RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE3, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE3YDR288W GET1P53192 235 aa2.39□□□□□ -2.03
NSE3YDR288W SAY1P53324 424 aa2.39□□□□□ -2.03
NSE3YDR288W COG5P53951 403 aa2.39□□□□□ -2.03
NSE3YDR288W YDR249CQ03787 373 aa2.39□□□□□ -2.03
NSE3YDR288W YOL162WP0CF19 215 aa2.38□□□□□ -2.03
NSE3YDR288W YDR274CP87283 123 aa2.38□□□□□ -2.03
NSE3YDR288W GPM2Q12008 311 aa2.38□□□□□ -2.03
NSE3YDR288W RPB3P16370 318 aaKnown RBP2.37□□□□□ -2.03
NSE3YDR288W RPL27AP0C2H6 136 aaKnown RBP2.36□□□□□ -2.03
NSE3YDR288W YKR045CP36138 183 aa2.36□□□□□ -2.03
NSE3YDR288W YBR285WP38354 144 aa2.36□□□□□ -2.03
NSE3YDR288W GLE2P40066 365 aa2.36□□□□□ -2.03
NSE3YDR288W FSF1Q12029 327 aaKnown RBP2.36□□□□□ -2.03
NSE3YDR288W GAA1P39012 614 aa2.35□□□□□ -2.03
NSE3YDR288W MMS2P53152 137 aa2.35□□□□□ -2.03
NSE3YDR288W ABP140Q08641 628 aaKnown RBP2.35□□□□□ -2.03
NSE3YDR288W PDR18P53756 1333 aa2.35□□□□□ -2.03
NSE3YDR288W IKI3Q06706 1349 aaKnown RBP2.35□□□□□ -2.03
NSE3YDR288W SIR2P06700 562 aa2.34□□□□□ -2.03
NSE3YDR288W YBR209WP38311 105 aa2.34□□□□□ -2.03
NSE3YDR288W FUS2Q05670 677 aa2.34□□□□□ -2.03
NSE3YDR288W CPA1P07258 411 aaKnown RBP2.33□□□□□ -2.04
NSE3YDR288W YER135CP40082 130 aa2.33□□□□□ -2.04
NSE3YDR288W NOP19P53317 196 aaPredicted RBP2.33□□□□□ -2.04
NSE3YDR288W HNT1Q04344 158 aaKnown RBP2.33□□□□□ -2.04
NSE3YDR288W CSI2Q08054 341 aa2.33□□□□□ -2.04
NSE3YDR288W ATP15P21306 62 aa2.32□□□□□ -2.04
NSE3YDR288W TFC1P32367 649 aa2.32□□□□□ -2.04
NSE3YDR288W TMA19P35691 167 aaKnown RBP2.32□□□□□ -2.04
NSE3YDR288W ERJ5P43613 295 aaPredicted RBP2.32□□□□□ -2.04
NSE3YDR288W YNG1Q08465 219 aa2.32□□□□□ -2.04
NSE3YDR288W YCL012CQ8J0M4 134 aa2.32□□□□□ -2.04
NSE3YDR288W ATG40Q99325 256 aa2.32□□□□□ -2.04
NSE3YDR288W YIL177CP40434 1758 aa2.31□□□□□ -2.04
NSE3YDR288W YJL225CP40889 1758 aa2.31□□□□□ -2.04
NSE3YDR288W AIM2P39721 246 aa2.31□□□□□ -2.04
NSE3YDR288W ANT1Q06497 328 aa2.31□□□□□ -2.04
NSE3YDR288W RAD9P14737 1309 aa2.31□□□□□ -2.04
NSE3YDR288W QCR7P00128 127 aa2.3□□□□□ -2.04
NSE3YDR288W SHE2P36068 246 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
NSE3YDR288W YLR162WQ06235 118 aa2.3□□□□□ -2.04
NSE3YDR288W MRS1P07266 363 aa2.29□□□□□ -2.04
NSE3YDR288W YGL010WP25338 174 aa2.29□□□□□ -2.04
NSE3YDR288W YCR090CP25654 182 aaKnown RBP2.29□□□□□ -2.04
NSE3YDR288W GRX3Q03835 250 aa2.29□□□□□ -2.04
NSE3YDR288W YLR236CA0A023PZG4 107 aa2.28□□□□□ -2.04
NSE3YDR288W JIP3O13555 125 aa2.28□□□□□ -2.04
NSE3YDR288W MBF1O14467 151 aaKnown RBP2.28□□□□□ -2.04
NSE3YDR288W YPK2P18961 677 aa2.28□□□□□ -2.04
NSE3YDR288W RPL13BP40212 199 aaKnown RBP2.28□□□□□ -2.04
NSE3YDR288W CUE4Q04201 117 aaPredicted RBP2.28□□□□□ -2.04
NSE3YDR288W RPL13AQ12690 199 aaPredicted RBP2.28□□□□□ -2.04
NSE3YDR288W IGO2Q9P305 131 aa2.28□□□□□ -2.04
NSE3YDR288W QCR8P08525 94 aa2.27□□□□□ -2.05
NSE3YDR288W TVP23P38962 199 aa2.27□□□□□ -2.05
NSE3YDR288W KNH1P50112 268 aa2.27□□□□□ -2.05
NSE3YDR288W GGA1Q06336 557 aa2.27□□□□□ -2.05
NSE3YDR288W GPA2P10823 449 aa2.26□□□□□ -2.05
NSE3YDR288W CNB1P25296 175 aa2.26□□□□□ -2.05
NSE3YDR288W ASF2P32448 525 aaPredicted RBP2.26□□□□□ -2.05
NSE3YDR288W OPY1P38271 328 aa2.26□□□□□ -2.05
NSE3YDR288W YBR220CP38318 560 aa2.26□□□□□ -2.05
NSE3YDR288W ERG10P41338 398 aaKnown RBP2.26□□□□□ -2.05
NSE3YDR288W RIO1Q12196 484 aaKnown RBP2.26□□□□□ -2.05
NSE3YDR288W ODC2Q99297 307 aa2.26□□□□□ -2.05
NSE3YDR288W FPR1P20081 114 aaKnown RBP2.25□□□□□ -2.05
NSE3YDR288W KDX1P36005 433 aa2.25□□□□□ -2.05
NSE3YDR288W PAN3P36102 679 aaPredicted RBP2.25□□□□□ -2.05
NSE3YDR288W POP3P53833 195 aaPredicted RBP2.25□□□□□ -2.05
NSE3YDR288W DGA1Q08650 418 aa2.25□□□□□ -2.05
NSE3YDR288W RAD28Q12021 506 aa2.25□□□□□ -2.05
NSE3YDR288W YDL180WQ12301 547 aa2.25□□□□□ -2.05
NSE3YDR288W OCH1P31755 480 aa2.24□□□□□ -2.05
NSE3YDR288W CAF4P36130 643 aa2.24□□□□□ -2.05
NSE3YDR288W PDS1P40316 373 aaPredicted RBP2.24□□□□□ -2.05
NSE3YDR288W RTC4P53850 401 aa2.24□□□□□ -2.05
NSE3YDR288W GIM3P53900 129 aa2.24□□□□□ -2.05
NSE3YDR288W POR1P04840 283 aaKnown RBP2.23□□□□□ -2.05
NSE3YDR288W RPL2AP0CX45 254 aaKnown RBP2.23□□□□□ -2.05
NSE3YDR288W RPL2BP0CX46 254 aaKnown RBP2.23□□□□□ -2.05
NSE3YDR288W TVP38P36164 337 aa2.23□□□□□ -2.05
NSE3YDR288W YEA4P40004 342 aa2.23□□□□□ -2.05
NSE3YDR288W NUP49Q02199 472 aa2.23□□□□□ -2.05
NSE3YDR288W YLR031WQ07978 186 aa2.23□□□□□ -2.05
NSE3YDR288W BEM2P39960 2167 aaKnown RBP2.23□□□□□ -2.05
NSE3YDR288W ECM4P36156 370 aa2.22□□□□□ -2.05
NSE3YDR288W ARP3P47117 449 aaKnown RBP2.22□□□□□ -2.05
NSE3YDR288W DYN3Q04949 312 aa2.22□□□□□ -2.05
NSE3YDR288W YLR036CQ07986 203 aa2.22□□□□□ -2.05
NSE3YDR288W SNF4P12904 322 aa2.21□□□□□ -2.06
NSE3YDR288W SEC11P15367 167 aa2.21□□□□□ -2.06
NSE3YDR288W UPS2P35200 230 aa2.21□□□□□ -2.06
NSE3YDR288W SER2P42941 309 aa2.21□□□□□ -2.06
NSE3YDR288W HOP2P53187 214 aa2.21□□□□□ -2.06
NSE3YDR288W YNL184CP53876 108 aa2.21□□□□□ -2.06
NSE3YDR288W MZM1Q03429 123 aaPredicted RBP2.21□□□□□ -2.06
NSE3YDR288W YOL014WQ08110 124 aa2.21□□□□□ -2.06
NSE3YDR288W YOL024WQ08172 172 aa2.21□□□□□ -2.06
NSE3YDR288W SPO13P23624 291 aa2.2□□□□□ -2.06
NSE3YDR288W TRX3P25372 127 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 360.8 ms