RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W IZH1Q03419 316 aa4.42□□□□□ -1.7
CBF1YJR060W LIP2Q06005 328 aa4.42□□□□□ -1.7
CBF1YJR060W PEX27Q08580 376 aa4.42□□□□□ -1.7
CBF1YJR060W YOR283WQ12040 230 aaKnown RBP4.42□□□□□ -1.7
CBF1YJR060W CRC1Q12289 327 aa4.42□□□□□ -1.7
CBF1YJR060W IES3Q12345 250 aa4.42□□□□□ -1.7
CBF1YJR060W EAF3Q12432 401 aa4.42□□□□□ -1.7
CBF1YJR060W RPL25P04456 142 aaKnown RBP4.41□□□□□ -1.7
CBF1YJR060W RPL15AP05748 204 aaKnown RBP4.41□□□□□ -1.7
CBF1YJR060W URA6P15700 204 aa4.41□□□□□ -1.7
CBF1YJR060W YCR007CP25354 239 aa4.41□□□□□ -1.7
CBF1YJR060W IMP1P28627 190 aa4.41□□□□□ -1.7
CBF1YJR060W ARO4P32449 370 aaKnown RBP4.41□□□□□ -1.7
CBF1YJR060W HYM1P32464 399 aa4.41□□□□□ -1.7
CBF1YJR060W YKL063CP35725 167 aa4.41□□□□□ -1.7
CBF1YJR060W CCS1P40202 249 aaKnown RBP4.41□□□□□ -1.7
CBF1YJR060W YIR020CP40575 100 aa4.41□□□□□ -1.7
CBF1YJR060W RTS2P40962 232 aa4.41□□□□□ -1.7
CBF1YJR060W SER2P42941 309 aa4.41□□□□□ -1.7
CBF1YJR060W GON7P46984 123 aa4.41□□□□□ -1.7
CBF1YJR060W CWC23P52868 283 aaPredicted RBP4.41□□□□□ -1.7
CBF1YJR060W RPL15BP54780 204 aaPredicted RBP4.41□□□□□ -1.7
CBF1YJR060W YPL199CQ08954 240 aa4.41□□□□□ -1.7
CBF1YJR060W FRE8Q12209 686 aa4.41□□□□□ -1.7
CBF1YJR060W YLR108CQ12259 485 aa4.41□□□□□ -1.7
CBF1YJR060W RTR2Q12378 196 aa4.41□□□□□ -1.7
CBF1YJR060W MPD1Q12404 318 aaKnown RBP4.41□□□□□ -1.7
CBF1YJR060W ATG40Q99325 256 aa4.41□□□□□ -1.7
CBF1YJR060W REP2P03872 296 aa4.4□□□□□ -1.71
CBF1YJR060W GDH1P07262 454 aaKnown RBP4.4□□□□□ -1.71
CBF1YJR060W IFM1P25038 676 aa4.4□□□□□ -1.71
CBF1YJR060W VMA5P31412 392 aaKnown RBP4.4□□□□□ -1.71
CBF1YJR060W IES6P32617 166 aa4.4□□□□□ -1.71
CBF1YJR060W SWD2P36104 329 aaPredicted RBP4.4□□□□□ -1.71
CBF1YJR060W PCL7P40186 285 aa4.4□□□□□ -1.71
CBF1YJR060W BMT5P40493 336 aa4.4□□□□□ -1.71
CBF1YJR060W LSM1P47017 172 aaKnown RBP4.4□□□□□ -1.71
CBF1YJR060W YHC3P47040 408 aa4.4□□□□□ -1.71
CBF1YJR060W IRC18P47056 224 aa4.4□□□□□ -1.71
CBF1YJR060W TPN1P53099 579 aa4.4□□□□□ -1.71
CBF1YJR060W KEI1Q06346 221 aa4.4□□□□□ -1.71
CBF1YJR060W IRC25Q07951 179 aa4.4□□□□□ -1.71
CBF1YJR060W YCL048W-AQ2V2Q2 79 aa4.4□□□□□ -1.71
CBF1YJR060W ODC2Q99297 307 aa4.4□□□□□ -1.71
CBF1YJR060W CAP2P13517 287 aa4.39□□□□□ -1.71
CBF1YJR060W SPT14P32363 452 aa4.39□□□□□ -1.71
CBF1YJR060W ECM25P32525 599 aa4.39□□□□□ -1.71
CBF1YJR060W YHK8P38776 514 aa4.39□□□□□ -1.71
CBF1YJR060W PRM5P40476 318 aa4.39□□□□□ -1.71
CBF1YJR060W RPA34P47006 233 aaPredicted RBP4.39□□□□□ -1.71
CBF1YJR060W GWT1P47026 490 aa4.39□□□□□ -1.71
CBF1YJR060W OKP1P53298 406 aa4.39□□□□□ -1.71
CBF1YJR060W UTP15Q04305 513 aaKnown RBP4.39□□□□□ -1.71
CBF1YJR060W YDR114CQ04597 100 aa4.39□□□□□ -1.71
CBF1YJR060W CSI2Q08054 341 aa4.39□□□□□ -1.71
CBF1YJR060W ATX2Q12067 313 aa4.39□□□□□ -1.71
CBF1YJR060W ILV5P06168 395 aaKnown RBP4.38□□□□□ -1.71
CBF1YJR060W PET54P10834 293 aa4.38□□□□□ -1.71
CBF1YJR060W YNK1P36010 153 aaKnown RBP4.38□□□□□ -1.71
CBF1YJR060W YHR122WP38829 231 aa4.38□□□□□ -1.71
CBF1YJR060W HPA3P39979 161 aa4.38□□□□□ -1.71
CBF1YJR060W YER188WP40103 239 aa4.38□□□□□ -1.71
CBF1YJR060W SLM1P40485 686 aa4.38□□□□□ -1.71
CBF1YJR060W CAT5P41735 233 aa4.38□□□□□ -1.71
CBF1YJR060W OTU1P43558 301 aa4.38□□□□□ -1.71
CBF1YJR060W DIE2P50076 525 aa4.38□□□□□ -1.71
CBF1YJR060W YGR042WP53227 271 aa4.38□□□□□ -1.71
CBF1YJR060W FMP48P53233 369 aa4.38□□□□□ -1.71
CBF1YJR060W PRM15Q03262 622 aa4.38□□□□□ -1.71
CBF1YJR060W NOC4Q06512 552 aaPredicted RBP4.38□□□□□ -1.71
CBF1YJR060W PRP11Q07350 266 aaPredicted RBP4.38□□□□□ -1.71
CBF1YJR060W YLR031WQ07978 186 aa4.38□□□□□ -1.71
CBF1YJR060W YDL009CQ12210 107 aa4.38□□□□□ -1.71
CBF1YJR060W MED4Q12343 284 aa4.38□□□□□ -1.71
CBF1YJR060W CDC23P16522 626 aa4.37□□□□□ -1.71
CBF1YJR060W OCH1P31755 480 aa4.37□□□□□ -1.71
CBF1YJR060W VAM7P32912 316 aa4.37□□□□□ -1.71
CBF1YJR060W CTR2P38865 189 aa4.37□□□□□ -1.71
CBF1YJR060W LSM4P40070 187 aaKnown RBP4.37□□□□□ -1.71
CBF1YJR060W PIR5P46999 287 aa4.37□□□□□ -1.71
CBF1YJR060W AIM25P47140 327 aa4.37□□□□□ -1.71
CBF1YJR060W SOL1P50278 321 aa4.37□□□□□ -1.71
CBF1YJR060W ARO8P53090 500 aaKnown RBP4.37□□□□□ -1.71
CBF1YJR060W ALG9P53868 555 aaKnown RBP4.37□□□□□ -1.71
CBF1YJR060W LSM7P53905 115 aaKnown RBP4.37□□□□□ -1.71
CBF1YJR060W BUD25P85052 153 aa4.37□□□□□ -1.71
CBF1YJR060W BBP1Q12365 385 aa4.37□□□□□ -1.71
CBF1YJR060W DGK1Q12382 290 aa4.37□□□□□ -1.71
CBF1YJR060W PET20Q99373 253 aa4.37□□□□□ -1.71
CBF1YJR060W RPL42AP0CX27 106 aaKnown RBP4.36□□□□□ -1.71
CBF1YJR060W RPL42BP0CX28 106 aaKnown RBP4.36□□□□□ -1.71
CBF1YJR060W ATG22P25568 528 aa4.36□□□□□ -1.71
CBF1YJR060W RPB9P27999 122 aa4.36□□□□□ -1.71
CBF1YJR060W ACH1P32316 526 aa4.36□□□□□ -1.71
CBF1YJR060W FMT1P32785 401 aa4.36□□□□□ -1.71
CBF1YJR060W CPR5P35176 225 aa4.36□□□□□ -1.71
CBF1YJR060W MRPL3P36516 390 aa4.36□□□□□ -1.71
CBF1YJR060W MRPL27P36526 146 aaPredicted RBP4.36□□□□□ -1.71
CBF1YJR060W QDR3P38227 689 aa4.36□□□□□ -1.71
CBF1YJR060W TTI2P47168 421 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms