RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C MEH1Q02205 184 aa8.29□□□□□ -1.08
SHB17YKR043C VBA1Q04301 562 aa8.29□□□□□ -1.08
SHB17YKR043C RTT103Q05543 409 aa8.29□□□□□ -1.08
SHB17YKR043C YFH1Q07540 174 aa8.29□□□□□ -1.08
SHB17YKR043C AIR2Q12476 344 aaKnown RBP8.29□□□□□ -1.08
SHB17YKR043C BOL1Q3E793 110 aa8.29□□□□□ -1.08
SHB17YKR043C YCR061WP25639 631 aa8.28□□□□□ -1.08
SHB17YKR043C YBR242WP38331 238 aa8.28□□□□□ -1.08
SHB17YKR043C GPG1P53130 126 aa8.28□□□□□ -1.08
SHB17YKR043C YGR151CP53287 111 aa8.28□□□□□ -1.08
SHB17YKR043C YDL086WQ07505 273 aa8.28□□□□□ -1.08
SHB17YKR043C RPL9AP05738 191 aaKnown RBP8.27□□□□□ -1.09
SHB17YKR043C GRX2P17695 143 aaKnown RBP8.27□□□□□ -1.09
SHB17YKR043C YMR31P19955 123 aa8.27□□□□□ -1.09
SHB17YKR043C TOM40P23644 387 aaKnown RBP8.27□□□□□ -1.09
SHB17YKR043C PRE3P38624 215 aa8.27□□□□□ -1.09
SHB17YKR043C LAG1P38703 411 aa8.27□□□□□ -1.09
SHB17YKR043C PUS4P48567 403 aaKnown RBP8.27□□□□□ -1.09
SHB17YKR043C YIP1P53039 248 aa8.27□□□□□ -1.09
SHB17YKR043C NOP16P40007 231 aaKnown RBP8.26□□□□□ -1.09
SHB17YKR043C IRC24P40580 263 aa8.26□□□□□ -1.09
SHB17YKR043C UBP8P50102 471 aa8.26□□□□□ -1.09
SHB17YKR043C RPL9BP51401 191 aaKnown RBP8.26□□□□□ -1.09
SHB17YKR043C ISU1Q03020 165 aa8.26□□□□□ -1.09
SHB17YKR043C HRD1Q08109 551 aa8.26□□□□□ -1.09
SHB17YKR043C YNG1Q08465 219 aa8.26□□□□□ -1.09
SHB17YKR043C TRM13Q12383 476 aa8.26□□□□□ -1.09
SHB17YKR043C RAD52P06778 471 aaKnown RBP8.25□□□□□ -1.09
SHB17YKR043C YKL102CP34249 101 aa8.25□□□□□ -1.09
SHB17YKR043C YNK1P36010 153 aaKnown RBP8.25□□□□□ -1.09
SHB17YKR043C YCR041WP37265 110 aa8.25□□□□□ -1.09
SHB17YKR043C YFL054CP43549 646 aa8.25□□□□□ -1.09
SHB17YKR043C TAX4P47030 604 aa8.25□□□□□ -1.09
SHB17YKR043C NIF3P53081 288 aa8.25□□□□□ -1.09
SHB17YKR043C MRPS16Q02608 121 aa8.25□□□□□ -1.09
SHB17YKR043C NGL2Q03264 515 aaKnown RBP8.25□□□□□ -1.09
SHB17YKR043C YOL029CQ08187 201 aa8.25□□□□□ -1.09
SHB17YKR043C JID1Q12350 301 aa8.25□□□□□ -1.09
SHB17YKR043C ATG31Q12421 196 aa8.25□□□□□ -1.09
SHB17YKR043C QCR2P07257 368 aa8.24□□□□□ -1.09
SHB17YKR043C MRP17P28778 131 aa8.24□□□□□ -1.09
SHB17YKR043C PSD1P39006 500 aa8.24□□□□□ -1.09
SHB17YKR043C YGR210CP42942 411 aa8.24□□□□□ -1.09
SHB17YKR043C FEX2Q08991 375 aa8.24□□□□□ -1.09
SHB17YKR043C AEP3Q12089 606 aa8.24□□□□□ -1.09
SHB17YKR043C FMP16Q12497 93 aa8.24□□□□□ -1.09
SHB17YKR043C YBR298C-AQ8TGK4 73 aa8.24□□□□□ -1.09
SHB17YKR043C OLE1P21147 510 aaKnown RBP8.23□□□□□ -1.09
SHB17YKR043C RAD23P32628 398 aaKnown RBP8.23□□□□□ -1.09
SHB17YKR043C YHR138CP38841 114 aaPredicted RBP8.23□□□□□ -1.09
SHB17YKR043C TIF11P38912 153 aaKnown RBP8.23□□□□□ -1.09
SHB17YKR043C DID2P69771 204 aa8.23□□□□□ -1.09
SHB17YKR043C VPS63O13549 108 aa8.22□□□□□ -1.09
SHB17YKR043C SRY1P36007 326 aa8.22□□□□□ -1.09
SHB17YKR043C BFR1P38934 470 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
SHB17YKR043C PHM8P40025 321 aa8.22□□□□□ -1.09
SHB17YKR043C YER137CP40083 148 aaKnown RBP8.22□□□□□ -1.09
SHB17YKR043C MCH1Q07376 486 aa8.22□□□□□ -1.09
SHB17YKR043C FEX1Q08913 375 aa8.22□□□□□ -1.09
SHB17YKR043C FEN2P25621 512 aaKnown RBP8.21□□□□□ -1.1
SHB17YKR043C SUA5P32579 426 aa8.21□□□□□ -1.1
SHB17YKR043C WWM1P43582 211 aaKnown RBP8.21□□□□□ -1.1
SHB17YKR043C YDL186WP48568 277 aa8.21□□□□□ -1.1
SHB17YKR043C TPI1P00942 248 aaKnown RBP8.2□□□□□ -1.1
SHB17YKR043C PUT1P09368 476 aa8.2□□□□□ -1.1
SHB17YKR043C PRY2P36110 329 aa8.2□□□□□ -1.1
SHB17YKR043C YKR045CP36138 183 aa8.2□□□□□ -1.1
SHB17YKR043C GLY1P37303 387 aaKnown RBP8.2□□□□□ -1.1
SHB17YKR043C YCT1Q12235 531 aa8.2□□□□□ -1.1
SHB17YKR043C YBR255C-AQ3E776 120 aa8.2□□□□□ -1.1
SHB17YKR043C ARG80P07249 177 aa8.19□□□□□ -1.1
SHB17YKR043C YER190C-BP0CX94 160 aa8.19□□□□□ -1.1
SHB17YKR043C YEL077W-AP0CX95 160 aa8.19□□□□□ -1.1
SHB17YKR043C YGR296C-BP0CX96 160 aa8.19□□□□□ -1.1
SHB17YKR043C YPL283W-BP0CX97 160 aa8.19□□□□□ -1.1
SHB17YKR043C YPR204C-AP0CX98 160 aa8.19□□□□□ -1.1
SHB17YKR043C YFL068WP0CX99 160 aa8.19□□□□□ -1.1
SHB17YKR043C YLL066W-AP0CY00 160 aa8.19□□□□□ -1.1
SHB17YKR043C YLL067W-AP0CY01 160 aa8.19□□□□□ -1.1
SHB17YKR043C ERV15P38312 142 aa8.19□□□□□ -1.1
SHB17YKR043C CRH1P53301 507 aa8.19□□□□□ -1.1
SHB17YKR043C VPS28Q02767 242 aa8.19□□□□□ -1.1
SHB17YKR043C SPG4Q04438 115 aa8.19□□□□□ -1.1
SHB17YKR043C ATG5Q12380 294 aa8.19□□□□□ -1.1
SHB17YKR043C TFB5Q3E7C1 72 aaPredicted RBP8.19□□□□□ -1.1
SHB17YKR043C HTB1P02293 131 aaKnown RBP8.18□□□□□ -1.1
SHB17YKR043C INO2P26798 304 aa8.18□□□□□ -1.1
SHB17YKR043C LSM12P38828 187 aaKnown RBP8.18□□□□□ -1.1
SHB17YKR043C YJL213WP40896 331 aa8.18□□□□□ -1.1
SHB17YKR043C ECM27P47144 725 aa8.18□□□□□ -1.1
SHB17YKR043C FSH2Q05015 223 aa8.18□□□□□ -1.1
SHB17YKR043C PAM18Q07914 168 aa8.18□□□□□ -1.1
SHB17YKR043C ATP16Q12165 160 aa8.18□□□□□ -1.1
SHB17YKR043C HBN1Q96VH4 193 aa8.18□□□□□ -1.1
SHB17YKR043C ATP3P38077 311 aaKnown RBP8.17□□□□□ -1.1
SHB17YKR043C ICS2P38284 255 aa8.17□□□□□ -1.1
SHB17YKR043C YJL163CP46996 555 aa8.17□□□□□ -1.1
SHB17YKR043C YJR012CP47087 207 aa8.17□□□□□ -1.1
SHB17YKR043C ARP3P47117 449 aaKnown RBP8.17□□□□□ -1.1
SHB17YKR043C PRM4Q12498 284 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms