3	YLR451W	NOC4	Q06512	552 aa	Predicted RBP	1.43	□□□□□ -2.18
LEU3	YLR451W	QCR2	P07257	368 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	SRP102	P36057	244 aa	Predicted RBP	1.43	□□□□□ -2.18
LEU3	YLR451W	OPY1	P38271	328 aa		1.43	□□□□□ -2.18
LEU3	YLR451W	RPL33B	P41056	107 aa	Known RBP	1.43	□□□□□ -2.18
LEU3	YLR451W	CIS3	P47001	227 aa		1.43	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms