RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W LAG1P38703 411 aa1.31□□□□□ -2.2
TRM3YDL112W AIM10P39965 576 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W YJL213WP40896 331 aa1.31□□□□□ -2.2
TRM3YDL112W RSM27P53305 110 aa1.31□□□□□ -2.2
TRM3YDL112W RRP17Q04031 235 aaPredicted RBP1.31□□□□□ -2.2
TRM3YDL112W YDR286CQ05530 114 aa1.31□□□□□ -2.2
TRM3YDL112W YOR186WQ08560 144 aa1.31□□□□□ -2.2
TRM3YDL112W YJR112W-AQ3E743 109 aa1.31□□□□□ -2.2
TRM3YDL112W ATG40Q99325 256 aa1.31□□□□□ -2.2
TRM3YDL112W FUS3P16892 353 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W AGA1P32323 725 aa1.31□□□□□ -2.2
TRM3YDL112W SFK1P35735 353 aa1.31□□□□□ -2.2
TRM3YDL112W SSH1P38353 490 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W MDM31P38880 579 aa1.31□□□□□ -2.2
TRM3YDL112W GNA1P43577 159 aaPredicted RBP1.31□□□□□ -2.2
TRM3YDL112W SOL1P50278 321 aa1.31□□□□□ -2.2
TRM3YDL112W VOA1P53262 265 aa1.31□□□□□ -2.2
TRM3YDL112W VAM3Q12241 283 aa1.31□□□□□ -2.2
TRM3YDL112W PDX3P38075 228 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W SYS1P41544 203 aa1.31□□□□□ -2.2
TRM3YDL112W YLR126CQ12288 251 aa1.31□□□□□ -2.2
TRM3YDL112W HUT1Q12520 339 aa1.31□□□□□ -2.2
TRM3YDL112W RPL25P04456 142 aaKnown RBP1.3□□□□□ -2.2
TRM3YDL112W CKA1P15790 372 aa1.3□□□□□ -2.2
TRM3YDL112W PCL1P24867 279 aa1.3□□□□□ -2.2
TRM3YDL112W LSB5P25369 354 aa1.3□□□□□ -2.2
TRM3YDL112W NDC1P32500 655 aa1.3□□□□□ -2.2
TRM3YDL112W PAU24P38155 120 aa1.3□□□□□ -2.2
TRM3YDL112W POP2P39008 433 aa1.3□□□□□ -2.2
TRM3YDL112W AVT6P40074 448 aa1.3□□□□□ -2.2
TRM3YDL112W YRB2P40517 327 aa1.3□□□□□ -2.2
TRM3YDL112W HXT14P42833 540 aa1.3□□□□□ -2.2
TRM3YDL112W YGR042WP53227 271 aa1.3□□□□□ -2.2
TRM3YDL112W HSK3P69852 69 aa1.3□□□□□ -2.2
TRM3YDL112W SRL4Q03085 281 aa1.3□□□□□ -2.2
TRM3YDL112W VBA1Q04301 562 aa1.3□□□□□ -2.2
TRM3YDL112W ATX2Q12067 313 aa1.3□□□□□ -2.2
TRM3YDL112W BOL1Q3E793 110 aa1.3□□□□□ -2.2
TRM3YDL112W YLR365WQ7LIF2 110 aa1.3□□□□□ -2.2
TRM3YDL112W MED11Q99278 115 aa1.3□□□□□ -2.2
TRM3YDL112W CDC31P06704 161 aaKnown RBP1.3□□□□□ -2.2
TRM3YDL112W RPL31BP0C2H9 113 aaKnown RBP1.3□□□□□ -2.2
TRM3YDL112W YHR212W-AP0CX91 67 aa1.3□□□□□ -2.2
TRM3YDL112W AST1P35183 429 aa1.3□□□□□ -2.2
TRM3YDL112W GOS1P38736 223 aa1.3□□□□□ -2.2
TRM3YDL112W YAE1P47118 141 aaPredicted RBP1.3□□□□□ -2.2
TRM3YDL112W VMA10P48836 114 aaKnown RBP1.3□□□□□ -2.2
TRM3YDL112W PXR1P53335 271 aaPredicted RBP1.3□□□□□ -2.2
TRM3YDL112W YDR274CP87283 123 aa1.3□□□□□ -2.2
TRM3YDL112W HRD1Q08109 551 aa1.3□□□□□ -2.2
TRM3YDL112W YOR292CQ08743 309 aa1.3□□□□□ -2.2
TRM3YDL112W TFC7Q12415 435 aa1.3□□□□□ -2.2
TRM3YDL112W UBC8P28263 218 aa1.3□□□□□ -2.2
TRM3YDL112W IKI1P38874 309 aa1.3□□□□□ -2.2
TRM3YDL112W LSM1P47017 172 aaKnown RBP1.3□□□□□ -2.2
TRM3YDL112W CRH1P53301 507 aa1.3□□□□□ -2.2
TRM3YDL112W SAY1P53324 424 aa1.3□□□□□ -2.2
TRM3YDL112W OCA2P53949 197 aa1.3□□□□□ -2.2
TRM3YDL112W YPD1Q07688 167 aa1.3□□□□□ -2.2
TRM3YDL112W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
TRM3YDL112W KIN28P06242 306 aa1.29□□□□□ -2.2
TRM3YDL112W CDC23P16522 626 aa1.29□□□□□ -2.2
TRM3YDL112W RNA14P25298 677 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W NVJ1P38881 321 aa1.29□□□□□ -2.2
TRM3YDL112W YJR012CP47087 207 aa1.29□□□□□ -2.2
TRM3YDL112W ASI3P53983 676 aa1.29□□□□□ -2.2
TRM3YDL112W HEM25Q07534 307 aa1.29□□□□□ -2.2
TRM3YDL112W LOT6Q07923 191 aa1.29□□□□□ -2.2
TRM3YDL112W RFM1Q12192 310 aa1.29□□□□□ -2.2
TRM3YDL112W CPR2P23285 205 aa1.29□□□□□ -2.2
TRM3YDL112W PET18P25362 215 aa1.29□□□□□ -2.2
TRM3YDL112W RPS2P25443 254 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W RIB7P33312 244 aa1.29□□□□□ -2.2
TRM3YDL112W UMP1P38293 148 aa1.29□□□□□ -2.2
TRM3YDL112W FCY21P40039 528 aa1.29□□□□□ -2.2
TRM3YDL112W PDS1P40316 373 aaPredicted RBP1.29□□□□□ -2.2
TRM3YDL112W MSS2P40990 351 aa1.29□□□□□ -2.2
TRM3YDL112W ORM1P53224 222 aa1.29□□□□□ -2.2
TRM3YDL112W HNT1Q04344 158 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W FIT1Q04433 528 aa1.29□□□□□ -2.2
TRM3YDL112W VPS63O13549 108 aa1.29□□□□□ -2.2
TRM3YDL112W OCH1P31755 480 aa1.29□□□□□ -2.2
TRM3YDL112W ARO4P32449 370 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W ERG24P32462 438 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W RAD23P32628 398 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W YHK8P38776 514 aa1.29□□□□□ -2.2
TRM3YDL112W MBB1P39534 108 aa1.29□□□□□ -2.2
TRM3YDL112W COX15P40086 486 aa1.29□□□□□ -2.2
TRM3YDL112W TIR3P40552 269 aa1.29□□□□□ -2.2
TRM3YDL112W FIN1Q03898 291 aa1.29□□□□□ -2.2
TRM3YDL112W YGK3Q12222 375 aaPredicted RBP1.29□□□□□ -2.2
TRM3YDL112W YPR1Q12458 312 aa1.29□□□□□ -2.2
TRM3YDL112W YPR108W-AQ3E7B3 70 aa1.29□□□□□ -2.2
TRM3YDL112W STF2P16965 84 aa1.29□□□□□ -2.2
TRM3YDL112W ALK2P32789 676 aaPredicted RBP1.29□□□□□ -2.2
TRM3YDL112W RPB7P34087 171 aa1.29□□□□□ -2.2
TRM3YDL112W RTT105P40063 208 aa1.29□□□□□ -2.2
TRM3YDL112W RPA34P47006 233 aaPredicted RBP1.29□□□□□ -2.2
TRM3YDL112W ACT1P60010 375 aaKnown RBP1.29□□□□□ -2.2
TRM3YDL112W GRH1Q04410 372 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms