RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W LSM7P53905 115 aaKnown RBP1.34□□□□□ -2.19
RSM28YDR494W YDR274CP87283 123 aa1.34□□□□□ -2.19
RSM28YDR494W PET191Q02772 108 aa1.34□□□□□ -2.19
RSM28YDR494W YFR032C-BQ8TGU2 87 aa1.34□□□□□ -2.19
RSM28YDR494W RPB3P16370 318 aaKnown RBP1.33□□□□□ -2.2
RSM28YDR494W SHE2P36068 246 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
RSM28YDR494W TVP38P36164 337 aa1.33□□□□□ -2.2
RSM28YDR494W TRM5P38793 499 aa1.33□□□□□ -2.2
RSM28YDR494W MDM32Q12171 622 aa1.33□□□□□ -2.2
RSM28YDR494W YDL180WQ12301 547 aa1.33□□□□□ -2.2
RSM28YDR494W YLR236CA0A023PZG4 107 aa1.32□□□□□ -2.2
RSM28YDR494W ARG80P07249 177 aa1.32□□□□□ -2.2
RSM28YDR494W MER1P16523 270 aa1.32□□□□□ -2.2
RSM28YDR494W MAG1P22134 296 aaKnown RBP1.32□□□□□ -2.2
RSM28YDR494W SPS18P32572 300 aa1.32□□□□□ -2.2
RSM28YDR494W CUS2P53830 285 aaPredicted RBP1.32□□□□□ -2.2
RSM28YDR494W PGA2P53903 129 aa1.32□□□□□ -2.2
RSM28YDR494W COG5P53951 403 aa1.32□□□□□ -2.2
RSM28YDR494W BNA7Q04066 261 aa1.32□□□□□ -2.2
RSM28YDR494W RNH1Q04740 348 aa1.32□□□□□ -2.2
RSM28YDR494W CKS1P20486 150 aaKnown RBP1.31□□□□□ -2.2
RSM28YDR494W YER076CP40049 302 aa1.31□□□□□ -2.2
RSM28YDR494W MPA43P53583 542 aaPredicted RBP1.31□□□□□ -2.2
RSM28YDR494W CUE4Q04201 117 aaPredicted RBP1.31□□□□□ -2.2
RSM28YDR494W YOL160WQ08321 113 aa1.31□□□□□ -2.2
RSM28YDR494W GIS3Q12418 502 aa1.31□□□□□ -2.2
RSM28YDR494W SIR2P06700 562 aa1.3□□□□□ -2.2
RSM28YDR494W ATP15P21306 62 aa1.3□□□□□ -2.2
RSM28YDR494W YCR087C-AP37263 153 aa1.3□□□□□ -2.2
RSM28YDR494W IKI1P38874 309 aa1.3□□□□□ -2.2
RSM28YDR494W MSB2P32334 1306 aa1.3□□□□□ -2.2
RSM28YDR494W TAF14P35189 244 aa1.29□□□□□ -2.2
RSM28YDR494W HMF1P40037 129 aaKnown RBP1.29□□□□□ -2.2
RSM28YDR494W UBC7Q02159 165 aa1.29□□□□□ -2.2
RSM28YDR494W YNG1Q08465 219 aa1.29□□□□□ -2.2
RSM28YDR494W RAD28Q12021 506 aa1.29□□□□□ -2.2
RSM28YDR494W RPL27AP0C2H6 136 aaKnown RBP1.28□□□□□ -2.2
RSM28YDR494W OPY1P38271 328 aa1.28□□□□□ -2.2
RSM28YDR494W AIM25P47140 327 aa1.28□□□□□ -2.2
RSM28YDR494W HNT1Q04344 158 aaKnown RBP1.28□□□□□ -2.2
RSM28YDR494W YNL146C-AQ3E7Z1 64 aa1.28□□□□□ -2.2
RSM28YDR494W IKI3Q06706 1349 aaKnown RBP1.27□□□□□ -2.21
RSM28YDR494W HTB1P02293 131 aaKnown RBP1.27□□□□□ -2.21
RSM28YDR494W HTB2P02294 131 aa1.27□□□□□ -2.21
RSM28YDR494W SEC11P15367 167 aa1.27□□□□□ -2.21
RSM28YDR494W RFA3P26755 122 aaKnown RBP1.27□□□□□ -2.21
RSM28YDR494W KDX1P36005 433 aa1.27□□□□□ -2.21
RSM28YDR494W TVP23P38962 199 aa1.27□□□□□ -2.21
RSM28YDR494W RIO2P40160 425 aaKnown RBP1.27□□□□□ -2.21
RSM28YDR494W VMA22P38784 181 aa1.26□□□□□ -2.21
RSM28YDR494W YHR007C-AQ07074 71 aa1.26□□□□□ -2.21
RSM28YDR494W YRA1Q12159 226 aaKnown RBP1.26□□□□□ -2.21
RSM28YDR494W VAR1P02381 398 aa1.25□□□□□ -2.21
RSM28YDR494W CDC36P06100 191 aaPredicted RBP1.25□□□□□ -2.21
RSM28YDR494W NTG1P31378 399 aa1.25□□□□□ -2.21
RSM28YDR494W TIM11P81449 96 aaPredicted RBP1.25□□□□□ -2.21
RSM28YDR494W ODC2Q99297 307 aa1.25□□□□□ -2.21
RSM28YDR494W CBF1P17106 351 aa1.24□□□□□ -2.21
RSM28YDR494W RPB4P20433 221 aaPredicted RBP1.24□□□□□ -2.21
RSM28YDR494W YCR090CP25654 182 aaKnown RBP1.24□□□□□ -2.21
RSM28YDR494W YER034WP40022 185 aaKnown RBP1.24□□□□□ -2.21
RSM28YDR494W GET1P53192 235 aa1.24□□□□□ -2.21
RSM28YDR494W MPC3P53311 146 aa1.24□□□□□ -2.21
RSM28YDR494W RCE1Q03530 315 aa1.24□□□□□ -2.21
RSM28YDR494W YMR226CQ05016 267 aaKnown RBP1.24□□□□□ -2.21
RSM28YDR494W POR1P04840 283 aaKnown RBP1.23□□□□□ -2.21
RSM28YDR494W SPO13P23624 291 aa1.23□□□□□ -2.21
RSM28YDR494W OCH1P31755 480 aa1.23□□□□□ -2.21
RSM28YDR494W PAN3P36102 679 aaPredicted RBP1.23□□□□□ -2.21
RSM28YDR494W ECM4P36156 370 aa1.23□□□□□ -2.21
RSM28YDR494W AIM2P39721 246 aa1.23□□□□□ -2.21
RSM28YDR494W YPL073CP40323 161 aa1.23□□□□□ -2.21
RSM28YDR494W ERG10P41338 398 aaKnown RBP1.23□□□□□ -2.21
RSM28YDR494W ARO8P53090 500 aaKnown RBP1.23□□□□□ -2.21
RSM28YDR494W FUS2Q05670 677 aa1.23□□□□□ -2.21
RSM28YDR494W GGA1Q06336 557 aa1.23□□□□□ -2.21
RSM28YDR494W YPR174CQ06616 221 aaPredicted RBP1.23□□□□□ -2.21
RSM28YDR494W DGA1Q08650 418 aa1.23□□□□□ -2.21
RSM28YDR494W RFC4P40339 323 aaKnown RBP1.22□□□□□ -2.21
RSM28YDR494W FLX1P40464 311 aa1.22□□□□□ -2.21
RSM28YDR494W MBF1O14467 151 aaKnown RBP1.21□□□□□ -2.22
RSM28YDR494W MATALPHA2P0CY08 210 aa1.21□□□□□ -2.22
RSM28YDR494W HMLALPHA2P0CY09 210 aa1.21□□□□□ -2.22
RSM28YDR494W CNB1P25296 175 aa1.21□□□□□ -2.22
RSM28YDR494W EDC3P39998 551 aaKnown RBP1.21□□□□□ -2.22
RSM28YDR494W YEA4P40004 342 aa1.21□□□□□ -2.22
RSM28YDR494W YAE1P47118 141 aaPredicted RBP1.21□□□□□ -2.22
RSM28YDR494W MRPS17Q03246 237 aaPredicted RBP1.21□□□□□ -2.22
RSM28YDR494W MDM35O60200 86 aa1.2□□□□□ -2.22
RSM28YDR494W YKT6P36015 200 aaKnown RBP1.2□□□□□ -2.22
RSM28YDR494W MMS2P53152 137 aa1.2□□□□□ -2.22
RSM28YDR494W CWC27Q02770 301 aa1.2□□□□□ -2.22
RSM28YDR494W GRX3Q03835 250 aa1.2□□□□□ -2.22
RSM28YDR494W MRS1P07266 363 aa1.19□□□□□ -2.22
RSM28YDR494W YEL067CP39978 195 aa1.19□□□□□ -2.22
RSM28YDR494W YER134CP40081 178 aa1.19□□□□□ -2.22
RSM28YDR494W SER2P42941 309 aa1.19□□□□□ -2.22
RSM28YDR494W SKI6P46948 246 aaPredicted RBP1.19□□□□□ -2.22
RSM28YDR494W YNL247WP53852 767 aaKnown RBP1.19□□□□□ -2.22
RSM28YDR494W YMR099CQ03161 297 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms